Busch Lab

ZMP

pcdh2ab8

Ensembl ID:
ENSDARG00000089874
ZFIN ID:
ZDB-GENE-041118-7
Description:
protocadherin 2 alpha b 8 [Source:RefSeq peptide;Acc:NP_001009595]
Human Orthologues:
PCDHA1, PCDHA10, PCDHA11, PCDHA12, PCDHA13, PCDHA2, PCDHA3, PCDHA4, PCDHA5, PCDHA6, PCDHA7, PCDHA8, PCDHA9
Human Descriptions:
protocadherin alpha 1 [Source:HGNC Symbol;Acc:8663]
protocadherin alpha 10 [Source:HGNC Symbol;Acc:8664]
protocadherin alpha 11 [Source:HGNC Symbol;Acc:8665]
protocadherin alpha 12 [Source:HGNC Symbol;Acc:8666]
protocadherin alpha 13 [Source:HGNC Symbol;Acc:8667]
protocadherin alpha 2 [Source:HGNC Symbol;Acc:8668]
protocadherin alpha 3 [Source:HGNC Symbol;Acc:8669]
protocadherin alpha 4 [Source:HGNC Symbol;Acc:8670]
protocadherin alpha 5 [Source:HGNC Symbol;Acc:8671]
protocadherin alpha 6 [Source:HGNC Symbol;Acc:8672]
protocadherin alpha 7 [Source:HGNC Symbol;Acc:8673]
protocadherin alpha 8 [Source:HGNC Symbol;Acc:8674]
protocadherin alpha 9 [Source:HGNC Symbol;Acc:8675]
Mouse Orthologue:
AC020968.2
Mouse Description:
protocadherin alpha-3 [Source:RefSeq peptide;Acc:NP_619603]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa13592 Nonsense Available for shipment Available now
sa22409 Nonsense Available for shipment Available now
sa22410 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa13592
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124485 Nonsense 19 790 1 1
Genomic Location (Zv9):
Chromosome 14 (position 2517414)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 2281166
GRCz11 14 2199517
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAACAAGGATTTAAGTCGTGGATGTATTGTWTCGCAGCGCTYTCCCTTTG[G/A]AATATTACCGATGGGCAGATTGTGTACTCTATATCAGAGGAGGCTGAWCC
Long Flanking Sequence:
TTAAATCCAAATAAACTTGACTTTTCGTGTAGTTTTTATATTGTGCTGTGCAATAATACAACTCAAAGATATAAAAAATATATATATATTTCGGATTCAGTGAATTTTATTCACTGACTTTTATTATTTTTTTATAATATGGAAGCAAATATTAATTTATAAAAGCATATATGGCAGTTCTCAAGACACTAAGTCTATTTATATTCTGAATTGTCTACGATGCCTGGATTTTTCCGCGTGGTGTCGTTAGAGACTGGTATTTTCTTTTGCCTTGCCTATTTAAAGCTCCTCCTCAGTCAAGGGAGGGTTCAGTTTATCACGTGGGGCTTTTGTTCACGAGAGGCCACATTGCCGTCTGTATTTTTGCAGACGCTATGAGGAATTAGACGGTGTGTGCTTATACCACCGAATGGATGCGAAGGATTTATTTAAAGTGGTGTGAAAATGTCGAAACAAGGATTTAAGTCGTGGATGTATTGTATCGCAGCGCTTTCCCTTTG[G/A]AATATTACCGATGGGCAGATTGTGTACTCTATATCAGAGGAGGCTGATCCGGGAACAACAGTGGGACCTATAGCAAAGGATTTGAACCTAAATCTTCATGAATTGCAGCTTCGTGGGTTTCAGCTCGTTTCTGGTCCAAATAAGAGGTATTTCGACGTCAATTTAAAGAGTGGTGTTCTCCTCGTCAAAGAGAGAATAGACAGGGAACTGCTATGCGGAAGGAGCAGCAGATGCTCTCTGGAAATAGAAGCTATTGTTAACTCGCCTTTAAACATGTATCGATTGGAGGTGAATGTTTTAGATATCAATGATAACGGTCCTATTTTTAAATCATCAAAAACAGAACTAAATATTGTAGAATCTGCTTTCCCTGGTGAAAGGTTTACATTACCGGATGCGTTTGACGCGGATGTGGGCAGTAATTCGGTCAAGAGCTACAAGCTGAGTGCGAATGAGCACTTTACTCTGGATGTACAGAGCGGAGGAGAACAGAGTGTGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22409
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124485 Nonsense 74 790 1 1
Genomic Location (Zv9):
Chromosome 14 (position 2517578)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 2281002
GRCz11 14 2199353
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGGTTTCAGCTCGTTTCTGGTCCAAATAAGAGGTATTTCGACGTCAATT[T/A]AAAGAGTGGTGTTCTCCTCGTCAAAGAGAGAATAGACAGGGAACTGCTAT
Long Flanking Sequence:
GCATATATGGCAGTTCTCAAGACACTAAGTCTATTTATATTCTGAATTGTCTACGATGCCTGGATTTTTCCGCGTGGTGTCGTTAGAGACTGGTATTTTCTTTTGCCTTGCCTATTTAAAGCTCCTCCTCAGTCAAGGGAGGGTTCAGTTTATCACGTGGGGCTTTTGTTCACGAGAGGCCACATTGCCGTCTGTATTTTTGCAGACGCTATGAGGAATTAGACGGTGTGTGCTTATACCACCGAATGGATGCGAAGGATTTATTTAAAGTGGTGTGAAAATGTCGAAACAAGGATTTAAGTCGTGGATGTATTGTATCGCAGCGCTTTCCCTTTGGAATATTACCGATGGGCAGATTGTGTACTCTATATCAGAGGAGGCTGATCCGGGAACAACAGTGGGACCTATAGCAAAGGATTTGAACCTAAATCTTCATGAATTGCAGCTTCGTGGGTTTCAGCTCGTTTCTGGTCCAAATAAGAGGTATTTCGACGTCAATT[T/A]AAAGAGTGGTGTTCTCCTCGTCAAAGAGAGAATAGACAGGGAACTGCTATGCGGAAGGAGCAGCAGATGCTCTCTGGAAATAGAAGCTATTGTTAACTCGCCTTTAAACATGTATCGATTGGAGGTGAATGTTTTAGATATCAATGATAACGGTCCTATTTTTAAATCATCAAAAACAGAACTAAATATTGTAGAATCTGCTTTCCCTGGTGAAAGGTTTACATTACCGGATGCGTTTGACGCGGATGTGGGCAGTAATTCGGTCAAGAGCTACAAGCTGAGTGCGAATGAGCACTTTACTCTGGATGTACAGAGCGGAGGAGAACAGAGTGTGTCTGCTGAATTAGTGCTGCAGAAAGCTTTAGATCGAGAAAAACAGCCGGTGATCAAGCTTACGCTGACCGCAGTAGACGGAGGAAAACCTCAAAAATCAGGAACAACGCAAATTATCATCAATGTTGAAGATGTGAATGATAATATTCCTGTATTTAGTACATCTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa22410
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000124485 Nonsense 416 790 1 1
Genomic Location (Zv9):
Chromosome 14 (position 2518605)
Other Location(s):
Assembly Chromosome Position
GRCz10 14 2279975
GRCz11 14 2198326
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTATCTACTTGTAGATGGTCAGTTAGATCGAGAAACTGCGTCTGAGTA[T/A]AATGTGACAATCAGCGCTGCTGATGAAGGGTCTCCGCCTCTCTCTAGTAC
Long Flanking Sequence:
GCGGCCGTCGGTACGTCTGTTATCACGGTGCAAGCTAGCGACGCAGACGAGGGTTTGAATGGAGAAATAATTTATTCCTTTATAAGTCATGATGGAGATAATAGAGTGAACGCATTTACCATAGATTCTGTCAGTGGTGTAATCTCTGTTAAAGGGAACATTGATTACGAGACCAGCAATGCTGTGGAAATTCGAGTCCAAGCTAAAGATAAAGGGCAGAAACCAAGGGCTGCTCATTGTAAGGTTTTAATTGAAATCGTTGATGTTAATGATAATATACCTGAAATTTCCGTGACCTCTCTTGCTGAAACAGTGAGAGAGGATGCTGCTGCTGGAACAATGGTTGGACTGATTACCGTTAAAGATGGAGATGCGGGAAAAAACGGCGCAGTTGTTCTTAACATTCGCGGTTCTGCACCTTTTCGTATACAAAATACGTATAAGAATAAATATTATCTACTTGTAGATGGTCAGTTAGATCGAGAAACTGCGTCTGAGTA[T/A]AATGTGACAATCAGCGCTGCTGATGAAGGGTCTCCGCCTCTCTCTAGTACCAGTGTCATTGCTGTACACGTTTCTGATGTCAATGACAACGCGCCGCGCTTTCCAGAGCCCGTCATTAATGTGTATGTGAAAGAGAACAGTCAGATTGGAGCTGTTCTTCATACAGTATCTGCTGTTGATCCTGATGTAGGTGATAATGCCAGAATAACATATTCTTTACTAGAAAGCTCTAAAAGCGGCCCGGTAACATCCATGATCAACATCAACTCCGACACTGGAGATCTGCACAGTTTACAGTCGTTTAACTATGAGGAGATCAAAACATTTGAGTTTAAAGTTCAGGCCACAGACTCTGGTGTTCCTCCGCTCAGCAGTAACGTGACTGTAAATGTGTTTGTCCTGGATGAGAATGACAACAGTCCCGCGATTCTCGCGCCCTATTCCGAGCTCGGTTCCGTTAACACCGAGAACATTCCCTATTCTGCTGAGGCGGGCTACTT
Associated Phenotype:
Not determined