ZMP
col10a1
Ensembl ID:
ZFIN IDs:
Description:
collagen, type X, alpha 1 [Source:RefSeq peptide;Acc:NP_001077296]
Human Orthologue:
COL10A1
Human Description:
collagen, type X, alpha 1 [Source:HGNC Symbol;Acc:2185]
Mouse Orthologue:
Col10a1
Mouse Description:
collagen, type X, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:88445]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa23026 | Nonsense | Available for shipment | Available now |
| sa23025 | Nonsense | Available for shipment | Available now |
| sa12685 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23026
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091021 | Nonsense | 384 | 655 | 3 | 3 |
| ENSDART00000123817 | None | None | 163 | None | 2 |
Genomic Location (Zv9):
Chromosome 17 (position 15384698)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 15535526 |
| GRCz11 | 17 | 15543459 |
KASP Assay ID:
2261-0795.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGGAGCCCAAGGCATTGAAGGCAAGCAAGGTTATCCAGGGGCAACAGGT[C/T]AGCCAGGTCCAAGGGGAGCAACAGGTGCTCCTGGAGCCAAAGGAGAGTTA
Long Flanking Sequence:
GTGAAGCAGGCAAATCAGGCTCACCTGGCCGTGATGGGGAATCTGGGCCCATGGGTCCACAAGGTCAAAAAGGTCAAACTGGGGCTCCTGGAGTTGGAATTCCCGGCAAACCAGGTGAAAATGGTGCTCCTGGTATGCCTGGCCCTACTGGTCCCAAAGGTCCACAAGGTGCATCTGGCGCTCCAGGTGCTCCTGGTGTACCTGGTTATGGAAAACCAGGTGAAAATGGTCTAAAAGGTGACAGAGGAGTACCTGGTAGTCCAGGAACAACTGGTCAGAAAGGTGAGCCAGGTGCTAAAGGGCACACTGGATATCCAGGTTCTCCTGGTGCTGTGGGTCCAGCTGGTCCTCAAGGTGCAAAGGGTTTCCCAGGTGAAAGGGGGCAAGCAGGTGATAAGGGTGAACCAGGTCCAATGGGACCACCAGGGCTAAAGGGGCACAAGGGAGAACAGGGAGCCCAAGGCATTGAAGGCAAGCAAGGTTATCCAGGGGCAACAGGT[C/T]AGCCAGGTCCAAGGGGAGCAACAGGTGCTCCTGGAGCCAAAGGAGAGTTAGGTCATACAGGTGCTACTGGTGCCCCTGGAACACCTGGATCTGTTGGACCAAAGGGTCATCCAGGGTACCCTGGAGCAACAGGTGAGAAAGGAGAACAAGGAGCTCCTGGAGCAAGAGGTCCTGTTGGCCCAGCAGGTCCTGGAGGCCCACCTGGCCTAAAAGGTCACCCTGGTATTCCTGGGGCACCTGGCCCTGCTGGTTTGGCTGCAAAAGGAATTCCTGGACCTCAGGGTCCACCTGGTCTTCCAGGATCTGAGGGACCTGCTGGAATTCCAGGTCCTTCTGGACCTCCCGGCCCACCTGGTCCTCCTGGTGAGGTCATCTTTGAGAAGGCTCAGGGTGAAACTGCATACCCAGTTCTTGTCAAAAGTCCAGTGTCTGCATTTACTGTTGCAACTGTGACACCTTATCCCCCATCTGGTACTCCAATTAAGTTTGACCAGGTTGTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23025
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091021 | Nonsense | 496 | 655 | 3 | 3 |
| ENSDART00000123817 | Nonsense | 86 | 163 | 1 | 2 |
The following genes are also affected by this mutation:
Genomic Location (Zv9):
Chromosome 17 (position 15384362)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 15535190 |
| GRCz11 | 17 | 15543123 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACCTGGTCTTCCAGGATCTGAGGGACCTGCTGGAATTCCAGGTCCTTCT[G/T]GACCTCCCGGCCCACCTGGTCCTCCTGGTGAGGTCATCTTTGAGAAGGCT
Long Flanking Sequence:
GTCCAGCTGGTCCTCAAGGTGCAAAGGGTTTCCCAGGTGAAAGGGGGCAAGCAGGTGATAAGGGTGAACCAGGTCCAATGGGACCACCAGGGCTAAAGGGGCACAAGGGAGAACAGGGAGCCCAAGGCATTGAAGGCAAGCAAGGTTATCCAGGGGCAACAGGTCAGCCAGGTCCAAGGGGAGCAACAGGTGCTCCTGGAGCCAAAGGAGAGTTAGGTCATACAGGTGCTACTGGTGCCCCTGGAACACCTGGATCTGTTGGACCAAAGGGTCATCCAGGGTACCCTGGAGCAACAGGTGAGAAAGGAGAACAAGGAGCTCCTGGAGCAAGAGGTCCTGTTGGCCCAGCAGGTCCTGGAGGCCCACCTGGCCTAAAAGGTCACCCTGGTATTCCTGGGGCACCTGGCCCTGCTGGTTTGGCTGCAAAAGGAATTCCTGGACCTCAGGGTCCACCTGGTCTTCCAGGATCTGAGGGACCTGCTGGAATTCCAGGTCCTTCT[G/T]GACCTCCCGGCCCACCTGGTCCTCCTGGTGAGGTCATCTTTGAGAAGGCTCAGGGTGAAACTGCATACCCAGTTCTTGTCAAAAGTCCAGTGTCTGCATTTACTGTTGCAACTGTGACACCTTATCCCCCATCTGGTACTCCAATTAAGTTTGACCAGGTTGTGTATAACGCAGAGCAGCATTATGATCCAGAGACAGGTATTTTCACCTGCCACATTCCAGGAATTTATTACTTCTCCTACAGCATGCATGTGAATGGAGCTAATGCTTTAGTGGCACTTTATAAAAATGGTGACCCAGTCATGTTCACTTATGATGAGTACAACAAGGGATTTGTGGACCAGATGTCCGGTAGTTCTGTACTTCAGCTCAATGAGCAGGACACAGTTTACATGCAGATCCCCGATGATGAGGCTAATGGTGTCTTTGCTGCCGATAATGTCCATTGCTCTTTCTCTGGATTCCTGATTGCCTCAACGTGATAAGGTGACCCATCCACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12685
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000091021 | Nonsense | 551 | 655 | 3 | 3 |
| ENSDART00000123817 | Nonsense | 141 | 163 | 1 | 2 |
Genomic Location (Zv9):
Chromosome 17 (position 15384195)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 17 | 15535023 |
| GRCz11 | 17 | 15542956 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACACCTTATCCCCCATCTGGTACTCCAATTAAGTTTGACCAGGTTGTGTA[T/G]AAYGCAGAGCAGCAYTATGATCCAGAGACAGGTATTTTCACCTGCCACAT
Long Flanking Sequence:
CCAGGTCCAAGGGGAGCAACAGGTGCTCCTGGAGCCAAAGGAGAGTTAGGTCATACAGGTGCTACTGGTGCCCCTGGAACACCTGGATCTGTTGGACCAAAGGGTCATCCAGGGTACCCTGGAGCAACAGGTGAGAAAGGAGAACAAGGAGCTCCTGGAGCAAGAGGTCCTGTTGGCCCAGCAGGTCCTGGAGGCCCACCTGGCCTAAAAGGTCACCCTGGTATTCCTGGGGCACCTGGCCCTGCTGGTTTGGCTGCAAAAGGAATTCCTGGACCTCAGGGTCCACCTGGTCTTCCAGGATCTGAGGGACCTGCTGGAATTCCAGGTCCTTCTGGACCTCCCGGCCCACCTGGTCCTCCTGGTGAGGTCATCTTTGAGAAGGCTCAGGGTGAAACTGCATACCCAGTTCTTGTCAAAAGTCCAGTGTCTGCATTTACTGTTGCAACTGTGACACCTTATCCCCCATCTGGTACTCCAATTAAGTTTGACCAGGTTGTGTA[T/G]AACGCAGAGCAGCATTATGATCCAGAGACAGGTATTTTCACCTGCCACATTCCAGGAATTTATTACTTCTCCTACAGCATGCATGTGAATGGAGCTAATGCTTTAGTGGCACTTTATAAAAATGGTGACCCAGTCATGTTCACTTATGATGAGTACAACAAGGGATTTGTGGACCAGATGTCCGGTAGTTCTGTACTTCAGCTCAATGAGCAGGACACAGTTTACATGCAGATCCCCGATGATGAGGCTAATGGTGTCTTTGCTGCCGATAATGTCCATTGCTCTTTCTCTGGATTCCTGATTGCCTCAACGTGATAAGGTGACCCATCCACATCACATCAAAACATCACTATTTCTCAAACAAAATTTCCTGTTCTGCAAACATGATGCACAACAGACTGTGCTATTGTTCTGAGAAATGCACGCATCTCAACTTGAAAATGCCAAGCAGTGGTGCCTAAAAGAAGGAAGTAATTTATGTAATGTTATCAGGGATAAAA
Associated Phenotype:
Not determined