ZMP
nr6a1b
Ensembl ID:
ZFIN ID:
Description:
Nuclear receptor subfamily 6 group A member 1-B [Source:UniProtKB/Swiss-Prot;Acc:Q4V8R7]
Human Orthologue:
NR6A1
Human Description:
nuclear receptor subfamily 6, group A, member 1 [Source:HGNC Symbol;Acc:7985]
Mouse Orthologue:
Nr6a1
Mouse Description:
nuclear receptor subfamily 6, group A, member 1 Gene [Source:MGI Symbol;Acc:MGI:1352459]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa29520 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa1764 | Nonsense | Available for shipment | Available now |
| sa13776 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa29520
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011096 | Essential Splice Site | 75 | 421 | 2 | 9 |
| ENSDART00000122773 | Essential Splice Site | 76 | 422 | 1 | 8 |
Genomic Location (Zv9):
Chromosome 21 (position 7739682)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 8147233 |
| GRCz11 | 21 | 8239772 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGTACTGTCGGCTGCAGAAGTGCCTACAGATGGGCATGAACCGCAAGG[G/A]TGAGACACACACACTTTGTATAGCTGTCTTTATGGGGACTTCCTATAGAG
Long Flanking Sequence:
CATTGTTTTCATAGAAAGCTGAAGAAGCTAATTTACTACACTCTTAAAATCCTGCATTGTTATAAGCCAACTTTGGATCAAATATGGACAAACCTAACATTAATAAAGTTTTTAATTGCTCTTATATGCCCAATGGTTGGTTTGGCTACATTTGACCCAATGTAGGGGTTACAACAACCCAGCATTTTTAGAGTGCATACTTCCCTTATAATCCCTAGTCCATGAAAATTGATAAATATACAGAGTCAGCAGGTGTGTGTGTTTCTCTATAGATGACGGTGGTGAGCGCTGGTGTCTGATCTGTGGGGATCGAGCGTCCGGCCTGCACTATGGTATTATTTCCTGCGAGGGCTGTAAAGGCTTCTTCAAGCGCAGTATCTGCAACAAACGCATCTATCGCTGCAACAGAGACAAGAACTGCCAGATGTCCCGCAAACAGCGCAACCGCTGCCAGTACTGTCGGCTGCAGAAGTGCCTACAGATGGGCATGAACCGCAAGG[G/A]TGAGACACACACACTTTGTATAGCTGTCTTTATGGGGACTTCCTATAGAGGTAATGCTATTTATATTGTACATACTGTATTTTCTCTCCTAAACCGACCCTCACAGAAAACAATCTGCATTTTTACATATTCAATATACTTCATTCGGTGTGATCTATGAGCATTTTCATCATGGTGGCCAAATAAATGTCCCCCAAAAGGTCAATGTTCTGGTGTTACTATACTTGTGGGGACACACATTGAAATGCACTGACAAATCAGTTTAAATCAAGGTTGCTTATGAGAATGAAACACAACATGAAAATTAATTGATGAATAAATTAGTATTTTATTGTTATAAGATGAATTGTTTTAAAATAATTACTAGTCTAATTTAATTACATTGTTATAAAAAGTCAAATAAATCATATTTAATACTTTATATTTAGTAAAGCAAATAAAAATTCCTGATTTAAATGGAAAGAAATTTATTTAAATATTGATTGAATTTTAATAATGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1764
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011096 | Nonsense | 365 | 421 | 8 | 9 |
| ENSDART00000122773 | Nonsense | 366 | 422 | 7 | 8 |
Genomic Location (Zv9):
Chromosome 21 (position 7755404)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 8162955 |
| GRCz11 | 21 | 8255494 |
KASP Assay ID:
554-1757.1 (used for ordering genotyping assays)
KASP Sequence:
AACGTTACTGGACGCTGTGTCGTGAGCTGACAGAACGACTTCATCCACAG[C/T]GACCCAAACGCTTYTCTGACATCATCACCTGCCTTACTGAGATACGCCAC
Long Flanking Sequence:
TTAACAAAAAAAACAATAATTAATAATAAAAAAACTTACAGTTTACATTTAGTTCATATAAGTAATTTATACTGTACTCGAAATTGGTCTGTTTTTACTTCATTCTGACCACTGGGAAATATGATCTGTCCAAAATGTTTTTTATTTTAACATCTGATATGCTATATAGAGTTATTAAATATGATATTTATACATGACTGCAGGTTTGGTGAGGATGCTATGGAGGTCATGGAAAGCTTAAATTTTCTCTTCCGTAAGTTTCATCAACTAAACATCAGCAATGAGGAGTACAGCTGCTTAAAGACCATCACGCTGCTTAATCAAGGTAATAACACACACACACACTAACCCTGATCCTTTTGTTTTTGACAACAGGTGTGTGTAATTTGAGTTTGTGTTTTGCAGAGACGACAGGTTTGTGCAACACGTCAATGCTGAAACAATTAAGTGAACGTTACTGGACGCTGTGTCGTGAGCTGACAGAACGACTTCATCCACAG[C/T]GACCCAAACGCTTCTCTGACATCATCACCTGCCTTACTGAGATACGCCACACGTCAGGTGTGTATCTGTGTGAGTTTGGACAGACATGTAAGTCAATGGGCTATATGCACAGCTAGTGTTTTTCAGCCAATGATGAACTTCAGGTAAAAGCTTAATGTGACTGTTTTCAATTTTAGAAGGTTTCTTTTACAGCACCGATGTTGTAATGTAATTACAACACATTCAGTTAAATAGACTTAAAAGCATTAATTTAGGTATTTTAGTGTAAAATGTGATGAAAGACACTGCTAGCGCAAAACGGGGTAAAAATAAACTCATATTTTAAAGACATTTTGGGGGAAATTTAATTTAATTTAATGCTTGTCCGGTCTGTGACTCACTTCATATTGTATATCTATCAGACAGAGAAGATCACTGATTTTTTTTTTTTTAAATCAGACCTTAAACGTGGCAATTTTATAATGGAAAAAAGTACATTGGAAGTGCGTGGGCTGACTGGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13776
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000011096 | Nonsense | 412 | 421 | 9 | 9 |
| ENSDART00000122773 | Nonsense | 413 | 422 | 8 | 8 |
Genomic Location (Zv9):
Chromosome 21 (position 7759475)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 8167026 |
| GRCz11 | 21 | 8259565 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACTGCWGTTTAAGGCAGTACTGTATTCCTGCACAACCAATCAAAACCCAT[G/A]GCTACCCAAAAGCTCCACCTCCAGGACATAAACCACACCTTTAAATCCTG
Long Flanking Sequence:
AGCAGCACAACTGTTTTTAACAATGCTAATGATAAGAAAAGTTTCTTAAGCCAAACATCATCATATTAAAATGATTTCTGAAGGATTATGTGACCCTGAACACAATTGCATCATAGGAATAAATTAAATCTTAAAATATTCTCAAATTGAAAACAGCTATTTGAAATCATATTACTACTTCACAATATTACCCTCTCATCAAATAACAAAGTCCAAACAATGCAAGCCTGTATGACACATAAATGATTGTTCATCCTGCTTATTTTCATGCAATTAAATTCAGTAAACTCCAGCTAAAATTGTATATATTCAAAGCAGCAAATACCTTGTTGTTCATGTATTTCACTATAACAGTCTGTAAGTTTAGTGAATGTGCTTTCTGACATTCATACTGTTTGTGTATTTATTGGTTGCAGGTAAAATGATGTCTATTCCCTTGGAGCAGCTCCCACTGCTGTTTAAGGCAGTACTGTATTCCTGCACAACCAATCAAAACCCAT[G/A]GCTACCCAAAAGCTCCACCTCCAGGACATAAACCACACCTTTAAATCCTGTTTTTATTACTTTTTCCTTCCCCAAGTGTATTTATTACATGACAAAGTTGAATGTAAAACTCTTTGACAGATTCGTGTGTGATTTCGAACTGTATCAAATGTAGCGACCGACCAAATTGGATACGAGAATTACCTCAGGAACACGACGGAAAAGTGGCCCTTGTGTTATGATCGCAACTGAAACGAATAACGCACTGCAATCCGTTGTTGAATTATGCAAGCCATGATATAAAATGTCCTTGTGTTACAGGATGTCACTGATAAAATATGCCTGTTGATGCTGAAATAATGAAGATGCCAGGGTGCTGAATTTCATTCAGATAACAATGTTTCTCATTCAGACGATAGCCAAGTTTTGAGCTTTCAGCTAAAATGATTGACATTTCAGCCATCCACAGTTCTGCTAAACACCAAAAATGAAGCGTGCTACAATATACACTCACTGGCCAC
Associated Phenotype:
Not determined