ZMP
si:dkey-125i10.5
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate two pore segment channel 1 (TPCN1) [Source:UniProtKB/TrEMBL;Acc:
Human Orthologue:
TPCN1
Human Description:
two pore segment channel 1 [Source:HGNC Symbol;Acc:18182]
Mouse Orthologue:
Tpcn1
Mouse Description:
two pore channel 1 Gene [Source:MGI Symbol;Acc:MGI:2182472]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa135 | Nonsense | F2 line generated | Not yet available |
sa31430 | Nonsense | Available for shipment | Available now |
sa33584 | Nonsense | Available for shipment | Available now |
sa20394 | Nonsense | Available for shipment | Available now |
sa31431 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa135
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090102 | Nonsense | 75 | 644 | 2 | 21 |
ENSDART00000138123 | Nonsense | 100 | 805 | 3 | 26 |
Genomic Location (Zv9):
Chromosome 5 (position 24881251)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 22708516 |
GRCz11 | 5 | 23212316 |
KASP Assay ID:
554-1448.1 (used for ordering genotyping assays)
KASP Sequence:
AGTGCCCATGCGCTCAGTGCCTACCTGTTTGCTCACAGTCATCTGTTCTA[T/A]GTGGTGGAGCTTCTGACTGCGGTGTTACTCATGCTCCTGTCCCTCTCAGA
Long Flanking Sequence:
TAGTTTTAGAAATAAATCAGCTGATTTTTATTAGTTATTAATTTTAATGTGCTATTGAAATCATTAAATAATGTGGTAAATTGACTTTTGCCAACTATTTGAAGGCTTATGGTACAGTGTTGATGAAAAATCATCTAATATTTTTCTTCCTTCTCTACACAGATGGAGCAGGAAATCATGATGTTGTAAATAATGTCACCATCCCCGCCTCAGGAGCATCAGATCCTAGGGCCCAGAATTCTTTGCAGCAGAGCTGGGAAATGAACTTCCAAGAAGCAGCAATATACCTGCAGGTCATTATCTGATCCGCTACAATCTTAATGAAGCAACAAAATAGATTAACACCAACACACACTCAGTTCAGGGTTAATTAAAGTTTTGTCCTGCTCATTTGTTTTTGTTTGTCCTCAGGAGGGAGAGAATAACGACAAGTTTTTCACTCATCCTCGAAGTGCCCATGCGCTCAGTGCCTACCTGTTTGCTCACAGTCATCTGTTCTA[T/A]GTGGTGGAGCTTCTGACTGCGGTGTTACTCATGCTCCTGTCCCTCTCAGAGGCTCCTGCCGTCCCCTTCCTCCGCCTGGACGTCTATGTATGGGACTTCTACTTTACTATGTGTCTAGGGGCTTTGGTTTTGTAAAACTGTAACTACTTTTGAATGAAATTATTTATTTTGTTCATAAAAAAAAGTAACAATAAGGAATTTGCCAGTGTTACGCAAGATTTGTTTAAACTTTTTTTTCAGTAATCAATCTTAAATAAAGTTTATCTCGTAGATATGTTAAACACAGCTATTTTTAACATTGAAAATAATTTATTCTTGGTTAAAAATCCCACCTTCGAATCCAAAGCCACTAATAAAAGGCTATATTTTCAACAAATGGCAAACAGAATGGGATGAGGGCCCAGATTATAAACTTTTTGAAATTCAGCCAGAAATAGGAAGAAAATCGAATTTATTTTTTAAGTCACGACATGATGAGATTGTTTATACAAAATGCTGCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31430
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090102 | Nonsense | 336 | 644 | 9 | 21 |
ENSDART00000138123 | Nonsense | 361 | 805 | 10 | 26 |
Genomic Location (Zv9):
Chromosome 5 (position 24887660)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 22714925 |
GRCz11 | 5 | 23218725 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCCAGATGGCGTGTCTTTGAAACAGTTTGATGGACTGATGCGATTTTA[T/A]CATCCACGAATGACTCCACGTGATCGCTTTCTTACTTTTAAAGCCCTCAA
Long Flanking Sequence:
TAACTTAATTTGTAAACTAATTAGATTTGGATTTTTTTCATATATGAATTTCTTGGTTGATATCAACATCTGGTAGAAAGTTCAAGTCAACAGCACTTTTAGAAATATGTTTTCTGAGATAAATGGTGGCGTGTTGAATACTTAGTTCTCCCACTGTACATCGTCTTATTTTGCACAGCCCTACATTGTAAAGTTGATGTAAGCTTGCTTTGACTGTTTGCCTCATAGCTCCTAGCGGTGGTTTTTGACACGTTTAATGGAGTTGAGAAGATGAAGTTCAAATCTCTACTTCTACACAAGCGATCAGCCATCGAGCATGCCTTCCAGCTGTTGGTTAGTCGGCAGGTGCGATTTATACACTTCACAGTGTTCTTCATCTCCTCATTTACTGAAGCCTTGTGTGTTATGTCAGTGAATGTGTTCAATCTACCTCTGTTTTTTTTCATTTAGAGGCCAGATGGCGTGTCTTTGAAACAGTTTGATGGACTGATGCGATTTTA[T/A]CATCCACGAATGACTCCACGTGATCGCTTTCTTACTTTTAAAGCCCTCAACCATTCAGGTGCACCCATGCTGAGGTACAAACTCACATATGTTGTTATTGGTGGTTAATGAGAACTCTCCATTCTGTATGTGTGATATATTTTCAGGGTGTTCGCGGGGTCTTAAAAAGCCTTAAAATGTCCTAAATTTCAAAAACAAAATTTTAGGCCGTAAAAGGTCTTAAATTGATTGAAATGTTGTTTTGTAGGTCTTAAATCATTTTAAACGGATCTTAATTTTCCTTTGTTTATGTAAAGCTACCTAATCAATCCAACACACATCCAATCACCAACAAGTACATATGAATAAAATAAACTGAATAAACAGTCTGTTGAGCATACATTTAGTTTTTAATGAGTTTTTTTTAAATGTTGTTAATTATGTTTAATAGTTATATTGCAAAAGATATATGTATATAACTAGGGTATGCTTGCTTTGACACATTTTAAAAAGTGCCTAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33584
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090102 | Nonsense | 520 | 644 | 17 | 21 |
ENSDART00000138123 | Nonsense | 544 | 805 | 18 | 26 |
Genomic Location (Zv9):
Chromosome 5 (position 24892376)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 22719641 |
GRCz11 | 5 | 23223441 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CATAATTTTTTTCATTTCTTATTAAGGTTATTTAAAATTAAACAGCGCTA[T/A]CGGAATGTTCTGGACACAATGTTTGAACTGTTCCCGCGCATGGCCAGGTA
Long Flanking Sequence:
CCCATTTGTAAGTCGCTTTGCAGAGTTTGCTTGTTTTAACTCTAACCCTAACATTTTTCAAAATATGCGGCAAAGAAATAACTAATAAACTAATAATTTTTTTTTTTTGATGTGGCAAGTTAGAATATTTTTCCGCTGGACAAACTGGGCCATCAGAAAAAAAATCATTAGTTATTAGTCCTGCATAAATATGAAATTTCATTCATAATGGTCTGAAATTTTGTCCTAAATTGTAGGTAAATTGGACTTGGTTAACCCTTTAGAAACCATCTTTATGTAATAAACATTCAGCTTAGAAAAAATATCAGCTTGTTTTAAAGTTGTAGTAAATTTCTACATTTTTGCATGTCATTTGTACCTAATATTGACCCATATTTTGTGAACCATGAATTATCTTTATCATAATTTTTCTATTTTAGCTGTAGATATAAACATAAATTATCTGAAGTTCATAATTTTTTTCATTTCTTATTAAGGTTATTTAAAATTAAACAGCGCTA[T/A]CGGAATGTTCTGGACACAATGTTTGAACTGTTCCCGCGCATGGCCAGGTACAAAAATAATAATCAGTTTCAGCTCATTATTTACAGATGGAGGCCCTTGACTCAAAACACACTCTCTCTTTCTCTGTCTGTAGTCTAGGTCTGACTCTGATCATCTTCTATTACTCTTTTGCCATCGTCGGAATGGAGTTTTTTGCTGATGTTATTTATCCGAACTGCTGCGAGTAAGTTCATTTAACAACCATAATGGTTGAACTGACTGAAATGACTTTATACATTTTAGAAACTGAACATGGTTTACTCTGTTCACCCTGAAATGAAATCTTTCACACTCTAAATGATTTGTGTATGATGTCTTTTCAATAGCAATAGCACCGTCGCGGCCTCCTATCGGCAGATAAATGTCACCACTGGCAACCGGACCGAATTACAAGAGGGATATTACTATCTCAATAACTTCAATAACATCCTAAGCAGCTTTGGTATGTGCACACAGCCATA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20394
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090102 | Nonsense | 576 | 644 | 19 | 21 |
ENSDART00000138123 | Nonsense | 600 | 805 | 20 | 26 |
Genomic Location (Zv9):
Chromosome 5 (position 24892770)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 22720035 |
GRCz11 | 5 | 23223835 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGTATGATGTCTTTTCAATAGCAATAGCACCGTCGCGGCCTCCTATCGG[C/T]AGATAAATGTCACCACTGGCAACCGGACCGAATTACAAGAGGGATATTAC
Long Flanking Sequence:
CTTTATCATAATTTTTCTATTTTAGCTGTAGATATAAACATAAATTATCTGAAGTTCATAATTTTTTTCATTTCTTATTAAGGTTATTTAAAATTAAACAGCGCTATCGGAATGTTCTGGACACAATGTTTGAACTGTTCCCGCGCATGGCCAGGTACAAAAATAATAATCAGTTTCAGCTCATTATTTACAGATGGAGGCCCTTGACTCAAAACACACTCTCTCTTTCTCTGTCTGTAGTCTAGGTCTGACTCTGATCATCTTCTATTACTCTTTTGCCATCGTCGGAATGGAGTTTTTTGCTGATGTTATTTATCCGAACTGCTGCGAGTAAGTTCATTTAACAACCATAATGGTTGAACTGACTGAAATGACTTTATACATTTTAGAAACTGAACATGGTTTACTCTGTTCACCCTGAAATGAAATCTTTCACACTCTAAATGATTTGTGTATGATGTCTTTTCAATAGCAATAGCACCGTCGCGGCCTCCTATCGG[C/T]AGATAAATGTCACCACTGGCAACCGGACCGAATTACAAGAGGGATATTACTATCTCAATAACTTCAATAACATCCTAAGCAGCTTTGGTATGTGCACACAGCCATACATACCCAATCTTTTAACATCAGTATATACTGTAGTGTTTTATTTTATTTGTAAAAGTTTTTCACATTTTATAGAACATACTGTAGACATTTTGTAGATGTTTTTTTCCCTCTGTCATGTTTCAGTAACTCTTTTTGAGCTGACAGTGGTGAACAACTGGTACATCACAATGGTGAGTGTTAACACACTTGTACATCAGTTCTGTCATCATATCATATCAGATTTTCCTCAGAAAAGTGTGTTTTTGTTTGTTTGTTGTTTTGGTTGGTGTGTGTTTATGTGGTGCCCCCTGCTGTTTATGACAAGGCATTTTAACATTAATGTATAAATTGCACATCTATTTTCATATTAGTCTTTCTTTTTAGATACTAGTATATTTTTTTAGATTCAAGTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31431
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000090102 | Nonsense | 593 | 644 | 19 | 21 |
ENSDART00000138123 | Nonsense | 617 | 805 | 20 | 26 |
Genomic Location (Zv9):
Chromosome 5 (position 24892823)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 5 | 22720088 |
GRCz11 | 5 | 23223888 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAAATGTCACCACTGGCAACCGGACCGAATTACAAGAGGGATATTACTA[T/G]CTCAATAACTTCAATAACATCCTAAGCAGCTTTGGTATGTGCACACAGCC
Long Flanking Sequence:
GTTCATAATTTTTTTCATTTCTTATTAAGGTTATTTAAAATTAAACAGCGCTATCGGAATGTTCTGGACACAATGTTTGAACTGTTCCCGCGCATGGCCAGGTACAAAAATAATAATCAGTTTCAGCTCATTATTTACAGATGGAGGCCCTTGACTCAAAACACACTCTCTCTTTCTCTGTCTGTAGTCTAGGTCTGACTCTGATCATCTTCTATTACTCTTTTGCCATCGTCGGAATGGAGTTTTTTGCTGATGTTATTTATCCGAACTGCTGCGAGTAAGTTCATTTAACAACCATAATGGTTGAACTGACTGAAATGACTTTATACATTTTAGAAACTGAACATGGTTTACTCTGTTCACCCTGAAATGAAATCTTTCACACTCTAAATGATTTGTGTATGATGTCTTTTCAATAGCAATAGCACCGTCGCGGCCTCCTATCGGCAGATAAATGTCACCACTGGCAACCGGACCGAATTACAAGAGGGATATTACTA[T/G]CTCAATAACTTCAATAACATCCTAAGCAGCTTTGGTATGTGCACACAGCCATACATACCCAATCTTTTAACATCAGTATATACTGTAGTGTTTTATTTTATTTGTAAAAGTTTTTCACATTTTATAGAACATACTGTAGACATTTTGTAGATGTTTTTTTCCCTCTGTCATGTTTCAGTAACTCTTTTTGAGCTGACAGTGGTGAACAACTGGTACATCACAATGGTGAGTGTTAACACACTTGTACATCAGTTCTGTCATCATATCATATCAGATTTTCCTCAGAAAAGTGTGTTTTTGTTTGTTTGTTGTTTTGGTTGGTGTGTGTTTATGTGGTGCCCCCTGCTGTTTATGACAAGGCATTTTAACATTAATGTATAAATTGCACATCTATTTTCATATTAGTCTTTCTTTTTAGATACTAGTATATTTTTTTAGATTCAAGTATCTATTCAAAACTTGTTGTGAGTAGTTAGATAAGAATTGTTGCTAGTAGTAAT
Associated Phenotype:
Not determined