ZMP

stx5al

Ensembl ID:

ENSDARG00000003175

ZFIN ID:

ZDB-GENE-030131-1825

Description:

syntaxin 5A, like [Source:RefSeq peptide;Acc:NP_955924]

Human Orthologue:

STX5

Human Description:

syntaxin 5 [Source:HGNC Symbol;Acc:11440]

Mouse Orthologue:

Stx5a

Mouse Description:

syntaxin 5A Gene [Source:MGI Symbol;Acc:MGI:1928483]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa13268	Essential Splice Site	Available for shipment	Available now
sa23950	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa13268

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

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Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000021121	Essential Splice Site	126	298	6	11
ENSDART00000146315	Essential Splice Site	175	347	7	12

Genomic Location (Zv9):

Chromosome 21 (position 25939211)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	21	26509029
GRCz11	21	26545724

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CGGCAGACATCTTCAGACACATTCCAACACCATCGTGGTCTCATTACAGG[T/C]ATTAACCTCTGGCTTTAGTATTCATTTAMAAAAYAGTGAWGTCTAGTGGA

Long Flanking Sequence:

TTTGACCTATAATTTATTCAGACCTACTTAAGCTTTAATGGTCTGTGTTATTTCATCGACTTGGCTTTATGACAGATATTGACCCGCATCTTATTAACAGGCGAATTGGAAGAGACCTCAGCAACACTTTTGCCAAGCTGGAGAAGCTCACAATTCGTAAGTATCTTGTCTCTCCTGTCATCGTTGCACATGTTTTTAGCATATAACTCAAACGGTTTACGTCTACAGTTGCCAAAAGAAAGTCCCTGTTCGATGACAAAGCCACTGAGATTGATGAACTCACTTATATCGTGAAACAGGTGAGGGTTTATTATTACCTGCCATTCAAAAAGGACACATTATTCTTTCTGTGCATTTCATACTCTTAACCATCCCTGTTCAGGACATCAACAGTCTGATTAAGCAGATTGCTGGCCTGCAGGAGCTGGTTCGGTCTCGAAGTGCACAGAACGGCAGACATCTTCAGACACATTCCAACACCATCGTGGTCTCATTACAGG[T/C]ATTAACCTCTGGCTTTAGTATTCATTTACAAAACAGTGATGTCTAGTGGATGTTCTCTTGAAATATAATATGTTTTCTGTTTGTAGTCCAAACTGGCATCGATGTCCAGTGACTTCAAGTCTGTCCTGGAAGTCAGAACAGAGGTAATTGATTTCCTTTTTTGCCTTAAATGCAGTATTTGGTAGGAGTGCTAACTTTGACCAAATATAGAGTTTGCAATCGGCTAATAATCACTTATTAGTTCTCAAGTTATTGATCTCATTAAATTGATCTGATCTGATATGCTTACAGCGGTGAGGTGAAAGTCATACATCTTGATCTATATTAACTAAATATACCTCAATGGCAGTTAGTCTTCAGCCTGCAAAAACACACAAAGATCTTCTTGATGTCTTCTGTGAATTTTTCATTCTCCATTATATTGGTTGGTGTTGCCAGATTTCACTAGAAAATCACACCAGCTGTTTTTATGCCTTAAGACAGAGGTGTCCAAAGTCGGA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa23950

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000021121	Nonsense	198	298	9	11
ENSDART00000146315	Nonsense	247	347	10	12

Genomic Location (Zv9):

Chromosome 21 (position 25943231)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	21	26513049
GRCz11	21	26549744

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACTCCAAGAAGACGGATATATCTATAGATATGGACCTGAATTCCAGTCAG[C/T]AGATGCAATTAGTCAATGAACGGGTATTGTTTGTTTATTGGTTGTTTTGT

Long Flanking Sequence:

AAAATAGGAGTTTGGTCACCTAACATCTATAGAAATAGGAAGATAATACATTTAAAAAATGTACAAACTATATTTGACATGTTTTGTGTTACTCTTAATTTTTCCTGTTTATTAAATTTTATTTCCTATTATTACCCCAACATAATAACTTGAGTATATTAATGTTTGAACGGATTCGCTTCTGTTTTGTCCTTGGTGCTGTCTAATCTACTGATAAGCATAAATATAGTATTTTTTTATTTCCTATAGAAAATATAATTTTAAAAGAGAGACTTGTGAGGTCCTAATGACTGTAATAAAGGTCAAATCTGAGACAAACAATTGACAAGACAGTGTATATTTTACATTTACTGTGTTTGTTTTATTATATAAAATTCTGGTAACAAACCCGGCACTCTTTTTCATCTTTTTCATGTTTATTCCCAGATAATTCAGTGCTTATGCAGGACGACTCCAAGAAGACGGATATATCTATAGATATGGACCTGAATTCCAGTCAG[C/T]AGATGCAATTAGTCAATGAACGGGTATTGTTTGTTTATTGGTTGTTTTGTAACAAAAGCTGCTTGTAAACTGGTTTAAATGTGTTTAAATCACTGCTGCCTTGTTTGTGTTTAGGATTCGTACATTCAGAACCGTGCAGACACTATGCAGAATATAGAGTCCACCATTGTTGAGCTCGGATCCATATTTCAGCAGCTGGCTCATATGGTGAAAGAACAGGAAGAGACTGTACACAGGTGAGGAAAGAAATGTTTGTGCTTTTCAATACATGTGGATTTGGTTATTGACCATTAGACACAATCCAGGATAGTTTGGTTCTTCAAAACTCATCCAAGTGTTTTTGTCATAGCAGCATGTCTGCAGCATGTGAGTTCAAACCTGCCCAGAAGCAGATTTTTTTATATAAAAAGTATTCAGTTGAGCTGTTTCAAGTAAAGGTGATTCTGAAAGCATGTACCGATAAATGATATTTCCTTACAAGTGTGTTTTGATTTCATTTC

Associated Phenotype:

Not determined