Busch Lab

ZMP

kcnt1

Ensembl ID:
ENSDARG00000079484
Human Orthologue:
KCNT1
Human Description:
potassium channel, subfamily T, member 1 [Source:HGNC Symbol;Acc:18865]
Mouse Orthologue:
Kcnt1
Mouse Description:
potassium channel, subfamily T, member 1 Gene [Source:MGI Symbol;Acc:MGI:1924627]

Alleles

There are 6 alleles of this gene:

Allele Name Consequence Status Availability
sa23851 Nonsense Available for shipment Available now
sa12911 Nonsense Available for shipment Available now
sa29503 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa43577 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa23851
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113556 Nonsense 397 1020 11 24
Genomic Location (Zv9):
Chromosome 21 (position 5139164)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 4735308
GRCz11 21 4899873
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTATGATTGGTGTGAAGAGAGAAGATAATAAGAGCATCTTGTTGAACCCT[G/T]GACCGCGACACATCATGTCTGCCAGCGACACCTGTTACTACATCAACATC
Long Flanking Sequence:
TTGAACTGGGCATTTTTATTCGATGTTCAGTGTAATTTAAACTGAAACATGAAGAGAGGGCGGGAAATAGAGTAGCTCCTCCCACTTAAAAAAAACAGCCAGTAGCGTTTTATTTCATCACAGCTCTGCCAGTGAGAGTGGTTGAGCTTAAGTCCATCAAATGGAATGAAATCAAATGTAAGCAAATGAGAAGCGTCTTAAAGGGGGCGGGACACGTCAGATAGGTTTGAAAAGAAAGGATTGATGTAAAAAAAATAGTTGATCAGGCGGAAGTGGCAAACTGCAAGCTTTACATGTTTTTTATGTTTATATCAGTTTTGAATATCCTTAAAACTGATAGTATTTTTACTACTAACATCTTTAAAAAAAACTTTATTTTAATTTCAACAGGAGCTTTATATCCAATTTGGAAAATGTGTAAGAACTCTGTTGTGTTTAGGTACGGTGTGTGTATGATTGGTGTGAAGAGAGAAGATAATAAGAGCATCTTGTTGAACCCT[G/T]GACCGCGACACATCATGTCTGCCAGCGACACCTGTTACTACATCAACATCACGAAAGAGGAAAACTCCGCCTTCATCTTCAGACAGGAGGAAGACCAGGGAAAGGGGCGGAGCCACTGCGACTTTTTAAACAGCCCGTCAGGACTACCTGTTCATAGCATTATTGCTAGCATGGGTAAGAGAGAATGGAGAGAAGATACACATGAAGTGGTTTTGGTGGGTGGTTAAAATGCCATTAAGTTTTTCCATTGGGAAGATCTTCGATGGAAAACTTAATGATATATCTGTTGTGAGCTCTGAAGGTCATTATTTATTCATGCGGCATGGTAGCTCAGTGGTTAGCACTGTTGCCTCACAGCAAGAAGATCACTGATTCAAGTCCCGGCTGGGTCAGTTGGCATTTCTGTGTGGTGTTTGCATGTTCTCCCCGTGTTGATGTGGGTTTCATGCAGGTGCTCCGGTTTCCCCCCACAGTCCAAAGACATGCGCTATAGGTGAATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12911
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113556 Nonsense 555 1020 13 24
Genomic Location (Zv9):
Chromosome 21 (position 5132927)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 4729071
GRCz11 21 4893636
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGCTCTCCRACCCTTTGCCATCTTTTACCTCAGAAAGCYCCTTTCTGCTG[T/A]TTACGGCTTGACCAGGTRAGCAGTGWTCCTCAAGACATCTAAATATTATA
Long Flanking Sequence:
TAGCTAGGTAGGTGGCAGGCTGCAGATAGGTAGCTAAGTGGCAGGCAGGGGCGGGAACTGCTTACCTTGGTTCTGGCCGGCGCGAGTTCCCTCCTAACACTTCCCGCCCGTCACAGCGTCTAACAAAGGGGCGGGGTGCGTGGTGACGTCACCGGCACCCCCGCCCCTTTGTTTACACGGTGGGTGGGGAATGCCGGTGACCGCTGTGTACGGATAGAATCAGCGGAGCGGGGAGCGCTCTCTCTCCCCGCTCCGCTGATTCTGTCAGTGTACAGCGGTCGGCGTGGGCCACAAAATATTGCACTGAGGGCCGCAAATGGCCCGCGGGCCGCGAGTTTGAGACCCCTGATTTAGTGTATGGTTAATGCCTGTTTAAGGGTTAACATGTATTTTAATGTTGTTTTCCTCAGTTTTGTGAAAGGTTATCCCCCGAACTCTCCATATATTGGGAGCTCTCCAACCCTTTGCCATCTTTTACCTCAGAAAGCCCCTTTCTGCTG[T/A]TTACGGCTTGACCAGGTGAGCAGTGATCCTCAAGACATCTAAATATTATACCTGCACAATATAATATGCACATTATATTGGACCATGCATTCATTTATTTTCCTTCGGCTTAGTCCCTTATATACCAGGGGTTGACATAGTGGAATGAACCGCCAACTATTCCAGCATATGTTTTACGCAGCGGATGCCCTTCCAGCTGCAACCCAGTACTGGGAAACACCCATACAAACTCTCCTCCACACAGACTCCTATGCCTAGTTCAATCTGCATGATTTTAGCCCCGATTTTGACTGGCCGACAGGTTTCGAGAAATCGCAGACAAATGCCTGAAATCACAGGCAAATCGGTGCTTGTGCAGGTGAGTGACCATCACACAGTATGAACTATCAATGATCTGAGAGCATCCCAGATGAGCCGCCGATGCCTGTGAGATATTTGGCATGCTAAATATCTGGAGCTGTCGGCGATTCAAATCATGCTTTGTGAAATGAGTTTTGACT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa29503
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113556 Essential Splice Site 560 1020 13 24
Genomic Location (Zv9):
Chromosome 21 (position 5132911)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 4729055
GRCz11 21 4893620
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCATCTTTTACCTCAGAAAGCCCCTTTCTGCTGTTTACGGCTTGACCAG[G/A]TGAGCAGTGATCCTCAAGACATCTAAATATTATACCTGCACAATATAATA
Long Flanking Sequence:
AGGCTGCAGATAGGTAGCTAAGTGGCAGGCAGGGGCGGGAACTGCTTACCTTGGTTCTGGCCGGCGCGAGTTCCCTCCTAACACTTCCCGCCCGTCACAGCGTCTAACAAAGGGGCGGGGTGCGTGGTGACGTCACCGGCACCCCCGCCCCTTTGTTTACACGGTGGGTGGGGAATGCCGGTGACCGCTGTGTACGGATAGAATCAGCGGAGCGGGGAGCGCTCTCTCTCCCCGCTCCGCTGATTCTGTCAGTGTACAGCGGTCGGCGTGGGCCACAAAATATTGCACTGAGGGCCGCAAATGGCCCGCGGGCCGCGAGTTTGAGACCCCTGATTTAGTGTATGGTTAATGCCTGTTTAAGGGTTAACATGTATTTTAATGTTGTTTTCCTCAGTTTTGTGAAAGGTTATCCCCCGAACTCTCCATATATTGGGAGCTCTCCAACCCTTTGCCATCTTTTACCTCAGAAAGCCCCTTTCTGCTGTTTACGGCTTGACCAG[G/A]TGAGCAGTGATCCTCAAGACATCTAAATATTATACCTGCACAATATAATATGCACATTATATTGGACCATGCATTCATTTATTTTCCTTCGGCTTAGTCCCTTATATACCAGGGGTTGACATAGTGGAATGAACCGCCAACTATTCCAGCATATGTTTTACGCAGCGGATGCCCTTCCAGCTGCAACCCAGTACTGGGAAACACCCATACAAACTCTCCTCCACACAGACTCCTATGCCTAGTTCAATCTGCATGATTTTAGCCCCGATTTTGACTGGCCGACAGGTTTCGAGAAATCGCAGACAAATGCCTGAAATCACAGGCAAATCGGTGCTTGTGCAGGTGAGTGACCATCACACAGTATGAACTATCAATGATCTGAGAGCATCCCAGATGAGCCGCCGATGCCTGTGAGATATTTGGCATGCTAAATATCTGGAGCTGTCGGCGATTCAAATCATGCTTTGTGAAATGAGTTTTGACTGAAAATAACTTCGCCG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa43577
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000113556 Essential Splice Site 772 1020 18 24
Genomic Location (Zv9):
Chromosome 21 (position 5127351)
Other Location(s):
Assembly Chromosome Position
GRCz10 21 4723495
GRCz11 21 4888060
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTGCTGGCCGAGTCTTCAGTATCAGCATGCTGGACACACTCCTGTACCAG[G/A]TAAATGCGTGTCTTTAAAGGTGCAGTATGTAGGATTAACATCTAGGTATT
Long Flanking Sequence:
AAAACAAGTAGTGCAATATGATTTGTCGTACACTTATAGGTAGACATTGTTTGTCTTATTCAGTCCTTGTAAGATGGAGTGTAAGTGTTATGAACTCATAATTCATTGTACTTGAATGCAATGTAAGTCCCTTTGGATAATGCTGTCTGCCAAATGCACACATGTAAATAATATTGCAATACTCTGGTTTACCGTTTCTCCAGGTTGTTTCCGAGTCTCAGTATAATCACAGAACTGACTCACCCGTCCAACATGAGATTCATGCAGTTCAGAGCGAAGGACTGCTACTCGCTCGCCCTGTCCAAACTAGAGAAGGTGAGACAAAAATGTTTGCATATGCTGATTGAAAAATGTAGTTTTGTAATTGGAATATTGCCAAATGTGTGTTCGATCAACAGAAGGAACGTGACAAAGGCTCAAATCTGGCCTTCATGTTTCGCCTTCCCTTTGCTGCTGGCCGAGTCTTCAGTATCAGCATGCTGGACACACTCCTGTACCAG[G/A]TAAATGCGTGTCTTTAAAGGTGCAGTATGTAGGATTAACATCTAGGTATTGCAGTACAAATTCAAAATATTGGACAGGGTTTTTTATTCGCCCAGTGTCAGGGTTCTGCCACTCTGGTCTTGTAAATTCTTGTTTTGGTGGCAGAGTCCAGACACTAGCTCTGTCTAGTCACTTGTTTTGTCGTGTGTGTGTGTGTCTCTGTATGAGCGTCATTTGTGAACGCGCATGGACCCGCTTGATGTGGACGCGTGAGGCCTTTGCGTGTTTGCAGGTGCGCTCTCTCGTCCGGGTGTTCACGTTAGTCTGTCTGCAGCGTGGTGTTTTATTCCCAGCGTCTCAGTCCAGTTGGTTTCGGTTTCTGTCGGCGCTGGGATGAAACATGCACGCTGTGTGTGTGAGTGCACGATGAGTGCTTTCATTCATCGTGTACTCGTGTCTTGCGATCAGTCTTCTATTGGTGTTGTGTTTAGCACGTGGTGTATGTTGTCATGTACATGCAG
Associated Phenotype:
Not determined