Busch Lab

ZMP

si:dkey-162b3.1

Ensembl ID:
ENSDARG00000003829
ZFIN ID:
ZDB-GENE-041111-110
Description:
polypeptide N-acetylgalactosaminyltransferase 2 [Source:RefSeq peptide;Acc:NP_001121823]
Human Orthologue:
GALNT2
Human Description:
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) [Sour
Mouse Orthologue:
Galnt2
Mouse Description:
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 Gene [Source:MGI

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa24933 Nonsense Mutation detected in F1 DNA Not yet available
sa17374 Nonsense Available for shipment Available now
sa14540 Essential Splice Site Available for shipment Available now
sa12860 Nonsense Available for shipment Available now
sa28108 Essential Splice Site, Missense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa24933
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000021360 Nonsense 21 565 1 16
ENSDART00000136217 Nonsense 21 559 1 16
Genomic Location (Zv9):
Chromosome 13 (position 24442455)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 24088115
GRCz11 13 24218565
KASP Assay ID:
554-7488.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTAGGATGTATCTATGTTTCGCTGTGCTTTGGGTTCTGGGCATAGCTTA[T/G]TATTTCTATTCGGGAACAACGCTGAGTCGAAAGGTAGGTTTTTCTGTTTT
Long Flanking Sequence:
CGAGAGAAGGCTGGGTTACAAGATGAGCAGATAAAAAAAATATGCAACAGTGGAAAAAAGCAATCGTATTTTATGACTTTCGAGAGAAAGCGTCAGACCATAATACTATGTTTGTGAAATTTTCTCCAACATGCGCCAAACATTGATTCCTCGGCGCATCTTGAGGAGGTTCAGGCTAACGATGGATGTCTCCACCCCCGGCCCGCCTCCGTGCGCTTCTCTGCGGAGCGTGATTGGATTAAAGTCGGTTACCCTTTCCCCTCTAACCCGGTGATGCTGGCTGTTTCCTGCTTCTTCCTCTAGCCAACCGCTGCTGCTGCTGAAGCCTTGTTAGTTGAGCGCTGTGGCCACAGCGAGACGCAGAACGTGGACGTCAGTGGCTTTTCAAGGCACAAACCTCGAGCGAGCCACTGTATCACCGCATCAAAAAACACGGCAATGCGCAGGAAATCTAGGATGTATCTATGTTTCGCTGTGCTTTGGGTTCTGGGCATAGCTTA[T/G]TATTTCTATTCGGGAACAACGCTGAGTCGAAAGGTAGGTTTTTCTGTTTTCTGCTTTCTTCATGTTGAATGCCGCTGGAGTGGTGCGAATTTAAGTTGTTTGTGGCGATTGTATTGAAATGTTTCGTGTGTGTGTGGATGTGGAAAAACAGTCGGCATGACGGTAGAGAGTCCGCACGTTTAAATAGCCAAAGTCTGTAGACTGGGCTCACAAAGATAGTGTTATCGCTCCGTGCTGTGATTTCTCTGCCAGCCAGGCTATCAAAGAACCATGTTTTGCTTAACTGCATTCACACAATATCACGAGTCTTTCTATTAAAATGAGTTTTTTTCCCTTGCCGATTAAATTTAGGATCGAAAGCGACGATGACCGGTTAAAAATGAGCTGTTTAAATAGTAAACGACACTGTAGTTGTAAACCATTCATTAAACATGTTTGATATGAATTGTAAACATCTGCAATGTTACAGGGAAGCAGTAAAAAAACTAACGTTAGCGTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17374
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000021360 Nonsense 35 565 2 16
ENSDART00000136217 Nonsense 35 559 2 16
Genomic Location (Zv9):
Chromosome 13 (position 24363923)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 24009583
GRCz11 13 24140033
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAAATGCCTTTTMTGCTCACAATCTGTTCTCCTCTTTGGCAGGATGACTG[G/A]AGTGGCATTAATTCAAACCGAATTCAAACACACAGYAATGCAGATGACAA
Long Flanking Sequence:
ACACTTCTGTTCAATCCTGAGAAAATCTATTTAGTTCTTTTGAATTATAGCTGTCAGTTGATCTGCTACAATTTCTTCCTACTAAAATAAAATGCTTATGATATGATCAAACTCACTGAGAGGAAAAAGATACACAGCAATGCACAAACTCCTGATCTGTGGTTACTACAGCAACTAGACTTTTATAAATAACATTAGACTTAATTCAATGGAGAATAAATTACGTTTGAAGTAATTGTGCATTTTTAGGTTTGGACTTCATTGTTTTTGGCTAAAAGCTGTTATTCTTTCTGCCTTGAAATCTGCATGAAGAAAAATGTCAGATTAAGAGTACTGTTAGTGTGAATATGTGGTGTCAAAGGCAGTGCTTGCAGCCCTCAACGGCCGTAACCACTTTCTCAATACCAGTTACTGTTTAATTTGTTTTTCGATTACCATTCTAACCCTTACCAAATGCCTTTTATGCTCACAATCTGTTCTCCTCTTTGGCAGGATGACTG[G/A]AGTGGCATTAATTCAAACCGAATTCAAACACACAGCAATGCAGATGACAAAGACCACAGCCTTGAAAGTCTTCCTCTAGGTAAGAGCCAACCTGACATCTCATGTGCATAATCGTGTCAGGATTATCCCGCACTCATAATTCAACTTTTCCCTGCTTCTATCCCAAATGAATAATGGAGTGTTTCTTCTCAGGTATGGGCTTTAATGAACAGCCCGCACGAAACAAGGCATATTTTTTTATTCCCTTCATAAACAGGACTTAACCTGAGGTTATCTGTGGAAGCAGGTGTAGAAAGTCTTACTTGAGGGCTCCTGAAATGCATGAGAGTAATTTAAGAGTGGCTGTGTTACGGGCCCTAAGACAAGAGCTCTGTTTCTTCGCTCTTTATTCCCCTTTTTGTAAATGTATTCCAACTAAACTTGGCTGCTTAATACATTATGATAATAACATATGCTTTTTATAGACTTGCTGCATTTTAAAGTAGTATTATAGTAGGTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa14540
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000021360 Essential Splice Site 290 565 9 16
ENSDART00000136217 Essential Splice Site 290 559 9 16
Genomic Location (Zv9):
Chromosome 13 (position 24310815)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23956475
GRCz11 13 24086925
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCTGGAACAAAGACRAGCTCGACAAGGAAACCCCATYGCTCCTATCAAG[T/A]AAGAAAGCAATCGTGAAWCTGCTGATGTGTAATTGTCAGCYGCTTTGSGA
Long Flanking Sequence:
CTCAATTGGTTCCAAACCTTGCTGAACCTAAAAAAAGCGATATATTTTGTAGAAAGCTGGAAACAAGTAATCTTTGACTTCCAAAACATTTTAGTCTTCTGAATATTTAAATTGTTGTTCAACAGAAGACAGAAACCCATGTAGGTTTGTGACAAGTAAATTTTACATTTAAGTAAATGATGACAGAATTTTCAGGTTTTGATGAACTATCCCTTTAAAGTATATGCTATTGTGTGATTCTGAACAAATGTTCATTCTTTTTTCATTAATGAATTTGTAATATAACTAATCTGCCTCTTTATCCTCCCACCTGACACATGGCTGAACATGGCAATGAGCCTACTTTTACTGTAACATCACTTGAGCTTTCAGAACTTGATCCCTAAAGTAATGTGTCTAATCTTTATCCAGGTTTTGATTGGAATCTGGTTTTTAAATGGGACTACATGACCCTGGAACAAAGACGAGCTCGACAAGGAAACCCCATCGCTCCTATCAAG[T/A]AAGAAAGCAATCGTGAATCTGCTGATGTGTAATTGTCAGCTGCTTTGCGATTTTATTACTATTATTCTAGGGATTTTTTTTTCTCATTCTATATTGGCTGTTTAATGTATTGACTCTTTTGAAGTCTAACTCCAGCTGTTGGTGCTCAGTATAGTTTTGATTTACAAAGACTTTGTACTTTTGAAGACTGAGTAAAATACTTTTACCTACTGCTGCTGATGATGTCATTGCTATGTATGCATTGCATACTGAACTGTGATTGGTTTTCAGACCTAAGTGGTCATGTCTATAACACTTATATTTTATATATTTCTTTTACATATTTAGGCAACTCCATTTTTAGTGCTGGTAATAATCTGAAAATGCGAATCTAGATGCATCAAATTTTCATGTAAAAATGCTATCAGATTTTGAACAAAAGGGAAAAAAGCTCAAATAAATAAATAAATAAATAAAATGTTTTAAATATTAAAATATTTCAATATAAAAAAATTGTTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12860
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000021360 Nonsense 440 565 14 16
ENSDART00000136217 Nonsense 440 559 14 16
Genomic Location (Zv9):
Chromosome 13 (position 24298155)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23943815
GRCz11 13 24074265
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTWGTTTAGAGTGCCGGAWCATCAGGACATTGCATTTGGAGCTCTTCAG[C/T]AGGGTCAAAACTGTCTGGACACACTGGGCCATTTTGCAGATGGTGTGGTG
Long Flanking Sequence:
GAAAAGTACTCAAAAGCCTACTTTTTTCCTTTCTTTATATTTTTTTATTTTTTTATAAAGCTGTCAGGTGAAAAAGTAAAGCTGCTGCTCTTTATTTGCTTTTCTGTACTCTTCTTTCACATTCATTTAAACCCTGAATTAAACACCAGGCATGAGCAAGAATGTTTTGCTCATCTACTTATGATTATTATCCAATTGCATCTTAAAGCCAGCTGTAAACATGAGCTTTGATAGCCTTAAAAGAATTGAAAATTGCAAGTTTTTTTATAAACTATCCCTTAAACTGTGTAAGCTGGGCCTCTTTTTAATTGATGTTTAACTATGCAAATTAAGGAAAATTAATAGAATGAAATTCAATGTTTTTTAGTCTTAAAGCTTTCTTTTCACTACTGGAAACTACAGTCTCAAATACTTCAGCAGTGTAATCATACCTATCCTCGTGCTTGTGTCTGTTGTTTAGAGTGCCGGATCATCAGGACATTGCATTTGGAGCTCTTCAG[C/T]AGGGTCAAAACTGTCTGGACACACTGGGCCATTTTGCAGATGGTGTGGTGGGGGTTTACGAGTGCCACAACGCTGGGGGCAATCAGGTATCAAACAAAACGCAGGTACTCAACAGTCTTCTAATGTCTGGTGCAGAGCACTGGGTGATGGACTGGCAGTGAGTCTGTGTTAGCTGTAAATCATAGACACGCTTGTGGAGGGTGAGTGAGTGGTGTATAGATGAGACACGCTAGTTTCTGGATCACTTTACATGGTTCTTGCTGTAGACATGTGTGCATGTCTAAAGGATTTAAAAGGGTCTGTGTTTTTCTGTTTCAATATGATGTGATATGAAGTAAATAATATAATACATTTACATTTAGTTTAAATATATATTTCTATACATTGTATTGCATTAAATGACTTTATAATAATATATTGATGACAATATAAATAAGTAATAACGTATACATTTTATAACTAGTTGTTTTACTAGTATTGATGTGAAAAGTGCAGTATAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa28108
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000021360 Missense 469 565 14 16
ENSDART00000136217 Essential Splice Site 468 559 None 16
Genomic Location (Zv9):
Chromosome 13 (position 24298067)
Other Location(s):
Assembly Chromosome Position
GRCz10 13 23943727
GRCz11 13 24074177
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATGGTGTGGTGGGGGTTTACGAGTGCCACAACGCTGGGGGCAATCAGG[T/A]ATCAAACAAAACGCAGGTACTCAACAGTCTTCTAATGTCTGGTGCAGAGC
Long Flanking Sequence:
TCTTTATTTGCTTTTCTGTACTCTTCTTTCACATTCATTTAAACCCTGAATTAAACACCAGGCATGAGCAAGAATGTTTTGCTCATCTACTTATGATTATTATCCAATTGCATCTTAAAGCCAGCTGTAAACATGAGCTTTGATAGCCTTAAAAGAATTGAAAATTGCAAGTTTTTTTATAAACTATCCCTTAAACTGTGTAAGCTGGGCCTCTTTTTAATTGATGTTTAACTATGCAAATTAAGGAAAATTAATAGAATGAAATTCAATGTTTTTTAGTCTTAAAGCTTTCTTTTCACTACTGGAAACTACAGTCTCAAATACTTCAGCAGTGTAATCATACCTATCCTCGTGCTTGTGTCTGTTGTTTAGAGTGCCGGATCATCAGGACATTGCATTTGGAGCTCTTCAGCAGGGTCAAAACTGTCTGGACACACTGGGCCATTTTGCAGATGGTGTGGTGGGGGTTTACGAGTGCCACAACGCTGGGGGCAATCAGG[T/A]ATCAAACAAAACGCAGGTACTCAACAGTCTTCTAATGTCTGGTGCAGAGCACTGGGTGATGGACTGGCAGTGAGTCTGTGTTAGCTGTAAATCATAGACACGCTTGTGGAGGGTGAGTGAGTGGTGTATAGATGAGACACGCTAGTTTCTGGATCACTTTACATGGTTCTTGCTGTAGACATGTGTGCATGTCTAAAGGATTTAAAAGGGTCTGTGTTTTTCTGTTTCAATATGATGTGATATGAAGTAAATAATATAATACATTTACATTTAGTTTAAATATATATTTCTATACATTGTATTGCATTAAATGACTTTATAATAATATATTGATGACAATATAAATAAGTAATAACGTATACATTTTATAACTAGTTGTTTTACTAGTATTGATGTGAAAAGTGCAGTATACATATTGAATTTGAATATATCCTTTCTATATATTGAATTGTATTTCATTATATTACTTTGTAATGACAAAGTGATGACATGATAATTAA
Associated Phenotype:
Not determined