ZMP
ncoa6
Ensembl ID:
ZFIN ID:
Description:
NcoA6 [Source:UniProtKB/TrEMBL;Acc:Q1L671]
Human Orthologue:
NCOA6
Human Description:
nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:15936]
Mouse Orthologue:
Ncoa6
Mouse Description:
nuclear receptor coactivator 6 Gene [Source:MGI Symbol;Acc:MGI:1929915]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa37597 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa12672 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa37597
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105284 | None | None | 1168 | None | 5 |
| ENSDART00000105286 | Nonsense | 362 | 1733 | 12 | 23 |
| ENSDART00000137641 | None | None | 154 | None | 4 |
| ENSDART00000147953 | Nonsense | 331 | 486 | 5 | 5 |
The following transcripts of ENSDARG00000071272 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 2724092)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 2770572 |
| GRCz11 | 23 | 2712248 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGGCTGGAGAAAAGCTCCACCACAGCCACAAATGGGGCAGCGTCCACCCT[C/A]GTTGGCGTCTGTCCAGACGCCCAATCATCCACCACCACCATACCCATTTG
Long Flanking Sequence:
ATTTGTCAGGATGTCCAAATAGTCAAAAGTAATGTTTTTTTAATCTGATTATCAGAGATGTAGTTTTTATTTCATGTTTTGAATGTTTTTACATTTTAATTTACATTTCTTTCCAGACACAATGGATCCCATGCTGTCAGGACTGGCCTTACAGCAACAGCAACAACAGCTCCAGCATCCTCAAGTGGGACATGGTCCACTCGGCAACTTGGGCCCGCAGGGACATCACATGCAAGCCATGCAGGCAAACCGGCAGTTGAATCCAGCAGTGCTACAGCAACTTCAGCAACAACAACAGCAGCAGCACCAACAGCAGCAGGTTCAGCTGGCTCAATTAGGCGGTGCACGTGGGCCTTTCAACCCCACCAACCAGATGCCTGTACCTCCTGGCTGGAACCAGTTGCCCTCTGGTGTTCTTCAACCTCCACCTGTCCAGGGCCCAATGGGACCAGGCTGGAGAAAAGCTCCACCACAGCCACAAATGGGGCAGCGTCCACCCT[C/A]GTTGGCGTCTGTCCAGACGCCCAATCATCCACCACCACCATACCCATTTGGAAGCCAGCAGGCTGGACAAGTTTTTAATGCAATGCCACCACATCAGTTGCAACAACAACAGCAGCAGCAGACAGGACCAAACCAGTTTGCAACCCCTCAGCCCAAAGGCCCTCAGGGAGCACCAGGTGTAGTCGTGTCAAGAGCACCTCCTCCTCTGCCTCCCTCTTCTGCTCCACAAGGGAATCTCGCAGCCAAGTCTCCTGGTTCCTCGTCATCTCCTTTCCAACAAGGCTCACCTGGAACTCCTCCAATGATGGGACAGGGGCAACTTGGTTCTCGTCCTACAACTCCACAGGGATTTAGACAAGGTGTTGGATCTCCAGGAAGAGCCGTGATGGGTCAGCAAGGAAACATGCAGCCTGGCTTTATGGGCATTCCACAGCATGCACAGCTTGCTCAAGGTGGTATGGGAGGTATGTTATCAGCTGTTTAATGTGAAAGTGATGATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12672
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105284 | Nonsense | 190 | 1168 | 1 | 5 |
| ENSDART00000105286 | Nonsense | 1101 | 1733 | 21 | 23 |
| ENSDART00000137641 | None | None | 154 | None | 4 |
| ENSDART00000147953 | None | None | 486 | None | 5 |
The following transcripts of ENSDARG00000071272 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 2727360)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 2773840 |
| GRCz11 | 23 | 2715516 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TACAGGACCGAGGACCCCCTGAAATTGGTCAACAATCAGGAAATGGAAAT[C/T]AGCCAATCATTTCCAACCAAGGTTCTAATACACATTTAATGAAATCTGTG
Long Flanking Sequence:
ATTCACAACAGTCAATGCAAATGCAGCAACAGCAGCCACCACAACATCTCCAACAGCAACTACAGTCACAGCCACAACAGCAGCAACAACAGGTACAGCAGCAACAACAAGCCCAACAGCAACAACATCAGCACCAGCAACAACAGATGATGTTGATGCTTAAAATGCAGCAAGAAGCAAAGAATCGAATGCCACTACAGCAAGGTGGGCACATGTCAAAGGGTCTAGTGAATCCCAATGATCCATCTCAGAGAATGCCTGTATCACAGCCTGGCAGCATTCCTTTAATGATTGATCTTCAAGGGCATGGAGGTGTCCCACCCTCTCCTGATAAAGCCAGGGGCATGCCACTCATGGTGAATCCTCCTCTAGCTGGACCAGCAAGAAGGACACCACTTACAGAGGTTGGACAACCAACACCACCGGAGGACATTTCTGGAAACCATAGCTTACAGGACCGAGGACCCCCTGAAATTGGTCAACAATCAGGAAATGGAAAT[C/T]AGCCAATCATTTCCAACCAAGGTTCTAATACACATTTAATGAAATCTGTGCCATTATCAGTGCCCCACCAGACAGGAGCTAGTCCGCAACAGCAGCCTCAGCAATCTCATAATATTCACTTTCCCAGTGCTCCCCCAACATCCCAAAGTTCTCGCCCTAAAACCCCAAATCGAGCCAGTCCCCGACCATATCACCACCCTTTAACTCCAACCAACCGTCCACCTAGCACTGAACCTTCTGAAATAAATCTGTCCCCTGAGAGACTGAATGCCTCCATTGCTGGTCTTTTCCCTCCAAAGATTAACATTCCTCTGCCACCACGGCAGCCAAACCTTAACCGAGGCTTTGATCAGCAAGGTCTTAACCCAACTACTCTTAAAGCAATTGGCCAAGCCCCACCAAGCCTAGCAACTCTTCCTGTCAATAACAATTCCAGTGGCAGTAATAATGGCCCACAGTCTTATCCAGCAGGGGGTGGCCTAGGAAACTCTGGAGGAAAA
Associated Phenotype:
Not determined