Busch Lab

ZMP

gcdh

Ensembl ID:
ENSDARG00000037057
ZFIN ID:
ZDB-GENE-040426-1855
Description:
glutaryl-Coenzyme A dehydrogenase [Source:RefSeq peptide;Acc:NP_957180]
Human Orthologue:
GCDH
Human Description:
glutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:4189]
Mouse Orthologue:
Gcdh
Mouse Description:
glutaryl-Coenzyme A dehydrogenase Gene [Source:MGI Symbol;Acc:MGI:104541]

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa12642 Essential Splice Site Available for shipment Available now
sa13778 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa12642
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000053864 Essential Splice Site 215 441 None 11
ENSDART00000147793 Essential Splice Site 215 441 None 12

The following transcripts of ENSDARG00000037057 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 6 (position 9476764)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 8083898
GRCz11 6 8319437
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATACAACCCCTCCAGCAGAACTTACAGCATCAGTGGGACAAAAACATGG[T/C]AACCATGATGGTAACATGGTGTTCAGTTTGCATTGTCTGGCTTGGAGAGG
Long Flanking Sequence:
CATGCTGTATAATGGTGTTGGGTTGTGACCCTTTTTTTAAGTTTCCAAAAGGTGCATGAAGTTGTTGTTAAACAAAAAACATATGCTGCAAGTGGGTTAGCTTATGCCTTATGAAATGCATTTATGTGTTTTTGTAGCAGAAATATTTAACATTTTTAATTGATAAATGGCAGCTGAATGGCCATTCTCAACAACGTTTTGACTGACCTCTGACACGGCGTAAGATGGCATTGTAACGCTAAGCCAACTAGTTTTCTTGTTCACCATTGTCTTCTGTGGTAAAACAAACTGTGATTAGCAGGGGAATATTATTCTTTCTTTTTTTTTAGTTTTCTTGTTTTTAATTGTGTGCTTGTTATTTTTTTCCAGCTCGTGGAGAGATTCTGGGCTGTTTTGGTCTAACAGAACCAAACCACGGAAGTGACCCCGCTGGAATGGAGACTAAAGCCAAATACAACCCCTCCAGCAGAACTTACAGCATCAGTGGGACAAAAACATGG[T/C]AACCATGATGGTAACATGGTGTTCAGTTTGCATTGTCTGGCTTGGAGAGGCCTTGGATTTTGTCATTAGTTTATATAATGTCTTTACTTTAAATTATATTATAATTATATATTTTAATTATATGTAAATATTTTATATGTGGTATAAGTATTATTTTAATATTTATTTTTTACCTTTATAGGTTTTAATTATATATATTTATTTATCTATATATATATATTTTTCATATTCTTTTTTGTAGTTTTGTGCATATATTAAAATAATTTTTAAAACACGTTCGTGTATATATCATATTTTAAAAAGAATTATTAAAAAAAGAATGTTATTTATTAATTATTTATTAATAATAATAATTATTAATAATAATAATAAGAAGTATTGATAGGCAATACAATAAATGTGATAGTTAGGGTATAATGACACACTCTTTAAGTGCATCATTGATTTTGTAACTGAGATTAGTGAAGTTGCACAACATGTCATGAAGGTCAGTTCAGACA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13778
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000053864 Nonsense 351 441 9 11
ENSDART00000147793 Nonsense 351 441 10 12

The following transcripts of ENSDARG00000037057 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 6 (position 9472528)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 8088134
GRCz11 6 8323673
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATCCAGAAGAAGATGGCAGACATGCTGACAGAAATTACAATCGGCCTG[C/T]AGTCCTGTTTACAACTGGGCAGACTCATTGACCAAAAAAAGTGAGTCCTC
Long Flanking Sequence:
TTCTGTAGGGGCCCTTTGGCTGCCTGAATAATGCCCGCTTTGGCATTGCGTGGGGCGCTCTGGGTGCTGCTGAATTTTGTTTCCATGCTGCTCGTCAGTACACCATGGACAGGTGAGCAGCATCATCTTATCAGTGTAATATTAATAGTCATTACATCAGAAGTAATTAAAGTATATTCGTAAATGGTATAATTGTATTTCCATATTCATGATTTGTCAAATTATGAGCACAATCAAAACGACTTGTTATTCATCAAGTAACATTTTGTATTATTATGTAATGCTGCAAACAGTTGTGCTGCTTAATTTCATTAGGATTATTTGATAGGCTTTTTTTGAACAGGATTTATTTTGAAATAGAACTGCTGTATAACATTTCCCCCTTTTTTTATTTGTGGATGGTTTTATTATATAGAATCCAGTTTGGCGTCCCTCTCGCCAGAAACCAACTCATCCAGAAGAAGATGGCAGACATGCTGACAGAAATTACAATCGGCCTG[C/T]AGTCCTGTTTACAACTGGGCAGACTCATTGACCAAAAAAAGTGAGTCCTCCATCTTACCTACTGTTGAAGTCAGAGTTATAAGCCCTCCTGAATTATAATCCCCCCGTTATATTTTCCCCCAATTTCTGTTTAGCAGAAATCAACACATTTCTAAACATAATAGATTTAATAACTAATTTCTAATAACTGATTTTGTTTCTCTTTGCCATGATGACAGTCCGTAATATTTCACTAGATACAATTTAAATGCAATTTTTAAGGCTTAACTAGGTTAATTAGGCAAGTTAAGGTAATTACGCAGGTCATTGTATAACCTCATTAGACAATTGTCATTACACAATCAAAAAAAAATAATCGGATAATAATATTGACCTTAAAATATAAAAAGTAAAAATAAAAACTAGCAATTCAAGCCGAAATAAAACAAACAAGATTTTCTCCAGAAGAAAACGTATAGGAAATACTGTGAACATTTCCTTGCTCTGTTAAACATTCATTC
Associated Phenotype:
Not determined