Busch Lab

ZMP

SHANK1 (1 of 3)

Ensembl ID:
ENSDARG00000060539
Description:
SH3 and multiple ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:15474]
Human Orthologue:
SHANK1
Human Description:
SH3 and multiple ankyrin repeat domains 1 [Source:HGNC Symbol;Acc:15474]
Mouse Orthologue:
Shank1
Mouse Description:
SH3/ankyrin domain gene 1 Gene [Source:MGI Symbol;Acc:MGI:3613677]

Alleles

There are 12 alleles of this gene:

Allele Name Consequence Status Availability
sa20034 Nonsense Available for shipment Available now
sa20033 Nonsense Available for shipment Available now
sa12603 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa20034
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085327 Nonsense 36 1695 1 33
Genomic Location (Zv9):
Chromosome 3 (position 30921246)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 30639285
GRCz11 3 30770127
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTGCAGTCTGACTGAGTCTCTGAGGGATGTTTTAAACTATGGTCTTTTT[C/T]AACCTGCCACTGACGGGCACGATGCCAAGTTCCTGGAGGAGGAGAGGCCG
Long Flanking Sequence:
TGCAACTATAAAATTACCCAAACAAATTAATACAATTACTATAAAAAAAGTATTTACATAATTTACTATAGTATTTTTCATGGTGGAATAGTGTAAAATACTATTTGCCCTAGGAAATGTTAAATTAATAAAAATAAGAACTTAAAATACATTTTTTACTGAATGTTGTCTGCAAGTTCTCCATTGTAAAAGTGGGTTTTTACTGTGTGTGTCTCATTAATATTCCCACCACTAGCCTTGTACTTTTCTGCCTATATTTTTCACTAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATTGTATGATATAAACTCAGCAGCTAAATCTGTTTGTCTGACAGACATTGTTTTTTCTTTCTGTCTCCATAGAAATGTCTGAGGTTCAACCCTGATGCAACCGTATGGAAGGCGAAGCAGCAGGTGATGTGCAGTCTGACTGAGTCTCTGAGGGATGTTTTAAACTATGGTCTTTTT[C/T]AACCTGCCACTGACGGGCACGATGCCAAGTTCCTGGAGGAGGAGAGGCCGCTCCGCGAGTACCCACAATCCTTTGAGAAAGGAGTACCTTACCTGGAGGTAGCTTTCCTTTTGTTTCCGTTTTGTGTTTTACTTTTTTTTTAATGTTTTTTTTACTCTTGCTCTATAATTGAATGTGAACATTGGTGCTAGGAAACTGCTGCTTCAAATTGTTTGTTGCCTTGGTGATAATTCTTTTAGCAGCTTCTCTGGTAACTATGAATCTTAATAACCCTTACATGGAAATTTGTCATGTAATAAGAACTATTACAATTATTATTATTTATTATATTTTGAGCAAGTACTATTATACAACAATAGTCAGCTTAGAGTCCAATTCCTAGAAGCCTGTTTTATCTAATGTTGATCATAATAATACTGATAGTGACACCTCTTTGTTAAAGGAACTCAAATGCTACTGTTTTCCCATTTATGAAGAGTTACAGCTCACGATTAACAGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20033
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085327 Nonsense 846 1695 21 33
Genomic Location (Zv9):
Chromosome 3 (position 30856123)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 30574162
GRCz11 3 30705004
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCTATGTCTCAGTCTACTTCCTCTGCTGCACATTATCAACTCTACTCA[C/T]AGTCAGTACATGTTACTCACGGACCAAGGGACAGGTCCCCTGGACCACCT
Long Flanking Sequence:
TCAGTCATGGTAATAAACAGACAAGCTGACAGACAGACAGACAGACTACAAGATGGTCTCTTTTCTGTATCCTGTTTTGTTTGTCCTTTGCTCAGTATTAGAAAATAAATATATCTTTTCCTTTTTTGGTTATTTTCTCACTTCCAAATGTTGTACATTTATCTTGTCTCCCAAAAATATTTTTCTTTCGTCTTTGTTGTTTAGAAACATTTTATTTTAATTCTCCCTTTATACATTTTCTTGAAAATGTATTTCATCTTTTTTTTTCTGCAGGGGTTCCTGAGGAGGAGAAGCAGTTTCTTCATCCTCCAGCCATGAAGTTTGCCCGTAGTCTTTCAGTACCTGGCCCAGATGAAATCCCTCCTCCACCTACTACAGCACCCCCTGAGCCCCCTTTTTCCTCAGCTCCTCCGCTTGGCTTTAGGGGCAAGACATCTCAACAGCCGTCTGTTTCTATGTCTCAGTCTACTTCCTCTGCTGCACATTATCAACTCTACTCA[C/T]AGTCAGTACATGTTACTCACGGACCAAGGGACAGGTCCCCTGGACCACCTACTGGGTCTGGAACTGGGGACCTTGCTTATTCCCATGCCCAAGCCCACCCCTCTGTACCAAGTAGGACTGCCTCCAGGAAGGTGATTGGGTACACAGGAGATCTTGCAGGGGCTGGAGGAGTGGCTGGGGCCAAAGCTGCAGCATTGAGAAGGGGTTACAGCAATGCAGTCCCACCCACCAGTGTCGCTACTGTGATTCCACAACAGCAGCAGACTACTCAGAACCAACCTTCCAGAATGGACCGGAGTGGAATGGGGGTAGGGGCTGGTGGTGTACCAAAAGGCGGTGCTCGTAGAGGAAAGGGGCCCTTGGTGAAACAGTCAAAGGTGGAAGACCTGCGTCAAGGTCAAGACACTCTAGAAGCAAAGGTGTCAGTGGAGAAGAGCTCTATTCCAATCCCAACTATCATTGTTAAAGCCCCTTCCACCAGCAGTAGTGGACGCAGTAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12603
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000085327 Nonsense 1640 1695 33 33
Genomic Location (Zv9):
Chromosome 3 (position 30851563)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 30569602
GRCz11 3 30700444
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTTGCCTCAAAACCTCTCCCATACTGGACCAAGTATGATGTTGCAGATT[G/A]GCTGGGCTACCTGAACCTGGGTGAACAMAGGGAGCGATTCTTAGACAATG
Long Flanking Sequence:
CAAACACCGGCCTGTTTATCGCACCAAAGCTCTGGAGTTCCAATTTATTCCCAGTCGAGAGTCACGAAAGTCAGAGTCGCATCATGCCCAGCGCAGACGAGCACCCAGCCCTTTAATTTCTCCATCTGACCGTCCCAAGCTTGGCCCTCCCCGCCCCTCTTCCCTTCCTATTCTCCCCACTACACCCCTCTATAGCAGCCTGTATGACCTTCGTGGTTCTATTACTCCACCCTCACCTGCCAATCCCCTTGGGGACCCCTACTTTTCCCCCTCCCCCCCTCTATTTGCCCCCTCGGGTGCTCCCCCTCCTCCAAATTCCTCTCTGGTGGTCTCACGGTCCCTGTCACCCACTCACTTCCTGTCAGGGACTTCATCCCCACCTCTCCACCCCATTCCTCCACCCACTTGCCTGAGTTACCCCCATCTTCCACCCCCCTCACCCACAAAGCCCTTTGCCTCAAAACCTCTCCCATACTGGACCAAGTATGATGTTGCAGATT[G/A]GCTGGGCTACCTGAACCTGGGTGAACACAGGGAGCGATTCTTAGACAATGAAATTGATGGCACGCACCTGCCCTCTCTTACCAAGGATGACTACCTGGACCTGGGTGTGACCCGAGTTGGCCATCGCATGAACATAGAGAGGGCGCTCAGGAGAGTTATGGACAGGTGAGAGGAGAGAAAAGGGGGAAGCAGAGAGATGCAAGGGATGTCTGCAATGGAGAGGGATTAGGGTGAGGGGTAGTGCATGAGCAAAAAAGCTATTATACTTAAGGTAACTCTTGATATGCTATTGATTGCTAACTTCAGAGAACACTTGGAGTGGGCCACTGCATGAGGTCCAGGATGGCATGGGGAAAGAAATGGAGAACTGAAAGAGGGGGATGTGGGAGAGCAAGAGAAAAATACTTCCTTATAAAGACTTTCCACCTTCCCCCCCCTATCATCAGGCTGTCTTCTAGCACTTTCCCCATTTCTGCTCTCTCTCCTCGAAATGGACGGAC
Associated Phenotype:
Not determined