ZMP
atg4c
Ensembl ID:
ZFIN ID:
Description:
cysteine protease ATG4C [Source:RefSeq peptide;Acc:NP_001002103]
Human Orthologue:
ATG4C
Human Description:
ATG4 autophagy related 4 homolog C (S. cerevisiae) [Source:HGNC Symbol;Acc:16040]
Mouse Orthologue:
Atg4c
Mouse Description:
autophagy-related 4C (yeast) Gene [Source:MGI Symbol;Acc:MGI:2651854]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa13109 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa13109
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051779 | Essential Splice Site | 410 | 463 | 10 | 11 |
| ENSDART00000127879 | Essential Splice Site | 410 | 463 | 9 | 11 |
The following transcripts of ENSDARG00000044373 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 6 (position 31995864)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 6 | 32316780 |
| GRCz11 | 6 | 32303694 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACTCAAAAAGTGTTGAACACTTTGAAAAAATTGCCAATGAACTGTCAAAG[G/A]TGAGAAAACTNNNNNNNAATGTTTTAACATTAATATTGTTTTGATAAGCC
Long Flanking Sequence:
ATTTTTACGTTTTTTTTTGTGCGCTGTGGAAAGTGGCTTGGCGAAAGGCAGAAATATTAGGCCATACTTTTAGCTCAGCTGTCCAAGCCTTTCAGATCTCGGGCAGAATTCAACATTTGTCAAAAAATGTGTCAAAAAGTGGAATCTTTTATTTCTGCAATTTGAACGTTTCACATGAACGCACATCGATCATTCGGAACCGCACTGGCTGATCGGTTTAACACACCTATTACTGTTTAGATGGACATTATGGATGAAAATTTATAGGTTATGCTTCTGATGTGCATATGGATCACTGTGATTTCACAAACATGGGAAACAGGTGGCTTTGTGTGACTCATTTCAATTGATATCTTATCTTTTTGTTTCCATCTTCAAAGTCGTTTCATTGCCCATCACCAAAGAAAATGTCTTTCAGTAAAATGGACCCGAGCTGTACGATTGGATTCTACTCAAAAAGTGTTGAACACTTTGAAAAAATTGCCAATGAACTGTCAAAG[G/A]TGAGAAAACTTCAGCAAAATGTTTTAACATTAATATTGTTTTGATAAGCCGATTTGTTTTACATCAAAAATTTGTCAGAATAAGACAAAAATAAGAACATGAATGCATTATATTGTGAGGACTTTATTGTAAAGTGTAAAGACACCTTAATTAAGGCGACTAAGTATTAATATAGACTATTTTGAGGGATGTAAACAAAAACAATGGTTTTTCTGTTATTTCTGCTATTTGTTCTTTTTTATTGCTTCTGAGAAACCAGAAAGCTTCACATATTGATAAATAATGTTATGATAGCTGTTTTAACATTAAGTTATGATTGAATTACCTATTTTTACAGTGATGAAATAGTTTGATAACAAGCAGGAAATGTTTATAGGCCAATGACATCACCACATTGAAATGGTCTATATATGATATATTATTAAGAGTCTATATCAGAGATGCTCAAACTAGTGCCCAAAGTTGACCCCCAGTAACCTTCGATTTGACCTGCCATACAT
Associated Phenotype:
Not determined