ZMP

LOC100330810

Ensembl ID:

ENSDARG00000036308

Human Orthologue:

NOD1

Human Description:

nucleotide-binding oligomerization domain containing 1 [Source:HGNC Symbol;Acc:16390]

Mouse Orthologue:

Nod1

Mouse Description:

nucleotide-binding oligomerization domain containing 1 Gene [Source:MGI Symbol;Acc:MGI:1341839]

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa12613	Nonsense	Available for shipment	Available now
sa17969	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa12613

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

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Mutation:

G > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000052749	Nonsense	566	947	3	11

Genomic Location (Zv9):

Chromosome 16 (position 57299257)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	54030045
GRCz11	16	53715542

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

AGTCRTCACGTCTCTCCTGCATACCTTGCCTAAAAAACACAAAACCCAGA[G/T]AGAGCGATGCATTCCAGACCAACTTTCAATTCACTAATCTATTCCTGTGC

Long Flanking Sequence:

GCTTTAAGCATCTGCAATCAGTGTATGATGACTTTGAGTTGCCGGGTTCCTGTATCACACTCACAAATGTATTCCTGCTGCTCTCCGAGGTTTTTCTCGGACACTCAACTGCACGTCCTGGACTCCTAAGGCGAACATTGAGATGTCCTACGGAGACCTTTAAAGCTGGTGAACAGAAGCTTTCGGGATTTGCTCGACTAGCATTGCACGGTATTGAAACAAGTAAACTGGTGTTCACCTTAGATGAAGCGGTGTGCTGTGGATTAAACGATGAAGATCTTCAGTTTGGGTTTTTAAGACCTGCTTCGCATTACGATTCTTCATCCGCAAGCTCCTTCGAGTTCCTCCACGAGACTCTCCAAGCCTTCCTTGCAGCCTTTTCTCTAGTTCTGGATGCAAAACTAAATCCAGAGTCAATCCTAAAGTTCTTCTCTAAATGCAAATACAAGAAGTCGTCACGTCTCTCCTGCATACCTTGCCTAAAAAACACAAAACCCAGA[G/T]AGAGCGATGCATTCCAGACCAACTTTCAATTCACTAATCTATTCCTGTGCGGACTTTTGTCTAAATCCAACGCAGCTCTCCTGGAGCATCTCGTCCCGCCGTCGGCATTGAAGCAGAAACGCAAGATACTGAAATCGTATTTATCGAACAGCGTGAAAACTCATCTTAAGAGCCTCCCTCGGTCTCCGTCCACAGACATCGAAGGAGATAAAGTGCACGCGATGCCCAACTTCCTGTGGATGCTGCGCTGCATATTTGAGACAAACAGCGAGGACGTGGCCAAGATGACAGCTAACGGCATATCTGCAGATTATATTAAGATTGCGTTCTGTAATATTTACTCTGCCGACTGCAGTGCTTTGAACTTCGTGCTGCACCATCGTAGGAAGCATTTGGGAGTCGATATGGACAATAATAACATTAACGATTATGGCGTGAAGCAACTGCGACCCTCTTTCAGCAAAATGACGGTAGTGAGGTAAGAAAGCAGACAGAGTTTG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa17969

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000052749	Essential Splice Site	784	947	5	11

Genomic Location (Zv9):

Chromosome 16 (position 57296359)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	54032943
GRCz11	16	53718440

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

AAACAAGTAGCAAAGATCATTGAAGAATGTCCACATTTGAGGACYGTCAA[G/A]TGAGTAAACCAGGAATAAACCCTCGCAGAACAAAAACACTSCTGRCGGGG

Long Flanking Sequence:

GAGATGGATAGCATACTTTGTTACTTAGCGATATTTCTCAGACGAAAGAAGGCAGTTTTTGTGACATGGGAGATAAGATTTAAATTTTTCAATAGTTAAACTGCTGTCTAATATGACACCCAGATCTTTTATAGTAGAGCTAACGCTAACTCTGTATCCCTCTAATTGTAGGTTGAGTTGTGAGATCTGCCCTGTACAGGATTTAGGCCCAATAAGTAAGAATTCTGTTTTGTCTGATTTCAAATCAACTTTCAGGTTTTGTGTGAATCAGCTGACAGACAGCGGTATTGAGGTTCTGGCTGAGGAACTCATCAGATATAAAATCGTGAAGGTGTTGGGGTGAGTTTACGGTTTACGGTTCATCTGTTTATCTTATGTTGTATAGACCTCTTTGACTTTGTTTTCTGCATCCACAGCCTTTACCAAAACCACATCACAGATGTTGGAGCCAAACAAGTAGCAAAGATCATTGAAGAATGTCCACATTTGAGGACCGTCAA[G/A]TGAGTAAACCAGGAATAAACCCTCGCAGAACAAAAACACTCCTGACGGGGGAATATTTTTCACTAGCATTCGTTCAAACAGCGTGATTTTGGGGGGATTTTGCATTTATACATATATTTATTCATAGTGCTCAGCATAAATGAGTACAGCTCCTTTTGAAAATGAGTTTCTCAGTGAAAATAGACAATAACTGTTGGAGTGTTTAAACTAAATCTTATAAATGTACACACAGATAATGCATGGTGGTCACTTGTTTGTGTTTTGCACAGGCTCGGCTGCAACAACATCACAAGTGTAGGTGGGAAATATCTCGCCAGCGCGATTCACAAGAGCAAATCTATCTTTGATATAGGGTGAGAATTCATCTTAGGGAACAATTAATCCTCACGTAAAAGAGCAGGTCATATGGGCTGTCAGAAATATCTTATTTGCTATGTATCTTCAATGTGAACTGTCTGCAAAGGTAAACAAAAATAGTGCATGATGAAGACATCGACTCT

Associated Phenotype:

Not determined