Busch Lab

ZMP

PTX4

Ensembl ID:
ENSDARG00000038072
Description:
pentraxin 4, long [Source:HGNC Symbol;Acc:14171]
Human Orthologue:
PTX4
Human Description:
pentraxin 4, long [Source:HGNC Symbol;Acc:14171]
Mouse Orthologue:
Ptx4
Mouse Description:
pentraxin 4 Gene [Source:MGI Symbol;Acc:MGI:1915759]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa33182 Nonsense Available for shipment Available now
sa13504 Nonsense Available for shipment Available now
sa17410 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa33182
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055500 Nonsense 200 476 5 6
Genomic Location (Zv9):
Chromosome 3 (position 27810442)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 27528481
GRCz11 3 27659323
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTAATTCTATTAGGAAGCAACATGGAGTGCTCATGAGGCATGTTCAGACT[C/T]AACCAAAGTCCAGAGAGCACAGAATAAGAGAGAGGTTGTTGTTGAGGTCA
Long Flanking Sequence:
AGAGAATTGGCAAAAACCACAACGTTACAAACAACGTAGATTTTAAATTTTTGAGTCAGCAGTTTGAGAGGATCTCCAGGGAGCTCCGTTCATTTAGAGAAATGACAGAACACAGTCTGAATTCCCTCAAATCTTGGACGAAGAGTCTACAGAAAAAGACCAACAGGCTTCACTCCAGTCTGTCCAACATGACGAGAGCACTGTGGCAGAACAACCATCACAACCTCAGAGAAATACACAAGCAGAGAGCAGCGTTGACTGATCTGTCCCATAAGATCCAGAAACAGCAAAGCCAAATCGACTCATTGGAGTCCTTAAAAGATCAGGTTCAGGATGGGATGCAGGATCTTCAGACGTCTCTCAAAAAACACCAGACACGGATAATGAAGTTGGAAAGTCAGATTCAAGAACTGTTAAAGATCATTTCAACTTCCAAGGCTGAAGATCCTTTTAATTCTATTAGGAAGCAACATGGAGTGCTCATGAGGCATGTTCAGACT[C/T]AACCAAAGTCCAGAGAGCACAGAATAAGAGAGAGGTTGTTGTTGAGGTCAACGAAACAACCACAGACCACAATAAGGGAAAGACAATGGCAGAGCACCACACAACCAACAGTTCAGGCTCACGAGGAACTTTTTCAACTTCCACTTCGACACAAAATCCCACATGTTCAAAGTCCAAAGGAAGAAGCCAAAAGTAAGTATTTATTAAACTCCAGTGGTTTTGTGCCTAAAAGTTAAATTGAAATGAAATTGTAAATTTATCCACATACAAAAGTATGTCAGTTTAAAAACTTAACAACAGTTTAACTGTCTACTATTTTAATACTAGAATCTTGCCATTTATACAACAATCATTTAAAAAAAGATTATATATTAAAATATGTCTAAACTAAACTATAACCTTTGAGAGGCACATCTTTTGAATGATTTTCTAACGGCCGCAAGGGTTTTGCACTCTGCTTATGCGCCCTGTGTGCCTTTCGTTTTAACCACCTGCTGCAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13504
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055500 Nonsense 249 476 5 6
Genomic Location (Zv9):
Chromosome 3 (position 27810589)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 27528628
GRCz11 3 27659470
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCACACAACCRAMAGTTCAGGCTCACGAGGAACTTTTTCAACTTCCACTT[C/T]GACACAAAATCCCACAYRTTCAAAGYCCAAAGGAAGAAGCCARAAGTAAG
Long Flanking Sequence:
TACAGAAAAAGACCAACAGGCTTCACTCCAGTCTGTCCAACATGACGAGAGCACTGTGGCAGAACAACCATCACAACCTCAGAGAAATACACAAGCAGAGAGCAGCGTTGACTGATCTGTCCCATAAGATCCAGAAACAGCAAAGCCAAATCGACTCATTGGAGTCCTTAAAAGATCAGGTTCAGGATGGGATGCAGGATCTTCAGACGTCTCTCAAAAAACACCAGACACGGATAATGAAGTTGGAAAGTCAGATTCAAGAACTGTTAAAGATCATTTCAACTTCCAAGGCTGAAGATCCTTTTAATTCTATTAGGAAGCAACATGGAGTGCTCATGAGGCATGTTCAGACTCAACCAAAGTCCAGAGAGCACAGAATAAGAGAGAGGTTGTTGTTGAGGTCAACGAAACAACCACAGACCACAATAAGGGAAAGACAATGGCAGAGCACCACACAACCAACAGTTCAGGCTCACGAGGAACTTTTTCAACTTCCACTT[C/T]GACACAAAATCCCACATGTTCAAAGTCCAAAGGAAGAAGCCAAAAGTAAGTATTTATTAAACTCCAGTGGTTTTGTGCCTAAAAGTTAAATTGAAATGAAATTGTAAATTTATCCACATACAAAAGTATGTCAGTTTAAAAACTTAACAACAGTTTAACTGTCTACTATTTTAATACTAGAATCTTGCCATTTATACAACAATCATTTAAAAAAAGATTATATATTAAAATATGTCTAAACTAAACTATAACCTTTGAGAGGCACATCTTTTGAATGATTTTCTAACGGCCGCAAGGGTTTTGCACTCTGCTTATGCGCCCTGTGTGCCTTTCGTTTTAACCACCTGCTGCACCTCGTGTTTTTGTCGTTGCGCTCTTTGCTCTTAGTTGAAAAAGTCAACTTTGATCGGAAAAAGCATGTCACCTCAGTTGCTTCTTTTTCATTGTCCAATCAAATGAAAAGCAAAGGCGGAGTTTTCATTGAGGCGACAGCAGTGTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17410
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000055500 Nonsense 306 476 6 6
Genomic Location (Zv9):
Chromosome 3 (position 27813561)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 27531600
GRCz11 3 27662442
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAACTGGAATACATGAGCTCTCTATTTGCACTTGGCTYAAAGTAGACGCC[A/T]ARTATGTTGGAACAATTTTTTCTTACGCCACGGAAAACAACGACAATATG
Long Flanking Sequence:
CAAACCGTTTAAGTTCAAAAACTAATCCTAATGAGTACTGTGAACTTAATTTATTTGTTTTGAAGTAATGAGTAAATCATTACCTTCAACACTGAGTTCAAAACTTTTTTTAAATAAGTAGAATTAACTTTCAGTACATTTTGAGTTAACTACACTCAATTCGTTTCATAAAGTCGACTGTTGGGTTTTACAGTGTATAAACGTAAAATTCAATTAATTAACTTTATTTAGAAAATTAATTAAAGTCTGAGAAAAAAACTATTTGACACTTTTAAAGACAAAGGTCAGATTGATTTATTTTTATTTTTGGCCAAATGTAAAATGTTGAATACGTTCTTATTTTTTTTCTCATTCTTTTTTTTTCTCATTTCAAAGTTTGCAATGTGGGTTCAATGCTTCTGTTTCCATCTACCTCCACTGAAAATTATGCCATCTTCCAGAAGACATTCCAAACTGGAATACATGAGCTCTCTATTTGCACTTGGCTCAAAGTAGACGCC[A/T]AGTATGTTGGAACAATTTTTTCTTACGCCACGGAAAACAACGACAATATGCTTGTTCTCTATGGTCATAATTCTGGAAAACTGGGCCTTATGGATTTTGTGATTGGAGATCCAACTTATCGTGAATTACCTTCACAAAATATCCTGGATGGCGAGTGGCACCATTTATGCATCATCTGGTCTTCTATCGAAGGCAGGTTTTGGTATTATTTGGACCGTCATCTTATATCTAATGGATCCAAGTTCCAAAAGGGCTATGAGATCCCTCCTGGAGGCTTTGTGGTTCTGGGGCAGGAGCAGGATTCACTTGGTGGGGATTTCGATGTAGCAGAAGCATTTGTGGGCAGATTGGCTGGTTTTGCATTGTGGACTAGGACTCTGAGCCCTGTTGAGGTGTCTGGACTGGCTGATGGAAAAGGAGTCCCACAAGGAGCAGTGCTCAGCCTGGATGATGTAGATCAGATGTCTGGTTCTGTTCAGCACATCACCTGTGAGTGTCTG
Associated Phenotype:
Not determined