ZMP
il1rapl1a
Ensembl ID:
ZFIN ID:
Description:
Interleukin-1 receptor accessory protein-like 1-A [Source:UniProtKB/Swiss-Prot;Acc:B6ZK76]
Human Orthologue:
IL1RAPL1
Human Description:
interleukin 1 receptor accessory protein-like 1 [Source:HGNC Symbol;Acc:5996]
Mouse Orthologue:
Il1rapl1
Mouse Description:
interleukin 1 receptor accessory protein-like 1 Gene [Source:MGI Symbol;Acc:MGI:2687319]
Alleles
There are 11 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa15551 | Essential Splice Site | Available for shipment | Available now |
sa34668 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa21502 | Nonsense | Available for shipment | Available now |
sa41443 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa34667 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa13024 | Nonsense | Available for shipment | Available now |
sa12814 | Nonsense | Available for shipment | Available now |
sa34666 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa5821 | Nonsense | F2 line generated | Not yet available |
sa2524 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa15551
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Essential Splice Site | None | 701 | 2 | 13 |
ENSDART00000101171 | Essential Splice Site | None | 716 | 2 | 14 |
ENSDART00000134157 | Essential Splice Site | 3 | 744 | 2 | 14 |
ENSDART00000138574 | None | None | 550 | None | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30963931)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 30119877 |
GRCz11 | 9 | 29930623 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTCTTAGTCCGGGCCTGACAACACGAGAYCYTCCTGAAGAATGAATGAG[G/A]TAAGTCTCTCTCTTTTTTTACACAATTGTGYTAACAAACTTGTTCATAAM
Long Flanking Sequence:
AATCCAGCTTCTGATGAACTCATTCTTTTTTTCCCCAATACATATCAGATTGGAAATACATTTATTTTTATTAGAAAAGAAATAAAAAATTAAAACTATGATAATGTGATATAAAGTCACAAGTGGCTTGTGGGTATTTGATAAGGTTTAGCTTATTTCATATGCTTTAGTACTGCTTCAGTGAACTTGAACAAGTATATTAAAAACCATTAATTTTCAATAATTTTATTAGTTTTTTTTAAATCAAAGTGTGCTTAAAATGCCTTAAAAATAAGTAAAATCTTTGTAGACTATAAATATATCTATGTATATCATTTATTTAAAAAATGCAGGCAATACATTATAGATTAATTTCATTAAAAATATTTTATTATTCTTATTTTTTTTTGCAACTTCAGGGGTGCAGCCAGGTAAGGGGCCAAACAAGACAATGTGCCCAGGGGCCTCTGAATTCTTAGTCCGGGCCTGACAACACGAGACCTTCCTGAAGAATGAATGAG[G/A]TAAGTCTCTCTCTTTTTTTACACAATTGTGCTAACAAACTTGTTCATAAACACCCTATCACACTCATAGCATTGCGATATGGCTCTATATCAACATGGCTGAGCACAATCACAGCTACTAATTGTGTTATTGCTCATTTACTCTAAGAAGGTACTGTACAAGCAGATACTATATATTTTTAAACGTATTGACCATGGGTTTGGTACTGACCATATAGTTTAACCATAGCATCTGTAGTTAAACTGAAATCATAAAGATTGCTAAACAATATGGCAACAACCCAGTTATTGCAATGTTTCTATAATAAAAAAAAAAAAACTATGTAGAACTATATGTCACATGGCAAATACAAATGCATGTATCTAATTTTTGTCACATAGGAATGAGAGCTTCCTTTTTTTGAGAGTTTCTTTTTCTTTTTTCCCCTTTGCTTACATTTTTTGTTTGGTGTTTACATCTGAAAAAAGTGTAAAAAAAAAAAAAAGTGTAGTAATGTGAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34668
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Nonsense | 39 | 701 | 5 | 13 |
ENSDART00000101171 | Nonsense | 39 | 716 | 5 | 14 |
ENSDART00000134157 | Nonsense | 67 | 744 | 5 | 14 |
ENSDART00000138574 | Nonsense | 39 | 550 | 2 | 10 |
ENSDART00000089206 | Nonsense | 39 | 701 | 5 | 13 |
ENSDART00000101171 | Nonsense | 39 | 716 | 5 | 14 |
ENSDART00000134157 | Nonsense | 67 | 744 | 5 | 14 |
ENSDART00000138574 | Nonsense | 39 | 550 | 2 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30832342)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29988288 |
GRCz11 | 9 | 29799034 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTTTCTTTCTCTCTGCAGTGGACGGCTGCACTGATTGGTCCGTGGACTA[T/G]CTGAAGTACCGGGTGTTACACGGAGAGCCGGTGCGGATAAAGTGTGCTCT
Long Flanking Sequence:
AACTGTAAAGTTTCCTCACTCTGTACACCCCTGATGTTGTTGGCAAATGAGCATGGTTTGTAATTTTGACAATTTCAACTCGACATATGGGTGAAGCTAGTGTAAACATCCTCTGGCAGCAGTGTGGCCTATTTCCACTTAGATACTCTGTAATTAAAAAAGTCAGTTTTTATTATTTGTATGCCTTATGAAGGTCTGTTCACATCAAGAATGACAATTATAATTATTGCTATTTAACAAATGTTAGCATTCTGTATATTAAGTAGCAGTTTTGTTATCTACTGCTTCAAAGTCATGTGGATTTCAATGCGCTGGCAATATTCACAGTAGCTACATAATAACAGTACATATATAATACAACATAACAATATCCTTAATCCAGAGCTTGACTAAACAATTATCTTGTCTAGAAATCTATGTGCTTCCCCTTCTGTTAACCTTTCCTTAAACGTTTTCTTTCTCTCTGCAGTGGACGGCTGCACTGATTGGTCCGTGGACTA[T/G]CTGAAGTACCGGGTGTTACACGGAGAGCCGGTGCGGATAAAGTGTGCTCTATTTTACGGTTATATAAGAGCCAACTACACCCAGGCACAGAGCATTGGACTCAGTCTGATGTGGTACCGAAGTTCAGGATTGGGACATGGGGACTTTGAAGAGCCCATCTCCTTTGACGGGACCCGCATGAGCAAAGAGGAAGATGCCATCTGGTTCCGGCCTGCCGAGCTGCAGGACGCCGGTCTGTACTCCTGCGTTTTGAGGTGAGAAATAGAGATGTGTGCGCACATGTGTATGCGTGAACACTCATATGCTTAGATATGCAAATCCACGGGGAGAAACACACACACGCACATACACACACTCTGCCTTTCGGACATTAGCAGTATCCGAAAACATGCTTAACTTCCTGCTTTGATGTTTCCTGATTGTCTTTGAAAGCCTTCAAGAAAAGTGTCATGCTGAGAAAATTAGTGTGTGTGTATTAGTGTCTGCTCTTCTTCAGTGTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21502
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Nonsense | 39 | 701 | 5 | 13 |
ENSDART00000101171 | Nonsense | 39 | 716 | 5 | 14 |
ENSDART00000134157 | Nonsense | 67 | 744 | 5 | 14 |
ENSDART00000138574 | Nonsense | 39 | 550 | 2 | 10 |
ENSDART00000089206 | Nonsense | 39 | 701 | 5 | 13 |
ENSDART00000101171 | Nonsense | 39 | 716 | 5 | 14 |
ENSDART00000134157 | Nonsense | 67 | 744 | 5 | 14 |
ENSDART00000138574 | Nonsense | 39 | 550 | 2 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30832342)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29988288 |
GRCz11 | 9 | 29799034 |
KASP Assay ID:
2260-1947.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTTTTCTTTCTCTCTGCAGTGGACGGCTGCACTGATTGGTCCGTGGACTA[T/G]CTGAAGTACCGGGTGTTACACGGAGAGCCGGTGCGGATAAAGTGTGCTCT
Long Flanking Sequence:
AACTGTAAAGTTTCCTCACTCTGTACACCCCTGATGTTGTTGGCAAATGAGCATGGTTTGTAATTTTGACAATTTCAACTCGACATATGGGTGAAGCTAGTGTAAACATCCTCTGGCAGCAGTGTGGCCTATTTCCACTTAGATACTCTGTAATTAAAAAAGTCAGTTTTTATTATTTGTATGCCTTATGAAGGTCTGTTCACATCAAGAATGACAATTATAATTATTGCTATTTAACAAATGTTAGCATTCTGTATATTAAGTAGCAGTTTTGTTATCTACTGCTTCAAAGTCATGTGGATTTCAATGCGCTGGCAATATTCACAGTAGCTACATAATAACAGTACATATATAATACAACATAACAATATCCTTAATCCAGAGCTTGACTAAACAATTATCTTGTCTAGAAATCTATGTGCTTCCCCTTCTGTTAACCTTTCCTTAAACGTTTTCTTTCTCTCTGCAGTGGACGGCTGCACTGATTGGTCCGTGGACTA[T/A]CTGAAGTACCGGGTGTTACACGGAGAGCCGGTGCGGATAAAGTGTGCTCTATTTTACGGTTATATAAGAGCCAACTACACCCAGGCACAGAGCATTGGACTCAGTCTGATGTGGTACCGAAGTTCAGGATTGGGACATGGGGACTTTGAAGAGCCCATCTCCTTTGACGGGACCCGCATGAGCAAAGAGGAAGATGCCATCTGGTTCCGGCCTGCCGAGCTGCAGGACGCCGGTCTGTACTCCTGCGTTTTGAGGTGAGAAATAGAGATGTGTGCGCACATGTGTATGCGTGAACACTCATATGCTTAGATATGCAAATCCACGGGGAGAAACACACACACGCACATACACACACTCTGCCTTTCGGACATTAGCAGTATCCGAAAACATGCTTAACTTCCTGCTTTGATGTTTCCTGATTGTCTTTGAAAGCCTTCAAGAAAAGTGTCATGCTGAGAAAATTAGTGTGTGTGTATTAGTGTCTGCTCTTCTTCAGTGTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa41443
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Nonsense | 167 | 701 | 6 | 13 |
ENSDART00000101171 | Nonsense | 167 | 716 | 6 | 14 |
ENSDART00000134157 | Nonsense | 195 | 744 | 6 | 14 |
ENSDART00000138574 | Nonsense | 167 | 550 | 3 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30825322)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29981268 |
GRCz11 | 9 | 29792014 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGCGCTACACTGAGAAAGGAGAGCTGGGCAAGAGTAAAGACATCTCCTG[T/A]CCCGATATCCAGGATTACGTTCAGCCTGGAGAAAAACCACAGATAACGTG
Long Flanking Sequence:
ATTTGACTTCGAAAAGCATTAGCGAACATTGCAAGTGGACCTCGGGGAAAATGTAAGTGATAAAAAATGTATGAAATGACCCTTTAAAACCTTTGAGGAAACATTTTCTATTCATTTGCTTCTCATATTCCATCAGTAAAGTGCTAATTATTTGTAGCCCTATATGAAAACTGCAGAGAAATTCAGCTCCTTTGTGGTCAAATTACACCTATCATGCTTGAATAACAAATAAAATCAGGTTTTATATTTGTGTAATTGGTTTAGTGTATAGGCTCTGCGAGATGACAGCACATTTGCGCTCAGTGATGTCTCTGGGTGAGCTCTATAGTTTATATAGGCTTACTCTGTTTGTTTGTGTGTGTGTTTTGCAGGAATTCCACGTTTTGTATGAAGGTGTCAATGACTCTGTTGGTTGCTGATAATGACACAGCTGGATGTTACAACTCAAAACTGCGCTACACTGAGAAAGGAGAGCTGGGCAAGAGTAAAGACATCTCCTG[T/A]CCCGATATCCAGGATTACGTTCAGCCTGGAGAAAAACCACAGATAACGTGGTACAAGGTATAGTGGGAGTTGCTAAGAGGTGTATTCAGTATACAGCGCACAAACCTGCGTCTTAAAGCACTTGCGATCCAGCATCTTGGCATCTGCCCCCCTGAGAATTTCAATTAAGTCATCGTAAGTCATTGTCAACGCAAACACACCTCCTTTTTATGTAAATTAGGGTTATTATACTTTATGCCTTATTCAGGGAAGTCAGCGCTATTTGCCTGGGGCAGCTAACAGTATGCTTTTACTGCACACGGAAAGCCGTAAACAGAAAATTATTTAAAACTGAGTGTTTATGTAGATATTCAATCGATCATGGGAGCAGTAATTCATCAGATGATGATCGAATTTGCGGAGGGGCAATTTAGTATACAGTTGAGTGCCTTTTCTGCATTTTAAAGAGAGGATTTAGGTGTCTGGATTGCAGTGTTGCAACAGTGACCTACAGATCAGGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34667
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Essential Splice Site | 238 | 701 | 8 | 13 |
ENSDART00000101171 | Essential Splice Site | 238 | 716 | 8 | 14 |
ENSDART00000134157 | Essential Splice Site | 266 | 744 | 8 | 14 |
ENSDART00000138574 | Essential Splice Site | 238 | 550 | 5 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30797374)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29953320 |
GRCz11 | 9 | 29764066 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAAATAACGCTCTGTGTGTGTATGTGTGTGTGTGTGTGTGTTTGTTTCA[G/T]CTCCTCTGACTGAAGAGCCCCCCAGGATTCTGTTTCCCTCTGAAAACAAG
Long Flanking Sequence:
CCTCGAGTTTTAAGAGTTACATAAAGCCGAATGCAAGCACACACGTATGCAGTCACGGTGTGTGTGTGTGGTATTACCAGCTCAAATCCTGTGCTTGACAAAAGCCAAGTGAACAAACACAGTCAGCGTAATCACCAAGGAGAGAGACACGTACACACCTCTGACTCGAAGGAAATGAGCTGGAATTTAGAGCATCGTGCCCACATGGGGAGAGGAAGATCTGGAGAGAGAGAAAGAGAAAAGGAAAGAAAGAGAGAGAGAGACGGATTGAAGGATGGGGGAAAAAAGAAAAGTCAAGAAGAATAGAAACGAGAGCACTGGGGAGACCAAGACAATTCTCGCTGAGATGTTGATGGCGAGATGCTGGAGTTTACTCATCCAATCACGAACGTGTGGGCAGAGAGAGGGAGAGAGTGTGTGCTTCATCAGAAGTGCTTGATGTCACTTAGTAAAAATAACGCTCTGTGTGTGTATGTGTGTGTGTGTGTGTGTTTGTTTCA[G/T]CTCCTCTGACTGAAGAGCCCCCCAGGATTCTGTTTCCCTCTGAAAACAAGCTCCTCGCCATGGACGTGCAGCTCGGTAAGCACAGCTTCCGCTTGTGGATGTGTGTGTTTGTGTTGAGGAGGGGTGTTCGCCGTGGCATGTACTATTTTTTGAAAGAACGCAGGATATGATGTGTTTGCTGTGCAGAATATGCAAATTTCCTGAATGCATGGATTACCCAGATAACCTACTGCATTTGTTAAAATGCACAATATATAGCCAGTGCACACTGCGTGGAATATTGCATCCCATGATGCACTGCACTCGACTTGACCTTCTATTTTCCAGGGTGACAAAAATACTGGAGGTGATATCAATCATGTTTTTATTCCACGCGATTTGAATGGCTGATTCAATTTTTACAATGGGTCTGCCAAAATGAAAATGATTATGTATTTGATTCTGAAAAGCGCTGGAAAGCTCTGTGAATTAAACATTCAGGCTAATTCAAAGTGTTGTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa13024
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Nonsense | 382 | 701 | 11 | 13 |
ENSDART00000101171 | Nonsense | 382 | 716 | 11 | 14 |
ENSDART00000134157 | Nonsense | 410 | 744 | 11 | 14 |
ENSDART00000138574 | Nonsense | 382 | 550 | 8 | 10 |
ENSDART00000089206 | Nonsense | 382 | 701 | 11 | 13 |
ENSDART00000101171 | Nonsense | 382 | 716 | 11 | 14 |
ENSDART00000134157 | Nonsense | 410 | 744 | 11 | 14 |
ENSDART00000138574 | Nonsense | 382 | 550 | 8 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30755444)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29911390 |
GRCz11 | 9 | 29722136 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCGGGCTGGGTGCGATTCWCCTGCTGTTGGCGTTGTTATTGTCTGTGTA[T/A]AAATGCTACAGGATTGAGCTGCTGCTGTGCTACAGGCATCACTTCGGAGG
Long Flanking Sequence:
GCTGAAATTTCATCATTTCAGAAAAATACTTTGCATTCTGTACAGCTCCCGCTTTCAAAATTCCTTCCTTGTGTGTTTTCCAGCAGTAAAGTGCATTACATTAGATGTCTGTATTAAAATGTATTGTCAATAACATTGTAATCTTTACTTTACTTTACTTTACTTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCCAGCATTATTGCCTTAACCACACCATTTTTCACACACTAAAGAGATGCTAAGCTAATGTTAATCAAATTCAGACAAGTCTCTCTGTGTCCATTTTGTCTCTCAGTGGAGCTGATGTACACTGTGGAGCTGGCCGGCGGGCTGGGTGCGATTCTCCTGCTGTTGGCGTTGTTATTGTCTGTGTA[T/A]AAATGCTACAGGATTGAGCTGCTGCTGTGCTACAGGCATCACTTCGGAGGAGAGGATACAGACGGAGGTAAACGCTGCACACAGGACTTGCTGAGCATAACGCTGCAAGAATTACATGTTCGTCTCTGAACATCGTTACAAGTTAGATATGTATATAACCAAAGCCTAATGCGAACATTAATTCTAAGTACAATTTGGTTATAAAATAGTGACTGTATAAATAATAGTTACATTGTAACAAGAAAAAAAGTGTAAATAATGTGTAACCCTCTTCTTCATCAGAAGCATGTAAATATACTTTAAATACACTATTAACCTGTGTCATTTCTTTCTGTCTGTCTTGTTTGTATCTTTTTTTTTCAAATTCTTGTTTTTTTATTTAGTCAATTCACGTAATCTTTCTTTTAATTAATTCTTATATGTTAATTAATTTGTTAATGCTTTAATTTGTTATTTGGTCTGCCATTTGCCATTGTTTGTTGTTGACTCTTTTAAAAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12814
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Nonsense | 382 | 701 | 11 | 13 |
ENSDART00000101171 | Nonsense | 382 | 716 | 11 | 14 |
ENSDART00000134157 | Nonsense | 410 | 744 | 11 | 14 |
ENSDART00000138574 | Nonsense | 382 | 550 | 8 | 10 |
ENSDART00000089206 | Nonsense | 382 | 701 | 11 | 13 |
ENSDART00000101171 | Nonsense | 382 | 716 | 11 | 14 |
ENSDART00000134157 | Nonsense | 410 | 744 | 11 | 14 |
ENSDART00000138574 | Nonsense | 382 | 550 | 8 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30755444)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29911390 |
GRCz11 | 9 | 29722136 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGCGGGCTGGGTGCGATTCWCCTGCTGTTGGCGTTGTTATTGTCTGTGTA[T/A]AAATGCTACAGGATTGAGCTGCTGCTGTGCTACAGGCATCACTTCGGAGG
Long Flanking Sequence:
GCTGAAATTTCATCATTTCAGAAAAATACTTTGCATTCTGTACAGCTCCCGCTTTCAAAATTCCTTCCTTGTGTGTTTTCCAGCAGTAAAGTGCATTACATTAGATGTCTGTATTAAAATGTATTGTCAATAACATTGTAATCTTTACTTTACTTTACTTTACTTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCCAGCATTATTGCCTTAACCACACCATTTTTCACACACTAAAGAGATGCTAAGCTAATGTTAATCAAATTCAGACAAGTCTCTCTGTGTCCATTTTGTCTCTCAGTGGAGCTGATGTACACTGTGGAGCTGGCCGGCGGGCTGGGTGCGATTCTCCTGCTGTTGGCGTTGTTATTGTCTGTGTA[T/A]AAATGCTACAGGATTGAGCTGCTGCTGTGCTACAGGCATCACTTCGGAGGAGAGGATACAGACGGAGGTAAACGCTGCACACAGGACTTGCTGAGCATAACGCTGCAAGAATTACATGTTCGTCTCTGAACATCGTTACAAGTTAGATATGTATATAACCAAAGCCTAATGCGAACATTAATTCTAAGTACAATTTGGTTATAAAATAGTGACTGTATAAATAATAGTTACATTGTAACAAGAAAAAAAGTGTAAATAATGTGTAACCCTCTTCTTCATCAGAAGCATGTAAATATACTTTAAATACACTATTAACCTGTGTCATTTCTTTCTGTCTGTCTTGTTTGTATCTTTTTTTTTCAAATTCTTGTTTTTTTATTTAGTCAATTCACGTAATCTTTCTTTTAATTAATTCTTATATGTTAATTAATTTGTTAATGCTTTAATTTGTTATTTGGTCTGCCATTTGCCATTGTTTGTTGTTGACTCTTTTAAAAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34666
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Essential Splice Site | 404 | 701 | 11 | 13 |
ENSDART00000101171 | Essential Splice Site | 404 | 716 | 11 | 14 |
ENSDART00000134157 | Essential Splice Site | 432 | 744 | 11 | 14 |
ENSDART00000138574 | Essential Splice Site | 404 | 550 | 8 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30755376)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29911322 |
GRCz11 | 9 | 29722068 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGCTGCTGTGCTACAGGCATCACTTCGGAGGAGAGGATACAGACGGAG[G/A]TAAACGCTGCACACAGGACTTGCTGAGCATAACGCTGCAAGAATTACATG
Long Flanking Sequence:
TTGTGTGTTTTCCAGCAGTAAAGTGCATTACATTAGATGTCTGTATTAAAATGTATTGTCAATAACATTGTAATCTTTACTTTACTTTACTTTACTTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCCAGCATTATTGCCTTAACCACACCATTTTTCACACACTAAAGAGATGCTAAGCTAATGTTAATCAAATTCAGACAAGTCTCTCTGTGTCCATTTTGTCTCTCAGTGGAGCTGATGTACACTGTGGAGCTGGCCGGCGGGCTGGGTGCGATTCTCCTGCTGTTGGCGTTGTTATTGTCTGTGTATAAATGCTACAGGATTGAGCTGCTGCTGTGCTACAGGCATCACTTCGGAGGAGAGGATACAGACGGAG[G/A]TAAACGCTGCACACAGGACTTGCTGAGCATAACGCTGCAAGAATTACATGTTCGTCTCTGAACATCGTTACAAGTTAGATATGTATATAACCAAAGCCTAATGCGAACATTAATTCTAAGTACAATTTGGTTATAAAATAGTGACTGTATAAATAATAGTTACATTGTAACAAGAAAAAAAGTGTAAATAATGTGTAACCCTCTTCTTCATCAGAAGCATGTAAATATACTTTAAATACACTATTAACCTGTGTCATTTCTTTCTGTCTGTCTTGTTTGTATCTTTTTTTTTCAAATTCTTGTTTTTTTATTTAGTCAATTCACGTAATCTTTCTTTTAATTAATTCTTATATGTTAATTAATTTGTTAATGCTTTAATTTGTTATTTGGTCTGCCATTTGCCATTGTTTGTTGTTGACTCTTTTAAAAAAATTCTTTGTTATATGTATTGTGTATTGTCTTGTTTGGTGTCTTTTGTCTTGTTTGTTGTCATTTTTTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa5821
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Nonsense | 533 | 701 | 13 | 13 |
ENSDART00000101171 | Nonsense | 548 | 716 | 14 | 14 |
ENSDART00000134157 | Nonsense | 576 | 744 | 14 | 14 |
ENSDART00000138574 | Nonsense | 533 | 550 | 10 | 10 |
ENSDART00000089206 | Nonsense | 533 | 701 | 13 | 13 |
ENSDART00000101171 | Nonsense | 548 | 716 | 14 | 14 |
ENSDART00000134157 | Nonsense | 576 | 744 | 14 | 14 |
ENSDART00000138574 | Nonsense | 533 | 550 | 10 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30751840)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29907786 |
GRCz11 | 9 | 29718532 |
KASP Assay ID:
554-3393.1 (used for ordering genotyping assays)
KASP Sequence:
GTGCCGATCTGCGAGGAGTCATTAACTACCAGGAGGTGGAAGAGTTAAAA[C/T]AATCCATTAAATGCTTRAGTGTGGTGCACTGGAACGGCCCGCAGAGCAAC
Long Flanking Sequence:
CTGAATGTTTATGTCCAGGTATGAGCAGTCAACATTACCAGGATGACACACATCTTCTTAGAGGTACAGCTTTGATTGACTGCAAAAACACGCGTGCACACATGTGCGGTGCACACAACACGCATACATTGTGCATGCAGATTGTTGTTCATGAATGACTGTGGTTGTTGTGTCTTCAGTGTGCGTTCGTCTTTAACCCTGCATCACTTTTTTCAGTTGTGAGCCCATCTGTTATTTGGTTATTCCACTTTCATTCCTTCTGCCTTTCTTTCTTTGTCTGTCGCGCAGCTTACATAGAGGACGTGTCCCGCTGCGTAGACATGAGTAAACGGCTGATCATCGTTCTGACCCCGAGCTACGTGCTGCGTCGCGGATGGAGTATATTTGAGCTGGAGTCCCGTCTGCGCAACTCTCTGGTTTCAGGGGACATTAAAGTGATCTTAATTGAGTGTGCCGATCTGCGAGGAGTCATTAACTACCAGGAGGTGGAAGAGTTAAAA[C/T]AATCCATTAAATGCTTGAGTGTGGTGCACTGGAACGGCCCGCAGAGCAACAAGCCCGGCTCTCGCTTCTGGAAGCAGCTCCGCTACACCATGCCCTACCGCCGTCCACAGCAAACCATCACCAACCATGCGCTGGACACCAGTGAACCCGGCCCCTTTGCTGACCTGCAGACCGTCTCCGCTATCTCAATGGCCACGGCTACATCCGCCGCCTTGGCACCGGCTCACCCGGAGCTGCGCCCATCCCTGCGGAGCTCATACCGCTCGCATTCGCTGGCCAGGCAGAAACACTCGCACTACCGCAGCTACGACTACGAGCTGCCCTTCACGGCCGGAGGCACACTGCCACCCCAGCACACCTACTGCAACCTGCCCCTCACTCTCCTGAACGGCCAGCGGCCCGTCAACAACAAGACCCTGCGCCAGCACAGCCTGGACGAGCACCACGGCAACAACGCCATGCTCCCGCTGCTGCCCCGAGAGACCAGCATCTCCAGCGTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2524
Status:
F2 line generated
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Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000089206 | Nonsense | 533 | 701 | 13 | 13 |
ENSDART00000101171 | Nonsense | 548 | 716 | 14 | 14 |
ENSDART00000134157 | Nonsense | 576 | 744 | 14 | 14 |
ENSDART00000138574 | Nonsense | 533 | 550 | 10 | 10 |
ENSDART00000089206 | Nonsense | 533 | 701 | 13 | 13 |
ENSDART00000101171 | Nonsense | 548 | 716 | 14 | 14 |
ENSDART00000134157 | Nonsense | 576 | 744 | 14 | 14 |
ENSDART00000138574 | Nonsense | 533 | 550 | 10 | 10 |
Genomic Location (Zv9):
Chromosome 9 (position 30751840)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 9 | 29907786 |
GRCz11 | 9 | 29718532 |
KASP Assay ID:
554-3393.1 (used for ordering genotyping assays)
KASP Sequence:
GTGCCGATCTGCGAGGAGTCATTAACTACCAGGAGGTGGAAGAGTTAAAA[C/T]AATCCATTAAATGCTTRAGTGTGGTGCACTGGAACGGCCCGCAGAGCAAC
Long Flanking Sequence:
CTGAATGTTTATGTCCAGGTATGAGCAGTCAACATTACCAGGATGACACACATCTTCTTAGAGGTACAGCTTTGATTGACTGCAAAAACACGCGTGCACACATGTGCGGTGCACACAACACGCATACATTGTGCATGCAGATTGTTGTTCATGAATGACTGTGGTTGTTGTGTCTTCAGTGTGCGTTCGTCTTTAACCCTGCATCACTTTTTTCAGTTGTGAGCCCATCTGTTATTTGGTTATTCCACTTTCATTCCTTCTGCCTTTCTTTCTTTGTCTGTCGCGCAGCTTACATAGAGGACGTGTCCCGCTGCGTAGACATGAGTAAACGGCTGATCATCGTTCTGACCCCGAGCTACGTGCTGCGTCGCGGATGGAGTATATTTGAGCTGGAGTCCCGTCTGCGCAACTCTCTGGTTTCAGGGGACATTAAAGTGATCTTAATTGAGTGTGCCGATCTGCGAGGAGTCATTAACTACCAGGAGGTGGAAGAGTTAAAA[C/T]AATCCATTAAATGCTTGAGTGTGGTGCACTGGAACGGCCCGCAGAGCAACAAGCCCGGCTCTCGCTTCTGGAAGCAGCTCCGCTACACCATGCCCTACCGCCGTCCACAGCAAACCATCACCAACCATGCGCTGGACACCAGTGAACCCGGCCCCTTTGCTGACCTGCAGACCGTCTCCGCTATCTCAATGGCCACGGCTACATCCGCCGCCTTGGCACCGGCTCACCCGGAGCTGCGCCCATCCCTGCGGAGCTCATACCGCTCGCATTCGCTGGCCAGGCAGAAACACTCGCACTACCGCAGCTACGACTACGAGCTGCCCTTCACGGCCGGAGGCACACTGCCACCCCAGCACACCTACTGCAACCTGCCCCTCACTCTCCTGAACGGCCAGCGGCCCGTCAACAACAAGACCCTGCGCCAGCACAGCCTGGACGAGCACCACGGCAACAACGCCATGCTCCCGCTGCTGCCCCGAGAGACCAGCATCTCCAGCGTC
Associated Phenotype:
Not determined