ZMP
si:ch211-156p11.1
Ensembl ID:
ZFIN ID:
Description:
Novel NACHT domain containing protein [Source:UniProtKB/TrEMBL;Acc:A8HAM9]
Human Orthologue:
NLRP6
Human Description:
NLR family, pyrin domain containing 6 [Source:HGNC Symbol;Acc:22944]
Mouse Orthologue:
Nlrp6
Mouse Description:
NLR family, pyrin domain containing 6 Gene [Source:MGI Symbol;Acc:MGI:2141990]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa43771 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa13046 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa43771
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105988 | Nonsense | 305 | 871 | 3 | 14 |
| ENSDART00000141625 | Nonsense | 497 | 671 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 9154586)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 9185662 |
| GRCz11 | 22 | 9215344 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTACCCAGATCTTTAAGGAGGAAACAGGGATTGCTCTTGGTACCATGTA[C/A]TGCTTTGTTCACTTGAGCATTCAAGAGTTTATTGCAGCCATTTATGCACA
Long Flanking Sequence:
TTCAGAAAAAGACTCACAGATGAGAATCAGGCCAAAGAAATCATTGATCACATTAAACAATCAAAGAGTCTCTTCATCATGTGCCACATCCCAGTCTTCTGCTGGATTTCAGCCACTGTTCTCCAGAACATTTTACAGGAGAAGAGAAATAATGATGTGAAACACAATCAGGCTGATGACGCCTCCAAAACACTGCAGGAATCAAACACTGAAGACACTCCCAAGACTCCGACACAAATGTACACACACTTTCTGCGCTTTCAGATCCAGCAGAGCAGACGAAAGTATGATGGAGAATACACACCAGATGTTTCCTGGGATAAAGACGCCATCCTTTCACTGGGAAAACTGGCATTTGATAACCTGCAAAGAAATAACCTGATTTTCTATGACACAGACCTGGAAGCCTGTGGTATTGACGTCTATAAGGCCTCAGTTTACTCAGGCATGTGTACCCAGATCTTTAAGGAGGAAACAGGGATTGCTCTTGGTACCATGTA[C/A]TGCTTTGTTCACTTGAGCATTCAAGAGTTTATTGCAGCCATTTATGCACATCTGATTCTGGACATCAACAAGAAAAGTGTGTTTGATCAAGACTCTAACAGCAGAAATGAGTCCATGATTGATTTGCTGAAGACTGCAGTGAACAAGGCACTTGAGAGTGACAATGGACACCTGGACCTTTTCCTTCGCTTCCTTCTCGGTCTGTCACTGCAGTCCAATCGAAGACTCTTACGAGGTCTGTTGACACAGCGAGATGAAATTAACCAGATCAAAGAGGAAATAGTTCAGTACATCAAGCAGAAGTTTGAAGCGAATCTTTCTCCAGAGAGGTCCATCAATCTGTTCTACTGTCTGAATGAACTGAACGACCAAACTCTGGTGAAAGAGATTCAGACTCACCTTAGCAAAGGAAGTCTCTCATCTGCTGATCTTTCACCTGCCCAGTGGTCTGCTCTGGTATTTGTGTTGTTGACATCAGAGGAGGAAATGGAGGAGTTTGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13046
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105988 | Nonsense | 815 | 871 | 13 | 14 |
| ENSDART00000141625 | None | None | 671 | None | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 9164650)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 9195726 |
| GRCz11 | 22 | 9225408 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCTCAGCTGKAATGAACTAGSAGACTCTGGAGTGAMAAACCTCAGTGATT[T/A]ACTGATGAAGCCACAATTCARGCTGGAGAAACTACAGTTAGTATCATTAT
Long Flanking Sequence:
TCATTTATTTTATAGTGCATTTTAAAATATAACAATTATTTTTATTTTCTTTTTATTCCTATTTATTTTTTTCTATATGATTTAATTACTTGCAATCTTTAATTGTTAAGCTTTTGTTTTGGTGGGTAGATACTAGCTGGCAAGTTTGTGTTTCGCGTTTAAGAAACACTTTAAAAAAATAGGGCGACTACAAACTTGCATTAAATCTTTTGTCCTTGTGCTCTCTTGCTTTGTTCATTCATATAATTTTCCATGATTTTACAGGTCTGTTTTTTGCTGACTGTATTTTAAACAGTTATATATTTATTTCACAAATGAACTTAACATGGATTTCAGTCGTTGTCTTTCTGTTTCTGTCTTCAGTCTGTGTAACTGCAGTATTACAGAGGAACAGTGTGTGATCCTGACTTCAGCTCTGAAATCAAACCCATCACACCTGAGAGAACTGAACCTCAGCTGTAATGAACTAGCAGACTCTGGAGTGAAAAACCTCAGTGATT[T/A]ACTGATGAAGCCACAATTCAGGCTGGAGAAACTACAGTTAGTATCATTATACCGTGCAGTAGATACTGTGAAATTAAAGATTATCAAGTAGGAATCAAGTAACATCAGTTATAAACATGGTTGCTATAAAAGGGCATGCAAACTTGTCACACTTTTATTGAGTGGACAGTTCCTGTGGAGTTACCATGTATGTACACTGGTATCACAAGATGAAACCTTCTAATGCAGCATTAGTTCTGCCATGCATTGCTCACAAGTACATGGTATGCAAATAGGTGTGGAAGTGGGAAAACACCTGTAAGTACATGTCGTTACGCAATGCACGTACATAATTCTTGTTCCAGATGTGTACTTTCTTAGTGTTGTTAATGTCCTGTTACACATTTGAACCTACACATACTATTCAGCGGGTTGTTACATTTGTGTAGATACACCAGTATTACACAAGTAAATACTATGTATCAGTATGTACATACACTGTAGTTACATACTAAATACAC
Associated Phenotype:
Not determined