ZMP
ptprna
Ensembl ID:
ZFIN ID:
Description:
protein tyrosine phosphatase, receptor type, Na [Source:RefSeq peptide;Acc:NP_001124060]
Human Orthologue:
PTPRN
Human Description:
protein tyrosine phosphatase, receptor type, N [Source:HGNC Symbol;Acc:9676]
Mouse Orthologue:
Ptprn
Mouse Description:
protein tyrosine phosphatase, receptor type, N Gene [Source:MGI Symbol;Acc:MGI:102765]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa34556 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa13683 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa34556
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081543 | Nonsense | 127 | 903 | 5 | 23 |
The following transcripts of ENSDARG00000058646 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 9 (position 7611181)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 7591274 |
GRCz11 | 9 | 7569665 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTAGGCCGCCGCCGCCTGCAGCTAAGAAAGTTTATTCCAGCCCAAACTCT[G/T]AACCTGGTCCAGCTCAGAGCTATGTGGATTACATGGTTTTAGACCCGCAC
Long Flanking Sequence:
AGTATAAACCTTTCACATTTTTTTGGTGAAATTGTGTGAGACCTTGTGAATTATTATTCATTCAAATGTGCTGGCAGTGGATTGATGAGTCAGGTTCAGGTTGACAGACTGATCAGATTATTCAGTATTTATTTGTGGAGGTTCTGAATAACAATATTAATCATTATTAGTAGAATATTTCATTCATTTATGACTTTTTTAGTTGTACATTAAAGTCAGAACTATTAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAACGAGAAGAAAAGAAAAGAAAGAAAGCCGTACAGCTCGGGAACAGCGTTGAGGATAAAAATGTGATTTTTTATTTTTCCGAGTGAGTGTTATTGCTTCTGGAAAACTTGATTTCAGGGTTCTGCTCAGACTTTAGATGTTTGATCTCCACTATTAGATTTAATGTAATTGACTGAATTTTTTAGGCCGCCGCCGCCTGCAGCTAAGAAAGTTTATTCCAGCCCAAACTCT[G/T]AACCTGGTCCAGCTCAGAGCTATGTGGATTACATGGTTTTAGACCCGCACCAGTCCTCCCCGCTCCGGATGCAAACCGTACCGGTGGACCCTTACTCATACCTACAAGTAAAACATGTATCTTATTTTATTATTTTATTTTATTCAGTTATTTTATTTAATTATTTTTTATGTAAAATGGATTTATGAAAAAATCACTATAGACTATTCCAAATATTTTATAATCAAATCATTTTGTTTTATAATTTTTTCTGGAAAGTTGCATGTAAAAAAGAAAATTATTATTATTTATTTATTTATTTATTCATTTATTTATTTATTATTATTATTACTTATTATTATTATTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTGTTGTTATTATTATTATTATTATGTTGGGGGATAGTATTTATTTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13683
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000081543 | Essential Splice Site | 816 | 903 | None | 23 |
The following transcripts of ENSDARG00000058646 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 9 (position 7649964)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 7630057 |
GRCz11 | 9 | 7608448 |
KASP Assay ID:
2260-1475.1 (used for ordering genotyping assays)
KASP Sequence:
CTGCAAACRGCATCCCATCGTCCACACGGCCCCTGCTGGACTTCCGCAGG[T/A]ACTGAAAACCACACGGCAGCTTATGCCATRCTGATCAGATGAGCTCCAAC
Long Flanking Sequence:
ATATTGGATTTAAGTTTGTAAATATTGTGACATTTAAATCTTTAAAACTGAATTTTAAAAAATATAATGATAGAAGGACTGTAATTAATATGCATGTCATATATTTAAGCTTGTGTTGGTTTATGTGTTAGATGGTATGGGAGAATGGCTGTACTGTGATAGTGATGATGACCGCTTTAGTGGAGGATGGAGAAAAGCAATGTGAACGTTACTGGCCTGATGAAGGATCATCGTTATATAACATCTATGAGGTGAGAAACATCAGTTTTACCTCTTTTTTCTGTCAGCTGTGCCTTTCAGTTTTTACAATATTTTCCCCCTGTATGTCTCAGGTGAATCTTGTGTCTGAACACATCTGGTGTAAAGACTTCTTGGTTCGTAGTTTTTACCTAAAGAACGTGCAGACTCAGGAGACCCGCACTCTGACTCAGTTTCACCTGCTGAGCTGGCCTGCAAACGGCATCCCATCGTCCACACGGCCCCTGCTGGACTTCCGCAGG[T/A]ACTGAAAACCACACGGCAGCTTATGCCATGCTGATCAGATGAGCTCCAACACATCACACACACAGTCTGCTGTAGATCCTCTCGAAATAGAGATTATAGCTGTGGCAAAAAATTCGAGAAATCAATTCGGCCCTGATTCTGAGTTTTTCAAAATGCAGAGCTGCATGCGTAATGAACAGCCGTACTCTGCTTGCACCCAATTCCTTACAAGTACCACTTGAACCTAAAATAATCAATAATAAAGTTAGGAAAACATTGAGCAAATTACAAGTGTGTTGGTAGTGAGCTGTGTTTACATTTATCTCATGACATAAAAATTGGCACATAACTCAACTGAACGCACAAGCACTCTTACTTTTTAAAACTTCTGCTGTTAACTAGCCTAGAGTGCTATCTGCTCTTAACAACTAGCTTAGAGCGTCATCTTCTGTTAAAAACTAGCCTAGAACGACATCTACTGTTAAAAACTATCCTAGAGCGACATCTACTGTTAAAAACTA
Associated Phenotype:
Not determined