ZMP
rnaseh1
Ensembl ID:
ZFIN ID:
Description:
ribonuclease H1 [Source:RefSeq peptide;Acc:NP_001002659]
Human Orthologue:
RNASEH1
Human Description:
ribonuclease H1 [Source:HGNC Symbol;Acc:18466]
Mouse Orthologue:
Rnaseh1
Mouse Description:
ribonuclease H1 Gene [Source:MGI Symbol;Acc:MGI:1335073]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa9127 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa12698 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa9127
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062441 | None | None | 276 | 1 | 8 |
| ENSDART00000148242 | Essential Splice Site | None | 160 | None | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 30404798)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 30476011 |
| GRCz11 | 20 | 30378890 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AATAACGCAAGAAGAAGCAGTCGTTTGTCAGCTGACCGCTAGCTTAGAGG[T/C]AGGAGGTGCACACATGTTTCAGAAACTCATATCMACTAAATCCATTACGT
Long Flanking Sequence:
TTACTTAGTCTGTGGTCTAGAAACAGAAAGCTGTTAAACCTCTTAAATGTATGCTTTTAATATTGTGGTTTAATATGTATTTCACTGATAATTGACTAGAAATAAAAATACTGCTCGTTTACCTTGGACTGCATTGTTTGACTCACTAAAATCGGTTCAATCGAGTCATTTATTTCGAACAACGAAACAATCAAACAAAGCCGTTTGTTTGTTTCCCTAAAAAGAGTCGGCTCTTAAGAGTCATATCTTAGTGAATCGATCTGTACTGTATGTTTTCGAATCCCTAAATAGCGGTTTTGTCTTTAGACCACATATTTATATATGGTCTATTACGCCTCTGCTCTGCTAATTAATGACTTAAATATAATGAGATTTAAAAGCTGTTTTTATTGTGTTATCTCAGGGTCTACTCCACTTCAGTTGGTGGCGCAAATGCTCCAAGAAAAAAGCAATAACGCAAGAAGAAGCAGTCGTTTGTCAGCTGACCGCTAGCTTAGAGG[T/C]AGGAGGTGCACACATGTTTCAGAAACTCATATCAACTAAATCCATTACGTTTCTGTCAGGTTGATATTATAATGGCTGACATGAAATCCCACGTAAAATGGATGCTATAATGTTTTCTCTGCGCTGAGCAAGAGACCAAGTTATGCTGAGATTGCCTGGCTTTTTGAATGTCGTACGCAGAACTCTATGCAACGCCGCAGAAGAGATGGGCAAGAAGGGAAACTTTTTCTACGCTGTGAGGAAAGGATTTAAACCCGGAGTGTATCAGACATGGTGAGCCTTAAGCTGTGTAGCCATATGCTCTATTTACTAGTATTATTGACGCGTGTTGCATTGCGTGACTATATATCGCATGTTTATTACAGGGAGGAATGTAAACATCAAGTGGATAAATTCCCTTCTGCAAGTTTTAAGAAGTTTGCCTCCGAACAGGATGCTTTGGACTTTGTGAGGAGCCATTCCGATGCATCATCCTCTGCGGGAGCAAATGGTAATATCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12698
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062441 | Nonsense | 20 | 276 | 1 | 8 |
| ENSDART00000148242 | Nonsense | 20 | 160 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 20 (position 30405063)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 30476276 |
| GRCz11 | 20 | 30379155 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGGGAAACTTTTTCTACGCTGTGARRAAAGGATTTAAACCCGGAGWGTA[T/G]CARACATGGTGAGCCTTAAGCTGTGTAGCYATATGCTCTATTTACTAGTA
Long Flanking Sequence:
CTGTATGTTTTCGAATCCCTAAATAGCGGTTTTGTCTTTAGACCACATATTTATATATGGTCTATTACGCCTCTGCTCTGCTAATTAATGACTTAAATATAATGAGATTTAAAAGCTGTTTTTATTGTGTTATCTCAGGGTCTACTCCACTTCAGTTGGTGGCGCAAATGCTCCAAGAAAAAAGCAATAACGCAAGAAGAAGCAGTCGTTTGTCAGCTGACCGCTAGCTTAGAGGTAGGAGGTGCACACATGTTTCAGAAACTCATATCAACTAAATCCATTACGTTTCTGTCAGGTTGATATTATAATGGCTGACATGAAATCCCACGTAAAATGGATGCTATAATGTTTTCTCTGCGCTGAGCAAGAGACCAAGTTATGCTGAGATTGCCTGGCTTTTTGAATGTCGTACGCAGAACTCTATGCAACGCCGCAGAAGAGATGGGCAAGAAGGGAAACTTTTTCTACGCTGTGAGGAAAGGATTTAAACCCGGAGTGTA[T/G]CAGACATGGTGAGCCTTAAGCTGTGTAGCCATATGCTCTATTTACTAGTATTATTGACGCGTGTTGCATTGCGTGACTATATATCGCATGTTTATTACAGGGAGGAATGTAAACATCAAGTGGATAAATTCCCTTCTGCAAGTTTTAAGAAGTTTGCCTCCGAACAGGATGCTTTGGACTTTGTGAGGAGCCATTCCGATGCATCATCCTCTGCGGGAGCAAATGGTAATATCAAGGCTGTTACTTTTCTTTTAATGACAGATTTACTATACTGAGACAGTTCATAAAAATACATTATAAGGTTTTTTAGGTGTATAAGAAGAAGAATCCAGAAGAGATGGGTGCGACCTACAATCCTTTTAGATAGCAAATGTGTCATATATCAGGAATATCTCATCACAAATATGTATCCACCCTCACAGATATTAAAGTGGCTCATTGTGCTTTATCAGATATGACCTTGTTGTAGTGTGTGAATGTAAAAGCTCTGCAACATTAAA
Associated Phenotype:
Not determined