ZMP
gcdh
Ensembl ID:
ZFIN ID:
Description:
glutaryl-Coenzyme A dehydrogenase [Source:RefSeq peptide;Acc:NP_957180]
Human Orthologue:
GCDH
Human Description:
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:4189]
Mouse Orthologue:
Gcdh
Mouse Description:
glutaryl-Coenzyme A dehydrogenase Gene [Source:MGI Symbol;Acc:MGI:104541]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa12642 | Essential Splice Site | Available for shipment | Available now |
sa13778 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa12642
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000053864 | Essential Splice Site | 215 | 441 | None | 11 |
ENSDART00000147793 | Essential Splice Site | 215 | 441 | None | 12 |
The following transcripts of ENSDARG00000037057 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 9476764)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 8083898 |
GRCz11 | 6 | 8319437 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATACAACCCCTCCAGCAGAACTTACAGCATCAGTGGGACAAAAACATGG[T/C]AACCATGATGGTAACATGGTGTTCAGTTTGCATTGTCTGGCTTGGAGAGG
Long Flanking Sequence:
CATGCTGTATAATGGTGTTGGGTTGTGACCCTTTTTTTAAGTTTCCAAAAGGTGCATGAAGTTGTTGTTAAACAAAAAACATATGCTGCAAGTGGGTTAGCTTATGCCTTATGAAATGCATTTATGTGTTTTTGTAGCAGAAATATTTAACATTTTTAATTGATAAATGGCAGCTGAATGGCCATTCTCAACAACGTTTTGACTGACCTCTGACACGGCGTAAGATGGCATTGTAACGCTAAGCCAACTAGTTTTCTTGTTCACCATTGTCTTCTGTGGTAAAACAAACTGTGATTAGCAGGGGAATATTATTCTTTCTTTTTTTTTAGTTTTCTTGTTTTTAATTGTGTGCTTGTTATTTTTTTCCAGCTCGTGGAGAGATTCTGGGCTGTTTTGGTCTAACAGAACCAAACCACGGAAGTGACCCCGCTGGAATGGAGACTAAAGCCAAATACAACCCCTCCAGCAGAACTTACAGCATCAGTGGGACAAAAACATGG[T/C]AACCATGATGGTAACATGGTGTTCAGTTTGCATTGTCTGGCTTGGAGAGGCCTTGGATTTTGTCATTAGTTTATATAATGTCTTTACTTTAAATTATATTATAATTATATATTTTAATTATATGTAAATATTTTATATGTGGTATAAGTATTATTTTAATATTTATTTTTTACCTTTATAGGTTTTAATTATATATATTTATTTATCTATATATATATATTTTTCATATTCTTTTTTGTAGTTTTGTGCATATATTAAAATAATTTTTAAAACACGTTCGTGTATATATCATATTTTAAAAAGAATTATTAAAAAAAGAATGTTATTTATTAATTATTTATTAATAATAATAATTATTAATAATAATAATAAGAAGTATTGATAGGCAATACAATAAATGTGATAGTTAGGGTATAATGACACACTCTTTAAGTGCATCATTGATTTTGTAACTGAGATTAGTGAAGTTGCACAACATGTCATGAAGGTCAGTTCAGACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13778
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000053864 | Nonsense | 351 | 441 | 9 | 11 |
ENSDART00000147793 | Nonsense | 351 | 441 | 10 | 12 |
The following transcripts of ENSDARG00000037057 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 9472528)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 8088134 |
GRCz11 | 6 | 8323673 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATCCAGAAGAAGATGGCAGACATGCTGACAGAAATTACAATCGGCCTG[C/T]AGTCCTGTTTACAACTGGGCAGACTCATTGACCAAAAAAAGTGAGTCCTC
Long Flanking Sequence:
TTCTGTAGGGGCCCTTTGGCTGCCTGAATAATGCCCGCTTTGGCATTGCGTGGGGCGCTCTGGGTGCTGCTGAATTTTGTTTCCATGCTGCTCGTCAGTACACCATGGACAGGTGAGCAGCATCATCTTATCAGTGTAATATTAATAGTCATTACATCAGAAGTAATTAAAGTATATTCGTAAATGGTATAATTGTATTTCCATATTCATGATTTGTCAAATTATGAGCACAATCAAAACGACTTGTTATTCATCAAGTAACATTTTGTATTATTATGTAATGCTGCAAACAGTTGTGCTGCTTAATTTCATTAGGATTATTTGATAGGCTTTTTTTGAACAGGATTTATTTTGAAATAGAACTGCTGTATAACATTTCCCCCTTTTTTTATTTGTGGATGGTTTTATTATATAGAATCCAGTTTGGCGTCCCTCTCGCCAGAAACCAACTCATCCAGAAGAAGATGGCAGACATGCTGACAGAAATTACAATCGGCCTG[C/T]AGTCCTGTTTACAACTGGGCAGACTCATTGACCAAAAAAAGTGAGTCCTCCATCTTACCTACTGTTGAAGTCAGAGTTATAAGCCCTCCTGAATTATAATCCCCCCGTTATATTTTCCCCCAATTTCTGTTTAGCAGAAATCAACACATTTCTAAACATAATAGATTTAATAACTAATTTCTAATAACTGATTTTGTTTCTCTTTGCCATGATGACAGTCCGTAATATTTCACTAGATACAATTTAAATGCAATTTTTAAGGCTTAACTAGGTTAATTAGGCAAGTTAAGGTAATTACGCAGGTCATTGTATAACCTCATTAGACAATTGTCATTACACAATCAAAAAAAAATAATCGGATAATAATATTGACCTTAAAATATAAAAAGTAAAAATAAAAACTAGCAATTCAAGCCGAAATAAAACAAACAAGATTTTCTCCAGAAGAAAACGTATAGGAAATACTGTGAACATTTCCTTGCTCTGTTAAACATTCATTC
Associated Phenotype:
Not determined