Busch Lab

ZMP

cdh10

Ensembl ID:
ENSDARG00000055843
ZFIN ID:
ZDB-GENE-060614-1
Description:
cadherin-10 [Source:RefSeq peptide;Acc:NP_001034722]
Human Orthologues:
CDH10, CDH6, CDH9
Human Descriptions:
cadherin 10, type 2 (T2-cadherin) [Source:HGNC Symbol;Acc:1749]
cadherin 6, type 2, K-cadherin (fetal kidney) [Source:HGNC Symbol;Acc:1765]
cadherin 9, type 2 (T1-cadherin) [Source:HGNC Symbol;Acc:1768]
Mouse Orthologues:
Cdh10, Cdh6, Cdh9
Mouse Descriptions:
cadherin 10 Gene [Source:MGI Symbol;Acc:MGI:107436]
cadherin 6 Gene [Source:MGI Symbol;Acc:MGI:107435]
cadherin 9 Gene [Source:MGI Symbol;Acc:MGI:107433]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa15260 Nonsense Available for shipment Available now
sa1332 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa15260
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078232 Nonsense 8 785 2 12
Genomic Location (Zv9):
Chromosome 2 (position 28617713)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 28919348
GRCz11 2 28902881
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTCATCGTGACRATCRWTTGGCTGCARTGATAATGAATCACTTCCTCTG[G/A]CTGCTTCCACTGGTCTTTCCGCACCTGAGCTCCCCAGTCATACTGCTAGA
Long Flanking Sequence:
TAATGCAGTAATTACTGAAAATCCACGGGTAAAACTCCAGCAATCCATAACAACAATCTGCCCTGATCATAACACAGACCTGCCTCAGTATTCCACCTTAACTGTGTTTACCGATGCAGGCGCTTCTGTTAATTGTAAGGGCATGTTATATGCAAGGTTTTGTGTGAGGCTACATGTTTGATCTTCTGTGAACAGAATAGTGCACGAAGGCCCAGTGGGATATATTCCACAAACAACAAAGAGATTACACTGTAAGAAACGAGTGTTGCATCTTGACAAGGGCTGCAGTGACCTCCAACACACTGTAACTTTTTCCCTTTGATTAATTTTTACAGGGAATCAAAGGAGGATCAAAGGCGATTCTACAATGTCAGGGTTGCTGATGTTGCCATCTACATCGCTTTCAATTCAGCGCTGCCTCGCCTTCTTAGCTTATTCATAAGGAGTCGCTGTCATCGTGACGATCGATTGGCTGCAATGATAATGAATCACTTCCTCTG[G/A]CTGCTTCCACTGGTCTTTCCGCACCTGAGCTCCCCAGTCATACTGCTAGAGAGGAATGATGGGAATCTCTTTCACAACTGGAGCTATCAGATGAAAGGAGATAAAATGGTGCTGCACAGATCCAAAAGGGACTGGATGTGGAGGCAGTTCTTCCTGTCGGAGGAATACATGGGAAATAACAATCAGTATGTCGGCAAGGTGAGCGTCCAAGATAACGCAGGCCCACAAGCCCCTATGTCAAGCAAAATAGTGTTTGGAGGAGATGCAAATGCCTGATTTTATTTATTTATTCATTTATGAATGGAGCAAGTAGCAATCCACACTCATACAGACTGGTTTTGCTGTTTTCATTTACATTTGTCAGGAAACAGACAGGTTTCAACACAAAGCCTTTCACTGTGTGTAGAGTAATTCAATCCTCTTTTTAAATCACCACTTATGTTGACGTCATCTTTACTTAGCGGATGTTCGATTATTACAAATATAGTAACAGTTTATAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1332
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078232 Nonsense 633 785 12 12
Genomic Location (Zv9):
Chromosome 2 (position 28648655)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 28950290
GRCz11 2 28933823
KASP Assay ID:
554-1246.1 (used for ordering genotyping assays)
KASP Sequence:
CATATCTTCACTTTCCTCCAGTGATTGTGGTGCTGTTCTCGGCTCTGAAG[A/T]AACAGAGGAGAAAGGARCCCCTKATCATCTCGAAGGAGGACGTCCGGGAC
Long Flanking Sequence:
GATTACAATGGCTAACTTGATGCCAAACGTTGTTGCTATAAGTTTAATCTTACTAATATTTATAGCTATAATCTCACTGGGGCAGATGGTGGCCTCGTAGCAAGAAAGTTGCTTGTTTGAGTCCGGGCTAGGTGAGTTGGCATTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTCGTGTGGGTTTCCTCTGGTTGCCCTGGTTTACCCCACTGTCCAAAGACTTGCAGTCCAGGTGAATTGAATAAACTAAATTGGCCGTAGTGTATGAGTTCATGTGTTAATGTGAGAGTGTATGGGTGTTTCCCAGTACTGGGTTGTGGCTGCAAGGGCTGGAAGAAACATATACTGGAATTGTTGGCACTTCATTCCACTGTTGTGACCCCCAATAAACAAGGGACTAAGCCAAAAGAAAAATTAATGAATGAATAAATCTCACTGACCAAAACCCATATCTTCACTTTCCTCCAGTGATTGTGGTGCTGTTCTCGGCTCTGAAG[A/T]AACAGAGGAGAAAGGAACCCCTTATCATCTCGAAGGAGGACGTCCGGGACAATGTGGTCAGCTACAACGATGAGGGCGGTGGCGAGGAAGACACGCAGGCCTTCGACATCGGCACACTGCGCCACCCGGAGGTCATCGAAAGCAACAAACTGCGGCGCGACATCATTCCAGAGATGCTGTTTCCCTACCATAGACCTTCACCCATGAAGGAGTGCGCAGACGTCAGGGACTTCATTATCAGCAGACTGCAAGAAAACGACACAGACCCTTTCGCCCCGCCTTATGATTCGCTCGCAACTTACGCTTATGAGGGAAACGGATCAATCGCTGAGTCACTGAGCTCTCTGGAGTCATCTCTCACTGAGGGAGACCATGAATATGATTACCTTTCTAACTGGGGCCCGCAGTTTAAGAAGCTCGCCGACATGTACATTGGAAAGGATACAGGAATCGCCAACTAGACTGACGGGTTGGTGACATTCGTATTCTCTGTAAGTACG
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461