ZMP
ift80
Ensembl ID:
ZFIN ID:
Description:
intraflagellar transport protein 80 homolog [Source:RefSeq peptide;Acc:NP_001008625]
Human Orthologues:
IFT80, RP11-432B6.3
Human Descriptions:
Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:C9J614]
intraflagellar transport 80 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:29262]
intraflagellar transport 80 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:29262]
Mouse Orthologue:
Ift80
Mouse Description:
intraflagellar transport 80 homolog (Chlamydomonas) Gene [Source:MGI Symbol;Acc:MGI:1915509]
Alleles
There are 6 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa35783 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa35782 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa35781 | Nonsense | Available for shipment | Available now |
sa13176 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa35783
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056763 | Nonsense | 3 | 777 | 2 | 20 |
ENSDART00000133943 | Nonsense | 3 | 777 | 2 | 20 |
The following transcripts of ENSDARG00000038879 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 1529072)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 1568957 |
GRCz11 | 15 | 1533866 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGGACATTACCAGAGTAAAACACCAGAGGAGACGCTGAAGGATGCGAT[T/A]GAAAACATCGTTGCTGAAGGAGCCCAAACATATCCTTTAAATTACTGCGT
Long Flanking Sequence:
CTGTGAAAATAAATAAATATAAAAAATAAAAGTTAAATGTTTATTATGTTTTCATTCATTGCGCAGATCGCTCTCAATCTCGCGAGAAGTAGGATATCAGACCAGATAGAACTCGTTCTCGCGAGACGTGGGGCCAGAGTTGTTTTACCGTCAGTAATCTTTCTAGTATGCTGCTACTAAGAAATCTGTAACGACTAAAAGGAGATTTGGGATGTAATAAAGCGGCTAGAGTGTACTCAGAAAGTGCCCCTCATCACTATGGTCAGCATCTACATTATCCAATGCTTCAAATATGAGTTTGTCTGGAGCTCGTTAGCGCTGTAGTAACAACGCGTTTCCGTGGCAACGACGCCTTCAGCAGTCAGGTAAACACGGTACATGCTAATGCTAACGATACGCTGTTCTTGCTACTAGTCAATTTTCTGTTTTTTCATCTTTTCTTTTTATAAACAGGGACATTACCAGAGTAAAACACCAGAGGAGACGCTGAAGGATGCGAT[T/A]GAAAACATCGTTGCTGAAGGAGCCCAAACATATCCTTTAAATTACTGCGTTATATTCATACCACTTTTCAACACACACATACATTTAGTATGAAATTGTTGATAACATATGTATCATGCCAGAGTGTCCAGGAATATTAGCTGATTTCCACTTTCGTGCAGTGATTATAATGGTGAATTGAGTGCTTTTAAAGAGATAGTTCAGCCTAAAATGAAAACTTACTGCCCCTTAGGTGGATCCAAACCTTCATTACTTACTTTGCTCTGTTGAACACAAATGAATATATTTTGAAGTATGTTAGAAACCTGTAACCATTATTATTGATGTAAAGTGGGTTTTATATTTGCACATTCCTTCAGTGACAACTTGTGAAAAGCTTTCCATAATATTTACCACGGTACTTTAAATATTCAGCCTGAAATCGCATGCAAGAATGACTTGAAAAGAACATTAGCGCTATTTAATTGACTGTGAACAATGTTCTACTTTAATAGTCATTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35782
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056763 | Nonsense | 400 | 777 | 12 | 20 |
ENSDART00000133943 | Nonsense | 400 | 777 | 12 | 20 |
The following transcripts of ENSDARG00000038879 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 1501705)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 1541590 |
GRCz11 | 15 | 1506499 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGACACTTTCTGTTGGTGGATGGAGCGGAGGTGTATGTGTACTCGTAT[G/T]AGGGTCGTCTGATTTCATCCCCCAAGAGTCCCGGCATGAGAATGGACATC
Long Flanking Sequence:
TTAATAGCTAATTTCTAATCACTGATTTATTTTCATCATGCCATGATGACAGCACATAATGTTTGACTAGATCTTAATATTATTAGTACTAGTATTCAGCTTAAAGTGACATTTAAAGGCTTCACTAGGGTAATTGGGGTAAAGTTAGGGTAATTAGGCAAGTCATTGTATAACAGTGGTTTGTTCTGGAGACAATCCAAAACTAATATTGCTGAATAATATTGACCTTAAAATGACTTTAATAAATTAAAAACTGCTTTTATTCTAGCTGAAATAAAACAAATAAGACTTTTTCCAGAAGAACAAATATTAGAGGAAATACTGTGAACAATTCCTGAATCTGCTCAACATCATTTAGGGAAATAACTGAAAAAGTAAATAAATTCACAGGAGGATTAATAATTCTGACTTCAAATGTATGTTTGTTTTTTTCTATGTTTGTGGTCTGCGTCAGACACTTTCTGTTGGTGGATGGAGCGGAGGTGTATGTGTACTCGTAT[G/T]AGGGTCGTCTGATTTCATCCCCCAAGAGTCCCGGCATGAGAATGGACATCCTGAACTCTCAGTCCATCTCGCTGAGCAACGACACCATCGCTATACGGGACACCACTGATGAACGAGGTGCAGATTTACAGTACTGCATGCATGACTGGAGTGTATACTGAAGCTGAAACTTGCATGCAAAGCTGACTGTTGTAGTTAGCTACTCTATATATAGGGTTTATACCGTCCTGAATTTTTGGCTTTTTTTTTTTTTGTGGCAATCTTCAGGCCTGGAAATGTTTTGGAAAAATGAGTAAACTTGGGCTGCACAATCTACCGTTTCAGCATCAATATTGCAATGTGTGTGTCCGCAAAAGTCACATCACATGATATGTAATGTTAAACTGAATTATAGGTGATCAACAATTGAGAAAACATGAGATTTGAGATTTTATATGCTGTTATTGCAACATTTAACCATAACAGAGTGAAACTTTGTCATTTGCATGTGTTTTAAAAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35781
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056763 | Nonsense | 438 | 777 | 12 | 20 |
ENSDART00000133943 | Nonsense | 438 | 777 | 12 | 20 |
The following transcripts of ENSDARG00000038879 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 1501591)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 1541476 |
GRCz11 | 15 | 1506385 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCATCTCGCTGAGCAACGACACCATCGCTATACGGGACACCACTGATGAA[C/T]GAGGTGCAGATTTACAGTACTGCATGCATGACTGGAGTGTATACTGAAGC
Long Flanking Sequence:
AAAGGCTTCACTAGGGTAATTGGGGTAAAGTTAGGGTAATTAGGCAAGTCATTGTATAACAGTGGTTTGTTCTGGAGACAATCCAAAACTAATATTGCTGAATAATATTGACCTTAAAATGACTTTAATAAATTAAAAACTGCTTTTATTCTAGCTGAAATAAAACAAATAAGACTTTTTCCAGAAGAACAAATATTAGAGGAAATACTGTGAACAATTCCTGAATCTGCTCAACATCATTTAGGGAAATAACTGAAAAAGTAAATAAATTCACAGGAGGATTAATAATTCTGACTTCAAATGTATGTTTGTTTTTTTCTATGTTTGTGGTCTGCGTCAGACACTTTCTGTTGGTGGATGGAGCGGAGGTGTATGTGTACTCGTATGAGGGTCGTCTGATTTCATCCCCCAAGAGTCCCGGCATGAGAATGGACATCCTGAACTCTCAGTCCATCTCGCTGAGCAACGACACCATCGCTATACGGGACACCACTGATGAA[C/T]GAGGTGCAGATTTACAGTACTGCATGCATGACTGGAGTGTATACTGAAGCTGAAACTTGCATGCAAAGCTGACTGTTGTAGTTAGCTACTCTATATATAGGGTTTATACCGTCCTGAATTTTTGGCTTTTTTTTTTTTTGTGGCAATCTTCAGGCCTGGAAATGTTTTGGAAAAATGAGTAAACTTGGGCTGCACAATCTACCGTTTCAGCATCAATATTGCAATGTGTGTGTCCGCAAAAGTCACATCACATGATATGTAATGTTAAACTGAATTATAGGTGATCAACAATTGAGAAAACATGAGATTTGAGATTTTATATGCTGTTATTGCAACATTTAACCATAACAGAGTGAAACTTTGTCATTTGCATGTGTTTTAAAAGCATTTGAAGATTATAAAACATTCATGCACAATAACTAAAAACATCTGAAACTTTAATGAAGAAAATCCTACTGATTTATTAATATAATGAAGACTATACAGTGTTATTTTACATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13176
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000056763 | Essential Splice Site | 612 | 777 | 16 | 20 |
ENSDART00000133943 | Essential Splice Site | 612 | 777 | 16 | 20 |
The following transcripts of ENSDARG00000038879 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 15 (position 1494893)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 15 | 1534778 |
GRCz11 | 15 | 1499687 |
KASP Assay ID:
2260-8033.1 (used for ordering genotyping assays)
KASP Sequence:
CAGCAGCGCCCGCTGGGAGGATGCTCTCCGCATCTGCCGCTTCGCCAAGG[T/G]CAGCACAGCAYTCACTATAYCCTTGTTCAGTCACGACGTATGGAAAACAA
Long Flanking Sequence:
TTTGATAAAGCAGTTAGCTAAAGCAGTTTTTGGTAGAGGTACTCTGTAAATGGCTGTTGTCATGACGATCGTTGCAGACAGCGTGTGAACCTAGTTAGAGGGTTAGCTAAACTGTAGCCGCAGCTGAAATGAATGCTGTGAGGAAACTACTCCTTAAGAGAATGAATGCCATGATCATATGAATTTAAGAGTGACCGATTAAATCAGTTTTGATGTACAAGTAAATTTGAAGTAAAGTAAATATTCTAAAGGTCAGCGAGAGGCTATACCGTTTCAGTTAAGCAAAAGCTCAAACATGGGTAAATAAAAGAATCTTGTCTTCTGCAGTGAGTTCAGTCGTCCTCCTCAGATGGTGAGCTATGTGGGCAGTCAGGTGACCGTCAGACGTGTGGACGGCTCTCTGGTATGCACTGCGGTGTCACCGTACCCCACTTTACTGCATGAGTACACCAGCAGCGCCCGCTGGGAGGATGCTCTCCGCATCTGCCGCTTCGCCAAGG[T/G]CAGCACAGCATTCACTATACCCTTGTTCAGTCACGACGTATGGAAAACAACTCAATTGATAACACTGTCTCCTAACAAAACACGACAAGATTCCAGTGGCAAGCAAATCGTCTGTCCACATCAAACACGACATTTAAAACACCAACCACTGCACTCCCAATGCTTTTAATCAAATAATACCTACTAAACCTTGTTTAAGATGATTATTAGGCTACTGAGGGACTGATGTTGTTGGTTTGCACTCTGAATTTCATTTTCGAAGCATCTGCTAGTTATTTTACTGCCTATTTTTGCTGCTTTGAGTATGGCAATAAATGTCAGGTAAAATGTATTTAAACCAAGCGGCAACCTCCCGCTCTCCCTCAGGAAGCCAATATGGAAGTAACTAAAACTGCAATTCATCCGAAATCGTGGCCGCTCCTGCCTCCAAAACAGAGCAAATTTCAATTGAGCCCACTGTTAGAATGGCCAACTTTACAGCAGAATAAAGGTGTTTACAG
Associated Phenotype:
Not determined