Busch Lab

ZMP

ppargc1al

Ensembl ID:
ENSDARG00000067829
ZFIN ID:
ZDB-GENE-080505-1
Description:
Proliferator-activated receptor gamma coactivator 1 alpha [Source:UniProtKB/TrEMBL;Acc:D7F2U9]
Human Orthologue:
PPARGC1A
Human Description:
peroxisome proliferator-activated receptor gamma, coactivator 1 alpha [Source:HGNC Symbol;Acc:9237]
Mouse Orthologue:
Ppargc1a
Mouse Description:
peroxisome proliferative activated receptor, gamma, coactivator 1 alpha Gene [Source:MGI Symbol;Acc:

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa34243 Nonsense Mutation detected in F1 DNA Not yet available
sa31621 Nonsense Available for shipment Available now
sa13186 Nonsense Available for shipment Available now
sa34242 Nonsense Mutation detected in F1 DNA Not yet available
sa7107 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa34243
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097710 Nonsense 364 873 8 13
Genomic Location (Zv9):
Chromosome 7 (position 73167826)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 70161594
GRCz11 7 70611859
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAACCCTTTCAAAGTATCACTCAAAAACAAGCTGTCTTCATGCTCTCCCT[C/A]GGCCCTGACAAGCAAAAGGCCCAGGCTGAGTAATGGGGGCTCTTGCCCTC
Long Flanking Sequence:
AAGATGGTTGGGGTTCATGAGGAGAAAAGGTGGCAAAGATGAAGAGAATGATAACAGCTCCCGCATCACCGTGCTTTCATCGGAGTCCCATGAGGATAGCATTCGCGCATCTGTTGAAACCACCAGTCTTATCATTATAAGATCTGACTGTTTACTTTCTGATGAATTAGGATTGTTTACGGTCTGGAGGAAGTTTAATTGAGTAACTCTGTGTCTGTATCGCAGTGCAATCTGAGGTCACATTGATCTGTCAGGGTCGCAATAAAATGCGGATAAGGATTAGCCCTAAATGAAAGGGAATATTTTAATCAGGCTCGAGTGTTCAATCACTTAGAGACACTCTTGAGCACTGTTGAGGAATGAGAGTGATCCCGTTTGGTAAATCTTTTGTCTCTTCTTCCCTCCAGGTCTGACACCACCTACCACGCCTCCTCACAAAGCCAGTCAAGAGAACCCTTTCAAAGTATCACTCAAAAACAAGCTGTCTTCATGCTCTCCCT[C/A]GGCCCTGACAAGCAAAAGGCCCAGGCTGAGTAATGGGGGCTCTTGCCCTCAGCCAACCAGCGGCTCTATTCGGAAGGGCCCAGAGCAGACTGAGCTCTATGCCCAGCTGAGCAAGGCGTCCTCCACTATGCCCCAAGGGGGCTTGGAGGATCGTCGGGGCAAGCGGCCCATGCCCCGTGTCTTTGGCGATCATGACTATTGCCAATCTACAAGCACAAAACGAGACAGCACCACCCCAGCTGCAGTGGTACCCGGGCCAACAGAGGGCCGGCATGTGGAATGTAAAGACTTAAACATGCCAACCTCCACTACTACGACATCATCGTTGTCTTCCACCCCCCCTTCGTCTTCCTCACTGGCCAGGCAGCTTCAAGGCCTTTCCCCAACACCTCAGGAGGCTTGTCCGGACACATATGCTCACGTGCAGCACCACGACTCAAGCTCCAAAATGACAATGGACTGCAGTTCTGGTGGCAGGAAACTTCTTAGGGACCAGGAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31621
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097710 Nonsense 412 873 8 13
Genomic Location (Zv9):
Chromosome 7 (position 73167682)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 70161450
GRCz11 7 70611715
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTCTATGCCCAGCTGAGCAAGGCGTCCTCCACTATGCCCCAAGGGGGCT[T/A]GGAGGATCGTCGGGGCAAGCGGCCCATGCCCCGTGTCTTTGGCGATCATG
Long Flanking Sequence:
TGACTGTTTACTTTCTGATGAATTAGGATTGTTTACGGTCTGGAGGAAGTTTAATTGAGTAACTCTGTGTCTGTATCGCAGTGCAATCTGAGGTCACATTGATCTGTCAGGGTCGCAATAAAATGCGGATAAGGATTAGCCCTAAATGAAAGGGAATATTTTAATCAGGCTCGAGTGTTCAATCACTTAGAGACACTCTTGAGCACTGTTGAGGAATGAGAGTGATCCCGTTTGGTAAATCTTTTGTCTCTTCTTCCCTCCAGGTCTGACACCACCTACCACGCCTCCTCACAAAGCCAGTCAAGAGAACCCTTTCAAAGTATCACTCAAAAACAAGCTGTCTTCATGCTCTCCCTCGGCCCTGACAAGCAAAAGGCCCAGGCTGAGTAATGGGGGCTCTTGCCCTCAGCCAACCAGCGGCTCTATTCGGAAGGGCCCAGAGCAGACTGAGCTCTATGCCCAGCTGAGCAAGGCGTCCTCCACTATGCCCCAAGGGGGCT[T/A]GGAGGATCGTCGGGGCAAGCGGCCCATGCCCCGTGTCTTTGGCGATCATGACTATTGCCAATCTACAAGCACAAAACGAGACAGCACCACCCCAGCTGCAGTGGTACCCGGGCCAACAGAGGGCCGGCATGTGGAATGTAAAGACTTAAACATGCCAACCTCCACTACTACGACATCATCGTTGTCTTCCACCCCCCCTTCGTCTTCCTCACTGGCCAGGCAGCTTCAAGGCCTTTCCCCAACACCTCAGGAGGCTTGTCCGGACACATATGCTCACGTGCAGCACCACGACTCAAGCTCCAAAATGACAATGGACTGCAGTTCTGGTGGCAGGAAACTTCTTAGGGACCAGGAGATCCGGGACGAGCTCAACAAGCACTTTGGAAAGCCTCAGCAAGCCTTCTATAGCGGGGTAGTGGGAGAGCCGAGGGGCAAACAGCCAATTGAGGACAGTGACTCTGGGGATGAGTACCCGGGTCTACTCGGCGACTACATCCACC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa13186
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097710 Nonsense 502 873 8 13
Genomic Location (Zv9):
Chromosome 7 (position 73167411)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 70161179
GRCz11 7 70611444
KASP Assay ID:
2259-9833.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCTTCAAGGCCTTTCCCCAACACCTCAGGAGGCTTGTCCGGACACAWA[T/A]GCTCACGTGCAGCACCACGACTCAAGCTCCAAAATGACAATGGACTGCAG
Long Flanking Sequence:
CCACCTACCACGCCTCCTCACAAAGCCAGTCAAGAGAACCCTTTCAAAGTATCACTCAAAAACAAGCTGTCTTCATGCTCTCCCTCGGCCCTGACAAGCAAAAGGCCCAGGCTGAGTAATGGGGGCTCTTGCCCTCAGCCAACCAGCGGCTCTATTCGGAAGGGCCCAGAGCAGACTGAGCTCTATGCCCAGCTGAGCAAGGCGTCCTCCACTATGCCCCAAGGGGGCTTGGAGGATCGTCGGGGCAAGCGGCCCATGCCCCGTGTCTTTGGCGATCATGACTATTGCCAATCTACAAGCACAAAACGAGACAGCACCACCCCAGCTGCAGTGGTACCCGGGCCAACAGAGGGCCGGCATGTGGAATGTAAAGACTTAAACATGCCAACCTCCACTACTACGACATCATCGTTGTCTTCCACCCCCCCTTCGTCTTCCTCACTGGCCAGGCAGCTTCAAGGCCTTTCCCCAACACCTCAGGAGGCTTGTCCGGACACATA[T/A]GCTCACGTGCAGCACCACGACTCAAGCTCCAAAATGACAATGGACTGCAGTTCTGGTGGCAGGAAACTTCTTAGGGACCAGGAGATCCGGGACGAGCTCAACAAGCACTTTGGAAAGCCTCAGCAAGCCTTCTATAGCGGGGTAGTGGGAGAGCCGAGGGGCAAACAGCCAATTGAGGACAGTGACTCTGGGGATGAGTACCCGGGTCTACTCGGCGACTACATCCACCCAGGTCTGCCTGATTTCGAGGACCTGGAGGTAGGCCGGGAGCGCCTGTTCTACTTGGGGGAAGGTTCTCCACTCGAGCTGCTCCTCGAAGGGTCACCCTCCAGCTCCCCTTCCAGCAGTTCCTTTTCATGGTGCTCTGTCTCGCCTCCTTCCTCTCAGCTCTCCCCACAGCACCTCCGCTGGCCACGCTCCATCTCCCGCTCCCGTTCTCGTTCTTCATCTCACCACAGGCGCAGATCCCTCTCCAGGTCTCCCTACTCCCGCTCCGGGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34242
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097710 Nonsense 726 873 10 13
Genomic Location (Zv9):
Chromosome 7 (position 73157358)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 70151126
GRCz11 7 70601391
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGACAGCTATGAGGAATACCAGCACGAGCGTCTGAAGCGAGAGGAGTAC[C/T]GACGCGACTATGAGAAACGGGAATGTGAGAGGGCCGAGCAGAGGGAGAGA
Long Flanking Sequence:
TCATGTCATTTGAGAAATATTTTTGTTTTTCACACAATAATGCCTCTTGTACATAGTCGTGTTATCCTTTAGGAGAAGCCTGTGTCATTTTCAGTCAATTGCTGGTTGAATAAAAGTAATTTAAGTAAGAATTGAAGAAGGTATGAATAATTTAGGGCTTGGAAATATATTTAAATAATAAAATATATATATAAATAATAAACTGTTTGATTGGGAAAATGAAAACTGAAGATCTGCATTTTATTTCTGGGAAAATATTTACACATTATTTCACATTTTAGATGTTTTCTGAAACTCTAGAGGAGACTCTTGATATTACTGTGGAGTTTTTCTAAGAAAGAATCGTCAGAGGAGCAGGAGACTGCTTTCTGTTCCTTGTTTCTTATTGTGTGTTTAGAGAACACTTGATGTGATTTCGTTCTGCAATGTTTTGTCATTTCAATTCTAGGTATGACAGCTATGAGGAATACCAGCACGAGCGTCTGAAGCGAGAGGAGTAC[C/T]GACGCGACTATGAGAAACGGGAATGTGAGAGGGCCGAGCAGAGGGAGAGACAACGGCAAAAAGCAATAGTGAGTACGCCCACCTATTTTATTCAATTATAGAATGCTTCTTCAACTACGGACACTGTTATATCCCTGTGGTTGTTTGTTATTAAACTTACAGGTTTAAACTTTTGTTAAATAAAGGGGCATAGAAAACTTTCCTGGAAACTTTTACTGCACAATTAGTTTTTGTGTCCAGAATTGAAGCAGAATCTATCATAAGGCTGAAACATGCTCATGTAAAATAAGGAGTGTAATCAGAATCAATAATAATAGTATGAGTCAAATCCATCTATCAAACAACTGGGTTTTGCTCATTTGTTACTAAGAACAATTTAAAATACAATCACATGCATTATGATTGCTGAATGAATTATTAATAAATCAATGAATAATTAAAAATGAAACAATACATCTATGTACTCTGCAAAATATTTTTCTGTTGCTCAGAGGTTGCTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7107
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000097710 Nonsense 734 873 10 13
Genomic Location (Zv9):
Chromosome 7 (position 73157332)
Other Location(s):
Assembly Chromosome Position
GRCz10 7 70151100
GRCz11 7 70601365
KASP Assay ID:
554-5312.1 (used for ordering genotyping assays)
KASP Sequence:
GAGCGTCTGAAGCGAGAGGAGTACCGACGCGACTATGARAAACGGGAATG[T/A]GAGAGGGCCGAGCAGAGGGAGAGACAACGGCAAAAAGCAATAGTGAGTAC
Long Flanking Sequence:
TTTTCACACAATAATGCCTCTTGTACATAGTCGTGTTATCCTTTAGGAGAAGCCTGTGTCATTTTCAGTCAATTGCTGGTTGAATAAAAGTAATTTAAGTAAGAATTGAAGAAGGTATGAATAATTTAGGGCTTGGAAATATATTTAAATAATAAAATATATATATAAATAATAAACTGTTTGATTGGGAAAATGAAAACTGAAGATCTGCATTTTATTTCTGGGAAAATATTTACACATTATTTCACATTTTAGATGTTTTCTGAAACTCTAGAGGAGACTCTTGATATTACTGTGGAGTTTTTCTAAGAAAGAATCGTCAGAGGAGCAGGAGACTGCTTTCTGTTCCTTGTTTCTTATTGTGTGTTTAGAGAACACTTGATGTGATTTCGTTCTGCAATGTTTTGTCATTTCAATTCTAGGTATGACAGCTATGAGGAATACCAGCACGAGCGTCTGAAGCGAGAGGAGTACCGACGCGACTATGAGAAACGGGAATG[T/A]GAGAGGGCCGAGCAGAGGGAGAGACAACGGCAAAAAGCAATAGTGAGTACGCCCACCTATTTTATTCAATTATAGAATGCTTCTTCAACTACGGACACTGTTATATCCCTGTGGTTGTTTGTTATTAAACTTACAGGTTTAAACTTTTGTTAAATAAAGGGGCATAGAAAACTTTCCTGGAAACTTTTACTGCACAATTAGTTTTTGTGTCCAGAATTGAAGCAGAATCTATCATAAGGCTGAAACATGCTCATGTAAAATAAGGAGTGTAATCAGAATCAATAATAATAGTATGAGTCAAATCCATCTATCAAACAACTGGGTTTTGCTCATTTGTTACTAAGAACAATTTAAAATACAATCACATGCATTATGATTGCTGAATGAATTATTAATAAATCAATGAATAATTAAAAATGAAACAATACATCTATGTACTCTGCAAAATATTTTTCTGTTGCTCAGAGGTTGCTATTTTTTGTAAGCGTTTTATATCAGTT
Associated Phenotype:
Not determined