Busch Lab

ZMP

zgc:110030

Ensembl ID:
ENSDARG00000045249
ZFIN ID:
ZDB-GENE-050706-80
Description:
NIF3-like protein 1 [Source:RefSeq peptide;Acc:NP_001025139]
Human Orthologue:
NIF3L1
Human Description:
NIF3 NGG1 interacting factor 3-like 1 (S. pombe) [Source:HGNC Symbol;Acc:13390]
Mouse Orthologue:
Nif3l1
Mouse Description:
Ngg1 interacting factor 3-like 1 (S. pombe) Gene [Source:MGI Symbol;Acc:MGI:1929485]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa13824 Nonsense Available for shipment Available now
sa35188 Nonsense Available for shipment Available now
sa15947 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa13824
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066546 Nonsense 153 347 3 7
ENSDART00000130693 Nonsense 242 425 2 7
Genomic Location (Zv9):
Chromosome 12 (position 4558507)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 3841229
GRCz11 12 3877994
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACACAGGATTGARTTCTCATGCAYGGAYGAYGGAGAASTAARCAGCCTTT[T/A]GGAGCAGCTGAGACACACAGAGGGCAGCGAAACCTTTCAGTGCACTAGAA
Long Flanking Sequence:
GCTAAACTAGGCAGGTTATGGTAATCAGGCAAGTTATTGTGTAATGATGGTTTGTTCTGTAGACTATCAAAAAAATATTGCTTAAAGGGGCTATTAATTTTGACTTTCTTAATTAAGACTTTCTTATATAAATAATAATAAAAAACAAATAAATTAATTAAATTCAAAATAAAAAAAATTTTGATTGTGGAAATCCAGCAAATCAAGCAGGCAGGAGAGTCGTTTAGGATGCTGCTGCAGTTCTAGTTAAATTAAAGCTTATTTTGAAAACTTAAGTTCAGTTTAACGTAAATATCACTGTTGAAGGATGATGATAAAGCGAAATATAGAAAACCTGGCCAGGATGTGCCTTAAAATGAGAACTCATGGTCACCCTGTGCTTGTGTCTTTTTCCACAGGTAGAGGTAAAGTGTCGGTATTAAGTCAAGCAGTCTCTAGCGGTGCACAGAAACACAGGATTGAGTTCTCATGCATGGATGATGGAGAAGTAAACAGCCTTT[T/A]GGAGCAGCTGAGACACACAGAGGGCAGCGAAACCTTTCAGTGCACTAGAATAAAGTGAATATACATAAGCATGCACAATATATTATTTTAGCATTCATATTACAATGTGTGTGCGTGCGCAAAAGACAGAATTATAGCTACACGCTGTGAAAAAATATCTGTAAATTAGCAGTTTTCCATATTTTGAGATTCATGTTTTTATTTTGGGCGAAGCAGTGGTGCTGTGGCCTCACAGCAAGAAGGTCGCTGGTTCGAGCCTCGGCTCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCTGCGTTCGCGTGGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAAGACATGCGGTACAGGTGAATTGGGTAGGCTAAATTGTCCGTAGTGTATGAATGTGTGTGTGGATGTTTCCCAGGTATGGGTTGCGGCTGGAAGAGCATCCGCTGCATAAAAACTTGCTGGAGAAGTTGGCGGTTCATTCCGCTGTGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa35188
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066546 Nonsense 155 347 3 7
ENSDART00000130693 Nonsense 244 425 2 7
Genomic Location (Zv9):
Chromosome 12 (position 4558512)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 3841234
GRCz11 12 3877999
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGATTGAGTTCTCATGCATGGATGATGGAGAAGTAAACAGCCTTTTGGAG[C/T]AGCTGAGACACACAGAGGGCAGCGAAACCTTTCAGTGCACTAGAATAAAG
Long Flanking Sequence:
ACTAGGCAGGTTATGGTAATCAGGCAAGTTATTGTGTAATGATGGTTTGTTCTGTAGACTATCAAAAAAATATTGCTTAAAGGGGCTATTAATTTTGACTTTCTTAATTAAGACTTTCTTATATAAATAATAATAAAAAACAAATAAATTAATTAAATTCAAAATAAAAAAAATTTTGATTGTGGAAATCCAGCAAATCAAGCAGGCAGGAGAGTCGTTTAGGATGCTGCTGCAGTTCTAGTTAAATTAAAGCTTATTTTGAAAACTTAAGTTCAGTTTAACGTAAATATCACTGTTGAAGGATGATGATAAAGCGAAATATAGAAAACCTGGCCAGGATGTGCCTTAAAATGAGAACTCATGGTCACCCTGTGCTTGTGTCTTTTTCCACAGGTAGAGGTAAAGTGTCGGTATTAAGTCAAGCAGTCTCTAGCGGTGCACAGAAACACAGGATTGAGTTCTCATGCATGGATGATGGAGAAGTAAACAGCCTTTTGGAG[C/T]AGCTGAGACACACAGAGGGCAGCGAAACCTTTCAGTGCACTAGAATAAAGTGAATATACATAAGCATGCACAATATATTATTTTAGCATTCATATTACAATGTGTGTGCGTGCGCAAAAGACAGAATTATAGCTACACGCTGTGAAAAAATATCTGTAAATTAGCAGTTTTCCATATTTTGAGATTCATGTTTTTATTTTGGGCGAAGCAGTGGTGCTGTGGCCTCACAGCAAGAAGGTCGCTGGTTCGAGCCTCGGCTCAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCTGCGTTCGCGTGGGTTTCCTCCGGGTGCTCCGGTTTCCCCCACAGTCCAAAGACATGCGGTACAGGTGAATTGGGTAGGCTAAATTGTCCGTAGTGTATGAATGTGTGTGTGGATGTTTCCCAGGTATGGGTTGCGGCTGGAAGAGCATCCGCTGCATAAAAACTTGCTGGAGAAGTTGGCGGTTCATTCCGCTGTGGCGACCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15947
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000066546 Nonsense 284 347 6 7
ENSDART00000130693 Nonsense 373 425 5 7
Genomic Location (Zv9):
Chromosome 12 (position 4565871)
Other Location(s):
Assembly Chromosome Position
GRCz10 12 3848593
GRCz11 12 3885358
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTGCYGGTTCTGGAGCTTCTGTCATACAAGGAGYAACAGCAGACCTCTA[C/A]ATCACTGGTACGTCACAGACATCAAAAAAGSAATTTAYTATCAATTTATA
Long Flanking Sequence:
ATTTTCAGTTTTGGGTGAACTATCCCTTTAGGGCCAATTCAAACCAAGATTAAGCACACAGCACCAATAACCGTAGGATGATAACTGTTTATGAAATGCACACTCTGCAGTTTTTAGGTGATAGAATAATAATTGCATGTTAAATGCACATAGGTATGTGTATTAGATGTTTATTTCTTACAAAAAACAGTTAGCTTTTTTATTCCCTCTTGTATGTTTTAAAAGTTAGAAAGAAATAAAGCTACAATTTTATTTATTCAGAAACTGAAGTAATTAACGAATAAATAATTGTATTGTATTGCATTTAGAGTGATTTTTAAAAGTCTATCTTTGTAATTTCCATTATTTTCATGGCTTTGCGTATTGAATAATAGTCCAGAGTTACATAATCCTCAATAAGCGCATTATTTATGTGATGTTGTAGACTCGATGGTGAAGACGGTTGCAGTGTGTGCCGGTTCTGGAGCTTCTGTCATACAAGGAGTAACAGCAGACCTCTA[C/A]ATCACTGGTACGTCACAGACATCAAAAAAGGAATTTATTATCAATTTATAAGTGATAGAACAACAAATAACAACAGTTCCTAATGCAAACAAACTAGGTGATATTTTAAGGTGTCAGTAGCCTCTTTCACATATATAGACCTTTCCGGAAAATTACTGGCAATTTTCCGGAAAGGTCTATATATACAGTTAAAGTCAGAATTATTAGCCCCCTTGAATTATTTTTTCCCCAATTTCTGTTTAACGGAGGGAAGATTTTTTTTTCAACACATTTCTAAACATAATAGTTTTAATATCTCATTTCTAATAACTGATTTATTTTATCTTTGTCATGATGACAGTAAATAATATTTGACTAGATATTTTTCAAGACACTTCTATACAGCTTAAAGTGACATTTAAAGGCTTAACTAGGTTAATTAGGTTAACTAGGCAGGTTAGGATAATTAGGCAAGTTACTGTATAACGATGGTTTGTTCTGTAGACTATCAAAAATAATTT
Associated Phenotype:
Not determined