Busch Lab

ZMP

lmod1

Ensembl ID:
ENSDARG00000056111
ZFIN ID:
ZDB-GENE-081104-348
Description:
Novel protein similar to mouse tropomodulin 1 (Tmod1) [Source:UniProtKB/TrEMBL;Acc:B0S7F1]
Human Orthologue:
LMOD1
Human Description:
leiomodin 1 (smooth muscle) [Source:HGNC Symbol;Acc:6647]
Mouse Orthologue:
Lmod1
Mouse Description:
leiomodin 1 (smooth muscle) Gene [Source:MGI Symbol;Acc:MGI:2135671]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa17930 Nonsense Available for shipment Available now
sa127 Nonsense Available for shipment Available now
sa41229 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa17930
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078545 Nonsense 141 645 2 3
ENSDART00000131348 Nonsense 141 641 2 2
Genomic Location (Zv9):
Chromosome 8 (position 29155004)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 28282922
GRCz11 8 28302061
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATT[T/A]ATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAAMAGGTGATAAGA
Long Flanking Sequence:
CCAGACCTGAATGTTCCTCCCTTTGCTGCCTTATAAGGGCACATCTGAGAGTTTTAAGACTTCTTCAAACAATAGCACACACATCTACACAGTACGTTCATTCCCTTTTAATGACCACCAAAAATAACTCACTCAGTTCAACTGGGTCCAGTCATGAAGACCTGTGTATTTAATGACAATCTTGATATTTATCTATAATTACACTAAAATGACAGCAAAAGTGAACTGAAATTAAATGTAAATACAATGTCAAAGATCAGACCTAGATTAGCCAAAATCAGATAAGCAAACTATCAAAAGACAAACAGTCAAGTACCTTTGTGAATAATGTGTCTGTTTGTAGGGAGGGGATGGAAGAAGGAGAGAGCGACTTCGCCGGATGAGGAGCAGAGAGTTTTCCAGATCACAGAGCGGCGATCCTCCGGACACAGAGAGCAGAAATGCTGAAAGTGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATT[T/A]ATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAACAGGTGATAAGATGGAAAGTGGCAAAGAACTTTCTAGGAAAGAGAAAGGTGGCAGCAAAACTCTAGACCTCATCTCCAAACTGCAAGAGAAACAAGAGGAGAAGAAAGACAGAGGGAGGAAGGATGACAAGAAAGTGAACGAAAACTCCAAAATACGAGGGGTTGTCTCCAAACTTCAGGGGAATAAAGTGACTGAGGAAAAAAAGGACAAAAAGACGGACGTCAAACAGCAAGATGGAAGCAGAACTAAAGCTTCAGAGGTACCCAAAAACAACAAAGCAGGACGAGTAAACTTAATAGATGCAGAAAAAGACGACAAAAACAGCAGATTTAGTACAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAACAAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTCCATGAAAGCTCAGGGAACTGTCATG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa127
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078545 Nonsense 283 645 2 3
ENSDART00000131348 Nonsense 283 641 2 2
Genomic Location (Zv9):
Chromosome 8 (position 29154579)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 28282497
GRCz11 8 28301636
KASP Assay ID:
554-0180.1 (used for ordering genotyping assays)
KASP Sequence:
CAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAA[C/T]AAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTC
Long Flanking Sequence:
ACACAGAGAGCAGAAATGCTGAAAGTGAAAAAGATAAGGAGAGAACGAGAAAATGGGAGGATGACTCTAAAGATTTATCTGATGAGGGAAAGAATAAACGGGAGGAAAAGAGAACAGGTGATAAGATGGAAAGTGGCAAAGAACTTTCTAGGAAAGAGAAAGGTGGCAGCAAAACTCTAGACCTCATCTCCAAACTGCAAGAGAAACAAGAGGAGAAGAAAGACAGAGGGAGGAAGGATGACAAGAAAGTGAACGAAAACTCCAAAATACGAGGGGTTGTCTCCAAACTTCAGGGGAATAAAGTGACTGAGGAAAAAAAGGACAAAAAGACGGACGTCAAACAGCAAGATGGAAGCAGAACTAAAGCTTCAGAGGTACCCAAAAACAACAAAGCAGGACGAGTAAACTTAATAGATGCAGAAAAAGACGACAAAAACAGCAGATTTAGTACAGTTGAAGAAACAAGTTTGGATAAAACCAGACCTCAAAAGGAGAGAGAA[C/T]AAGTGAAAGCACCAGAAAACAGCAAGGCCAAGATTTTTACCAGTTCTTTCCATGAAAGCTCAGGGAACTGTCATGGAGCGGACACCTGTTCACTTACTACTGAGGAGGATGAGTCTTATAGTGAAGATCTGGACAGTGACACTGGCTCCAGCATGTTTGACGATCTTCTAGAGCAGGTTCGCAGTGACGATCCTGAACTAACTGAGGTCAACGTCAACAATTCAGATGCCATTAAAACAGATACCCTGATTCAGTTTGCAGAGGGTCTTCGCAGTAACACTCACATCAAAACCTTCTGCCTTGCAAACACAAGAGCGGATGATCATGTCGCATTCGCCATCGCTAAAACATTGCGAGAAAACTCAACCCTGACCGGCATCAACCTCGACTCTAATCATCTGACAGGCAAGGGCATCCTGGCCATCATCAACTCTCTTCAACACAACAGCGCACTGATGGAGCTGAGGTTTCATAACCAGAGACACATCTGCGGAGGGAAG
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa41229
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000078545 Nonsense 503 645 2 3
ENSDART00000131348 Nonsense 503 641 2 2
Genomic Location (Zv9):
Chromosome 8 (position 29153919)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 28281837
GRCz11 8 28300976
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAACATGGACAGGAAACGGCAGCAGCGATTAGAAGCGCAAAAACTCGCC[G/T]GACATGAGATCAACTCCACTGCACGTGAAGAAAATAAGAGCTCAACTAAT
Long Flanking Sequence:
ACGATCTTCTAGAGCAGGTTCGCAGTGACGATCCTGAACTAACTGAGGTCAACGTCAACAATTCAGATGCCATTAAAACAGATACCCTGATTCAGTTTGCAGAGGGTCTTCGCAGTAACACTCACATCAAAACCTTCTGCCTTGCAAACACAAGAGCGGATGATCATGTCGCATTCGCCATCGCTAAAACATTGCGAGAAAACTCAACCCTGACCGGCATCAACCTCGACTCTAATCATCTGACAGGCAAGGGCATCCTGGCCATCATCAACTCTCTTCAACACAACAGCGCACTGATGGAGCTGAGGTTTCATAACCAGAGACACATCTGCGGAGGGAAGACTGAGATGGAGATGGCCAAAGTCTTACGTGACAACTCTTCCCTGCTGAAGTTGGGATATCACTTTGAGTTAGCCGGGCCGAGGATGGCCATGACAAACATCTTGAGCCGAAACATGGACAGGAAACGGCAGCAGCGATTAGAAGCGCAAAAACTCGCC[G/T]GACATGAGATCAACTCCACTGCACGTGAAGAAAATAAGAGCTCAACTAATAAAGCTAACTCAAAAACATTGTCCACTCCAAAGAAAGACTCTAAATTTGCTTCCCTATCAAAATTCACCTCTGCTCAAGAAAATTCCAAAGCTTCGCCGACAAAGCCACTGTCTAAACTCCTCACCACTGAGGTAACAGGAAGCAAAAAAGGTGCAACAGGATGTGGGCAAGCCCCTCCTCCTCCTCCCCCTCCTCCAGGTCCAGCATTAGATGTTCAGGCACTAAGGAGGTCTTTGACCCCAGTCTCTCAGAGGAAACCAGATGGCAGTACAGCTGTCCGACAGACAGACAGGAGCTCCAGAGATCAGCTCCTGGACTCTATCAGAAACTGCAGCATGAATGCTCTCAAGAAGGCAAGTGATGTGAATCTCACGTTATAGATGTTGCTGCACATCCCACTCCTAATAAGAACAAAGAAAAAATCTAGAGCATTATGTTATTAAATGTCT
Associated Phenotype:
Not determined