ZMP
shox
Ensembl ID:
ZFIN ID:
Description:
short stature homeobox protein isoform 1 [Source:RefSeq peptide;Acc:NP_001119883]
Human Orthologue:
SHOX
Human Description:
short stature homeobox [Source:HGNC Symbol;Acc:10853]
Alleles
There is 1 allele of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa1370 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa1370
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000029238 | Nonsense | 209 | 304 | 5 | 6 |
ENSDART00000100735 | Nonsense | 209 | 261 | 5 | 6 |
ENSDART00000133996 | Nonsense | 209 | 285 | 5 | 5 |
Genomic Location (Zv9):
Chromosome 9 (position 35618666)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 34838177 |
GRCz11 | 9 | 34647362 |
KASP Assay ID:
554-1282.1 (used for ordering genotyping assays)
KASP Sequence:
GACTAACTCGCTGTTTGTTTTTGCTCGCCCCGCAGGTYCARGCTCAGTTG[C/T]AGTTGGAGGGGGTCGGAACACACTCCCATCCTCACCTGCACCCACACCTC
Long Flanking Sequence:
GAATACTAAAAAAGAAAATAAAAAATAAGTCACTTTTTAAGCCAGGCGGATGTCTAATTTTCACCTCATCTTACTGAAATAATTGCTAAGAATCTGCAACCTGATATTTTATGCTGCCTGCTTACATCTTTTTTCCCTCTTTTCCCCCAGAGGAACTATGTGAATAAATATTTATATATGAGAATGAATATTTTGGGTGCGAAATTGTTTATTTATGCCATTGAATATATAATTAAGATTACATGATGTTGCAGCTTTTAAACACTGTATGGAGAGATTGGGTGTGGATCAAACTAATATGCTGAGATCTGCAACTGATGGAAGTTCTTTGACTATTAAGCTGTCTGAGCGCATTGCATAATTCAGCTAGAGATCAGATGGAAAGGAGTGACTGAAAAAAATGGGTGAAAGCAGATCCCCGCCGCTCCTTCAGCTGACCCAGCGGCCGCTGACTAACTCGCTGTTTGTTTTTGCTCGCCCCGCAGGTTCAGGCTCAGTTG[C/T]AGTTGGAGGGGGTCGGAACACACTCCCATCCTCACCTGCACCCACACCTCGCAGCCCACGCTCCATATCTGATGTTCCCTCCTCCGCCCTTTGGATTACCGATCGCGTCGCTGGCAGACTCGGCCTCTGCAGCGGCCGCCGTGGTTGCTGCTGCCAAGAGCAATAGCAAGAACTCCAGCATCGCTGACCTGCGACTCAAGGCAAGAAAACACGCCGAGGCGCTGGGACTCTGACCCCCATGGGCTTCTCTGCTGCTCTGAACTGATAATTGCTTCTAACACAAGACTAAGCCTGTGAAAAGGCCGTGACACTCACAGTTAAAACAAAACAAAATAAAAACAAAAAGGGGTGTAAGGGGAGAGAATGAGAGCGAGAAAAAAAAAGTCACAAAAAACCAGCTGCCAAAACAAACCACTTGTAGAGAAAGGTAATTAAATACCAATGAATCACCTTTTACTTTTCGCCCAACAGGCAGGACTTCTTGGAGGCCACTGGCTCAG
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |