ZMP
pou5f1
Ensembl ID:
ZFIN ID:
Description:
POU domain, class 5, transcription factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q90270]
Human Orthologues:
POU5F1, POU5F1B
Human Descriptions:
POU class 5 homeobox 1 [Source:HGNC Symbol;Acc:9221]
POU class 5 homeobox 1B [Source:HGNC Symbol;Acc:9223]
POU class 5 homeobox 1B [Source:HGNC Symbol;Acc:9223]
Mouse Orthologue:
Pou5f1
Mouse Description:
POU domain, class 5, transcription factor 1 Gene [Source:MGI Symbol;Acc:MGI:101893]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1329 | Nonsense | Available for shipment | Available now |
| sa1294 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa1329
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000065817 | Nonsense | 16 | 472 | 1 | 5 |
Genomic Location (Zv9):
Chromosome 21 (position 11892529)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 13593703 |
| GRCz11 | 21 | 13690432 |
KASP Assay ID:
554-1243.1 (used for ordering genotyping assays)
KASP Sequence:
AAGATGACGGAGAGAGCGCAGAGCCCAACAGCAGCAGACTGCAGACCCTA[T/A]GAGGTCAACAGGGCCATGTATCCTCAAGCCGCGGGCCTGGATGGACTTGG
Long Flanking Sequence:
TGAGGTTAATCTATTTTTATTTGGACTTTTATAAGATGCAAATCTATACAGATACACCTCGCGTTCCCAAACATGTCCTCGCCCAATGAGAAAACCAAGTTCATTCACAAATTCACAGTCAGCTGTAGCTTATTGTCTCGGGTGGCCAATGGGAGAGAAGTTGGTTCAGACCCCTGCCTCCAACTCCGATTGATTAGCAAAACCTGTGTGGGCCAGGATCAGAGCTGAGATTGGGAAGAGTTGGAGGTGGTGAATTATTGGCCCATTCTGATTGATGGCCGCCACACAAGGACTGCGCACATTTCCACACAGGCTGATACTGAGACGCGCAATCTGAGTTTAGTCTGTTTGGATCATCCTGGGATGGAGCAACTGATCGACGTTTATTGATTATCAAACCAGCAGTCTTTACGCTTTCTTGTTTGAAATCTCAACAACCTTTTTAGCGGAAAGATGACGGAGAGAGCGCAGAGCCCAACAGCAGCAGACTGCAGACCCTA[T/A]GAGGTCAACAGGGCCATGTATCCTCAAGCCGCGGGCCTGGATGGACTTGGCGGAGCGTCCTTGCAGTTTGCGCACGGTATGCTTCAGGATCCAAGTCTGATTTTTAACAAGGCCCATTTCAACGGAATCACCCCCGCGACAGCCCAGACCTTCTTTCCATTTTCAGGCGATTTTAAAACGAACGATTTGCAAGGTGGCGACTTTACGCAGCCCAAACACTGGTACCCGTTTGCGGCCCCCGAGTTCACTGGGCAGGTTGCAGGAGCGACGGCCGCCACTCAGCCGGCGAACATCAGCCCTCCTATCGGCGAGACTAGAGAGCAAATTAAGATGCCATCTGAGGTCAAAACCGAGAAAGATGTTGAAGAATACGGGAATGAAGAAAACAAGCCGCCGTCACAATATCACCTCACCGCTGGAACATCTTCCGTCCCCACCGGGGTGAACTACTACACGCCATGGAACCCTAATTTCTGGCCTGGACTGTCCCAAATTACGGC
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa1294
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000065817 | Nonsense | 367 | 472 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 21 (position 11889172)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 13590346 |
| GRCz11 | 21 | 13687075 |
KASP Assay ID:
554-1209.1 (used for ordering genotyping assays)
KASP Sequence:
TGGAAGGCACAGTSCGTTCTGCTCTAGAGTCGTACTTCGTGAAGTGCCCC[A/T]AACCCAACACTCTGGAGATAACGCACATATCCGATGATCTAGGCCTGGAG
Long Flanking Sequence:
CTTGACATTTAGCAGTTGTAAAATACATTTAAAGTCACCATTCAATTTTTAGTGTGGAGGTTGAATGTCTCATAATGAAACCCTTATGCACATCAAACACAAACTGTGAAAAAATGTTTTGGTATAATACTCTTAAGTGTATGACAATGTTGAGTGGTCTACATTTTCTCACACGAGAAAACAAATCTTCACACTAGCATATCAAGTATATTTGTTGTACAGGCTATAATCTAAAACAAATGACCACTTATTGCATTGATTGGCCAACAACATAAATGATTCCATGTACTTGCAAAAAATTTATTTGTTACTCTTAACCTTTGGTTTTATCAAAAGATTTATGTCAAACAAGCTTAATTTTGAGCTTAATGTTATTTCAATTTATCTTTCAGATGTACAAAATTGAACGGGTGTTTGTCGACACGCGAAAAAGAAAACGAAGGACCAGCTTGGAAGGCACAGTCCGTTCTGCTCTAGAGTCGTACTTCGTGAAGTGCCCC[A/T]AACCCAACACTCTGGAGATAACGCACATATCCGATGATCTAGGCCTGGAGAGAGATGTAAGCACGCCTCAAAGTCTGTGAAGCATTTTTCACCTTCTAGAAGCTGTTTGACTTTAACAATGTGCTTTTCTCTAGGTAGTGCGTGTATGGTTCTGCAACCGTAGACAGAAGGGAAAGCGTCTAGCTTTGCCCTTTGATGACGAGTGTGTTGAAGCACAGTATTACGAGCAGAGTCCACCACCTCCACCCCACATGGGTGGCACTGTGCTCCCAGGTCAAGGCTATCCTGGACCAGCCCATCCTGGAGGAGCCCCTGCCTTATACATGCCATCCCTCCACCGACCAGATGTCTTCAAAAACGGCTTGCACCCTGGTTTGGTGGGTCATCTCACCAGCTAACTTGCTCCAGGTGCTCACTAAAGTTTATAGAAAAGCTCCAAGCCAAGCTATGGATCAAATCAGCCATGCTTATTATTCTTTTTTTTTTTTTTTGTAACACTG
Associated Phenotype:
Not determined