Busch Lab

ZMP

fn1

Ensembl ID:
ENSDARG00000019815
ZFIN ID:
ZDB-GENE-000426-1
Description:
fibronectin [Source:RefSeq peptide;Acc:NP_571595]
Human Orthologue:
FN1
Human Description:
fibronectin 1 [Source:HGNC Symbol;Acc:3778]
Mouse Orthologue:
Fn1
Mouse Description:
fibronectin 1 Gene [Source:MGI Symbol;Acc:MGI:95566]

Alleles

There are 11 alleles of this gene:

Allele Name Consequence Status Availability
sa6112 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa12585 Nonsense Available for shipment Available now
sa34594 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa21453 Essential Splice Site Available for shipment Available now
sa7625 Missense Mutation detected in F1 DNA Not yet available
sa21452 Nonsense Available for shipment Available now
sa34593 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa27367 Nonsense Mutation detected in F1 DNA Not yet available
sa27366 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa27365 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa6112
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Essential Splice Site 43 2477 1 51
ENSDART00000124346 Essential Splice Site 43 2480 1 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15700651)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15453216
GRCz11 9 15424419
KASP Assay ID:
554-3706.1 (used for ordering genotyping assays)
KASP Sequence:
GAAACATAAAAGACAAGCTCAGGAACACTCTGTATCATCTGTGTCACAAG[G/A]TAGGAGGCACTCTRTGTGTATTGGCTTTGGGTTTATTTCATTTATTTTAT
Long Flanking Sequence:
AAAAAGGTAGACTACTAGGTCACAATGACATCGGCTTAAAGCTTTCAATTTAGCATTTTGTGTAGTAAAATGTTTCAAATAAAAACGCCAGATTCACGCGAGGGCGTCTGCATGGACTCTCTCGTGCGCGTGTGACGGGGTAGCCAAGATCCTCCTCCTCCTCCAGGGCGGAATGTAGAGGTCAAATAAAAGCGCTCCGCACATATGAGCTCCGCAGAGGTGCACGCAAGAGCAAGAGGGTTAGGAACGGGGCACAGAACCGTACACAGGAAACTTGGAGCGGCTGCGGACACTGAATCCCCGAGCCAATCAACTCCTCGAGGAAACGAAGGGTTAACTTTTAGCGTGTTCAATCGCACCTGTGAAAAAAATGTTTGGTGGCCCTTTGGGCACGGCGCTTGCGGTGGCATTGCTTGCCTGCGCTGTGCAGTGTATGCCGAAAGGAACGGGGAAACATAAAAGACAAGCTCAGGAACACTCTGTATCATCTGTGTCACAAG[G/A]TAGGAGGCACTCTGTGTGTATTGGCTTTGGGTTTATTTCATTTATTTTATTATTATGATTACTATTATGGGTATTATAATTATTTTGCAGACGCAAATTGTTTTATAAAGGCTGGCACACTGGAAAAAATATTGATTGGATTTGCTTTTTTTTGTAAGAAGTGGTTAAATTTAGTAATGTTTAACTTGTTTGTTTAAATTCAACCCATAAAAATTCTTTGATATCACTTTCCTTAAAAAAAGTAAATCCAAATCCATTTTTTTCAGTGTAGATGTATGAAGTTTTATGTATTTAGTTTTTGCTACTTAGTGTGATTTTTATTTGATCATGGAAAAGTTAACATGCTGCAAAACTCAGTGAGGTTTTGTTGTGTACTGTGCAGATGGATGTGTTATGGACGGACAGTTTTATGGAGCTGGAGAGAAGTGGGAGCGCATTTATCTGGGCAGCACGCTTCTTTGCACTTGTCATGGAGTTTCTAAAATAGAGTGTAAATCAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12585
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Nonsense 156 2477 4 51
ENSDART00000124346 Nonsense 156 2480 4 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15698343)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15450908
GRCz11 9 15422111
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCCTACAAGATTGGAGACAYATGGCAGAGACCTCATGACACTGGAGACTA[C/A]ATGCTGGAGTGTGTCTGCTTGGGAAATGGGAAGGGGGAGTGGACCTGTAA
Long Flanking Sequence:
AACTTAAAATCTCCTTTAGTGTTCTACTACAGAAAAAAAAAGCCAACTACATCTAGGATGATAAATCCTGAAGATAAATCAATAAACTGCCAGTTTTCATTTTTGGAAGCATTAACTATGCCTTTAAGTTTTGTATGTTTGTATTTATACCAACTGGTGTGAAGAACAAAGTCCATGTGTGTTCCCAGCTGAGGAGACCTGCTACGATAAAGTCAATTCTCGTTCCTACCGGGTTGGAGAGACTTACGAGAGGCCCAAGGACGGAATGATCTGGGACTGTACTTGCATTGGCTCTGCCCGAGGGAAAATCAGTTGCACCATTGCGAGTGGGTAGACTGGAACTTTCCTTTACTGTACTTAACCGCAAGTTGGGAATTAGACTTTTGGAAGTTGTGCTTGCTGTTTACCTACTTGGCCTCTGTTGTAGACCGCTGTCATGAGGGAGGGCACTCCTACAAGATTGGAGACACATGGCAGAGACCTCATGACACTGGAGACTA[C/A]ATGCTGGAGTGTGTCTGCTTGGGAAATGGGAAGGGGGAGTGGACCTGTAAACCTGTTGGTAAGTTTGGACTTTTTCATCCCATCATCAAGTTTTGTGGTTTGCTATACTCTTAAGCATTACATTTAACAGATTAATAATAAATAGATTTTTAAGGCTGGAAAACCAAATAAGTTCTAGATTAAGAAACTCCTTCTTCTGTCAGTTGGTGTGATTTTAAGTTAACCTGCCGGCAGCTAGCTCTCTGCAACTCTCACATGGTCGCCCACTGAAGCTAAGCAGGGCTGCGCCCAGTCAGTACCTGGATGGGAGACCACATGGGAAAGCTAGGTTGCTGCCGGAAGTGGTGTTAGTGAGGCCAGCAGGGGGCGCCCAACTTGCGGTCTGTGTGGGTCCTAATGCCCCAGTATAGTGACGGGGACTCTATACTGCTCTGTGAGCGCCGTCTTTCGGATGAGACGTTAAACTGAGGTCCCGACTCTCTGTGGTCATTAAAAATCCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34594
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Essential Splice Site 222 2477 None 51
ENSDART00000124346 Essential Splice Site 222 2480 None 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15695862)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15448427
GRCz11 9 15419630
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCACCTGCCTCGGAGAAGGAAGTGGACGTATTACATGCACATCCAGAAG[T/C]AAAAACTCCAGCTTTTTTTATAGAATAGTGCAACAGTCCAAACCTCACAA
Long Flanking Sequence:
GTCACTGTGCTGTTTATTTAAGTGAAGAGCAACACAGAGAGATCTCTATGGCTCTGACATGCACTGTGGGCAGGGAGAACTAGCTCATTTGCATTAAAAGTACATGCAACAAAACAGCTACAATGTCCTAACAGCTTAAATGTCCATAATTCAAATATATAAGCGAGCTTTTTTGCTGTAGAATGTTTTGTCAAAATATTCAGATTTGACATTAAATATGTTGACATACTGTAGGAATAAATCTGCAATTGTAAAATGATTTCTTGGTAACTTTAAATGTATTTATGGTCATTTTTGACATTATTGATGGTATTAATTTTAACAACATTTTAATGAATCCACTTTTTTTTTTCCTTCATAGCGGAGCGCTGTTATGATAATACAGCTGGCACCTCCTACATGGTTGGTGAGACCTGGGAGAAGCCCTACCAGGGCTGGATGATTGTGGACTGCACCTGCCTCGGAGAAGGAAGTGGACGTATTACATGCACATCCAGAAG[T/C]AAAAACTCCAGCTTTTTTTATAGAATAGTGCAACAGTCCAAACCTCACAAACCTCCCTTTTCCAATCTTTCAGCTCGATTTCACTTTAATTATCCACTTAAAGTGCAGTTAAACTTTCTGGCATTTTTAACTAAATAGAAGAGAGGGAAACTTTTACTTTATTGCATTAAAAAAAAAGCTTACTCAAGCTTAACTGGTAACTGTTATTGATGAAGAAAAAGGTTCTAATGGGAAACATCTGCATCGTATATTTGTGTGTATCACAGACCGCTGTAATGACCAGGACACACGCACTTCTTACCGGATTGGGGACACGTGGAGTAAGACGGACTCTCGTGGACACGTTTTACAGTGTTTGTGTACTGGTAATGGACGTGGAGAGTGGAAGTGTGAGAGGCATGCTTCTCTGCACACTACTAGTCTTGGTAAGAGCTTCATATTAAAACTGTTTTAAAGTACTAATTTAGCAAAAATGCACATTTCTGCCATTTAATTAATTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21453
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Essential Splice Site 341 2477 None 51
ENSDART00000124346 Essential Splice Site 341 2480 None 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15693775)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15446340
GRCz11 9 15417543
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCATTTAGACTGAATGGTTTTTATCTAAGTTTCTTACTGTCTTTTGTGT[A/T]GAGAGTCAATCTCAGGTGTATGGCGGGACCTCAGGTGGCGAACCGTGTGC
Long Flanking Sequence:
TCAAAAATGATACAGGAATATTGTAGAGCAGAACATTTTTCGTTTGTCTGAAACCTTTTTAAAGGCCTTCTTATGCTAAAAATGGTACTAATACATTCAAATGTAAATGTATTATTGGCGTCCATTCATATAAACTTGCATAAGACCCCTAGTGTTCCCCGCCCACCTAATGAATGTAGAAACTAAATGTGTATCCTATGTTTTATTTTTAACTGCAGGTACTGGGTCTCGTGTTGTGACCAATGTCCAGCCAGCAGTGTACCACCCACAAGGGGTGCCTGAACACCCTGTGGAGGGATCCTGTCTGACTGAAGCAGGTGTTTCCTATGCTCCAGGCATGCGCTGGAGCAAGGCTCAAGGTAGCAAGCAGATGTTGTGTACCTGCTTAGGAAACGGTGTCAGCTGTGAAGAGTCAGGTTTGTGTCTTTTATTCAAACAAGTCTGTCATTTTTCATTTAGACTGAATGGTTTTTATCTAAGTTTCTTACTGTCTTTTGTGT[A/T]GAGAGTCAATCTCAGGTGTATGGCGGGACCTCAGGTGGCGAACCGTGTGCTTTCCCTTTTGTGTTCATGGGGAAAACGTTTTACTCCTGCACGTCTGAGGGACGCAATGATGGACAGCTTTGGTGCAGCACCTCATCTGACTTTGAGAAAGACTACAAGTATTCCTTCTGTACCAGCAACAATGGTAAGTTCATAACAGAGTTTGTAAGATTTTATTTGTTGAAAGACTTCTTTTATACTGTCTATATACGAGTGATTGTATTTTATCAGAGTTAAAGTATGTTTTTAAACATATTTTTAACAATTTATTATGAATGTTATATATTTTAATATGTTAATTTGGCATCCAATAAAGCTTTGTATGTTAAATCAATGTTGAATAAAGTTGTGCAGCATGATATTTTTGTGGAAGCTTTTCAAATGATTAATTTATACAGTAAATGTGACCCTAAATCCTAGTCTTACGTTGCATAAGTAAACATATACAATAATATTTATTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7625
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Missense 356 2477 8 51
ENSDART00000124346 Missense 356 2480 8 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15693729)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15446294
GRCz11 9 15417497
KASP Assay ID:
554-4218.1 (used for ordering genotyping assays)
KASP Sequence:
GTGTAGAGAGTCAATCTCWGGTGTATGGCGGGACCTCAGGTGGCGAACCK[T/A]GTGCTTTCCCTTTTGTGTTCATGGGGAAAACGTTTTACTCCTGCACGTCT
Long Flanking Sequence:
TCTGAAACCTTTTTAAAGGCCTTCTTATGCTAAAAATGGTACTAATACATTCAAATGTAAATGTATTATTGGCGTCCATTCATATAAACTTGCATAAGACCCCTAGTGTTCCCCGCCCACCTAATGAATGTAGAAACTAAATGTGTATCCTATGTTTTATTTTTAACTGCAGGTACTGGGTCTCGTGTTGTGACCAATGTCCAGCCAGCAGTGTACCACCCACAAGGGGTGCCTGAACACCCTGTGGAGGGATCCTGTCTGACTGAAGCAGGTGTTTCCTATGCTCCAGGCATGCGCTGGAGCAAGGCTCAAGGTAGCAAGCAGATGTTGTGTACCTGCTTAGGAAACGGTGTCAGCTGTGAAGAGTCAGGTTTGTGTCTTTTATTCAAACAAGTCTGTCATTTTTCATTTAGACTGAATGGTTTTTATCTAAGTTTCTTACTGTCTTTTGTGTAGAGAGTCAATCTCAGGTGTATGGCGGGACCTCAGGTGGCGAACCG[T/A]GTGCTTTCCCTTTTGTGTTCATGGGGAAAACGTTTTACTCCTGCACGTCTGAGGGACGCAATGATGGACAGCTTTGGTGCAGCACCTCATCTGACTTTGAGAAAGACTACAAGTATTCCTTCTGTACCAGCAACAATGGTAAGTTCATAACAGAGTTTGTAAGATTTTATTTGTTGAAAGACTTCTTTTATACTGTCTATATACGAGTGATTGTATTTTATCAGAGTTAAAGTATGTTTTTAAACATATTTTTAACAATTTATTATGAATGTTATATATTTTAATATGTTAATTTGGCATCCAATAAAGCTTTGTATGTTAAATCAATGTTGAATAAAGTTGTGCAGCATGATATTTTTGTGGAAGCTTTTCAAATGATTAATTTATACAGTAAATGTGACCCTAAATCCTAGTCTTACGTTGCATAAGTAAACATATACAATAATATTTATTCTTGTATGTCCTAAACCATTAGAATATTAAATAAAGATCATGTTCCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21452
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Nonsense 787 2477 16 51
ENSDART00000124346 Nonsense 787 2480 16 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15675924)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15428489
GRCz11 9 15399692
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGAACATCAGTGAACTTCTGCCAGGAAGGAAGTACACTGTGAATGTATA[T/A]GAAGTGACAGGAGAAGGAGAACCTAACCTCATCCTCACCACTTCCCAGAC
Long Flanking Sequence:
TGTAGGTCATCCAGCTTTGTCTCGTTAACTAAATGTGTATCCATGTTTTAGTGCAGAAATTATTATTCTTATTATGCAAGTTCATGAATGGGACACAATATATCCAACATCTCTCTAGTGGAGACCTCTGAGGGTGAGACCACCCAGCCCCCTCGAATGGTGGACACCTCTGAGTCAGTGACTGAAATCACCTCAAGCAGTTTCGTCATCTCCTGGGTGTCTGCGTCTGACACCGTGTCTGGTTTTAGGGTGGAATATGAGCTGAGTGAAGAGGGAGGCCAGACTGGACAGCCCATGATCTTGGGTCAGTATCTTCACCTCAAGTATGGTGTCATCAGCTTAGACTAGTAAACCTCATAATACTGATTTGCAAAAATTGTATGCTCCAATTTTCATAATACCGGTCAACTTGATGATCTGTTTCCAGACCTCCCTCATAGCGCTACGTCCGTGAACATCAGTGAACTTCTGCCAGGAAGGAAGTACACTGTGAATGTATA[T/A]GAAGTGACAGGAGAAGGAGAACCTAACCTCATCCTCACCACTTCCCAGACTACTGGTGAGCCTTTTCTCTCCGTCTTTTTTCTCTTTTACAAAAAAATGGCTTGAAATATCTCTAAATGTGTATATATATATATATATATATATATATATATATATACATACATACATACATACATACATACATACATATATATATATATATATATATATATATATATATATATATATATATATATATATACATACATATATATATAAAAAAATTAAAACATTAAAAAAACCTAACAAAACAAACTAGTGTTTTGACATTAAAATATGTGGCTAAGAAATAAAAAAAACTTTGTTTTTTTCTGTTGTGGCAAGCAAAAAAAGAAAAGAAAAGAAAATAGCCAGGAAATTAGAAAAAATCCTTAGTGTTTAGCTCTGTATAAGTCTAAAATTTATGATGGTCTTAAAAGGGTTTTAAAAAGTCTTATATTTGACATGATGATGGCTGCAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa34593
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Essential Splice Site 1170 2477 24 51
ENSDART00000124346 Essential Splice Site 1172 2480 22 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15663775)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15416340
GRCz11 9 15387543
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCAGTGGTCAAGAGCATGGAAACCCTATAACTCGGCGCGTGGTCACTCG[T/A]AAGTCTAAAAAAAGTCCTTATCAAACAAAGGTTGTTGAAGCTGTGAGAGA
Long Flanking Sequence:
TGACAGTGTTTAAATCATTGCAACTTATTAACTCCTTAAACTAAGTTAACTATTTTCTAACTTGATTTCATAAGTTCCGCAAGCTATTTTAAGTCTGTTTAACATAAGTTTAATAAGCTCAAAAGGTTCATATAAATCGGCTTAACTTTTAAGGGCAACCAGGATTACAGTGTGAAAAACGTTTTGAAATTCTATTGTTTAATTTGGGATGAAACTAAACTTATACATTACATGGTTGAGTGTTTAGTGCAGTTTTTAAGTGCATATGTGTATACTAGTGTGTCATTTGCAATGCAGCTAAAGGTGTTTTATTGTTTCTCTGCTCTGCAGTTGACAGTGAGGCCCAGCCAAGGTGGAGAAGCCCCTAGAGATGTGACCTCAGAGTTGGGTAGTGTCCTCATCTCAGGTCTGACCCCTGGAGTTGAGTACACATACAGTGTCCAACCAGTCATCAGTGGTCAAGAGCATGGAAACCCTATAACTCGGCGCGTGGTCACTCG[T/A]AAGTCTAAAAAAAGTCCTTATCAAACAAAGGTTGTTGAAGCTGTGAGAGAGAGACATTTCCCAGACTGTTGGAGGAGTTATCCAATGTCTGTCTATCCGTTCACAGCTCTTTCTCCACCCACTGATCTGAACCTGGAGTCCAACCCCAACACCGGAAAGCTAACTGTTCAGTGGAATGATGCTAACATCCCAGGTTAGTTCTGAGAGCTCAGAATAGAGCAAATGCTTCTTTATGTGTTTGTTCAAATGTAAATACTAATATATTCTACCATCTTGCATAATGCGGTACATTTAATTGAAGACATTTTGGTAACACCTATCATCACCTATCATAATTGTATTATTATTATTATTATTATTATTGTATTATAGTATGCTAGTAAGCTGGATAAATTACTGGTTCATTCTCCTGTGGGGACCAGTTGAATAAAGGGACTTAGTCAAAGGAAAATGAATGTATTATGTGCTTTTCTTAAACTTAGTGTTGCAAGATATACAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27367
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Nonsense 1226 2477 26 51
ENSDART00000124346 Nonsense 1228 2480 24 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15662924)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15415489
GRCz11 9 15386692
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCACCAAAGGCCAGCAGGGCAATTCACTTGAGGAGTTTGTGAAGGCCGGA[C/T]AGAACTCATGCACATTAGAGAACCTGAGTCCAGGAGTAGAGTACAATGTC
Long Flanking Sequence:
TATTATTATTATTGTATTATAGTATGCTAGTAAGCTGGATAAATTACTGGTTCATTCTCCTGTGGGGACCAGTTGAATAAAGGGACTTAGTCAAAGGAAAATGAATGTATTATGTGCTTTTCTTAAACTTAGTGTTGCAAGATATACAATAACAAATAAAAATGCAGAGAATTACAAGCTGGCATAAAATCCCAAATAAGAAGCCAGAAGCCAGAAGTCACACTGCAATCATAAAACAATAAAGAACAATAAATAAGCAAAATGTTTATTTATGTTTAAAACAATGTAATACAAGTATATAAGCACATCTGTTTTCAACGCTAATGATGCTAATAATAAGAAATGTTTATTGAGCAGCAAATCAGCTTGTGTGTCGAGACTGCAAATTTACCTCTTGGTAAACTTGTCCTGTTCCCACAGACATCACGGGCTACAGAGTGACCTGCACCCCCACCAAAGGCCAGCAGGGCAATTCACTTGAGGAGTTTGTGAAGGCCGGA[C/T]AGAACTCATGCACATTAGAGAACCTGAGTCCAGGAGTAGAGTACAATGTCAGCGTGTTCACTGTGAAGGACGACATGGAGAGCGTTCCTGTCTTCACAACTGTAACCCCAGGTATAACCGCTTCTAAATACCAAAATCACACCTGTTGTTTGTCAGTAATCAGGCCTAAACATTTAATGAGTCTGTATGTGTGTCAGAACAATTAATGAAATGCTTGCTTTTAATGTTTCTTGAGACATTAAACACAAAGGTATTAACAGAATGGTATAGCCAAAACTGAAATAAATTCCTGACTATTTACACCCAGGTTGTCCAAGATATATATGAAATGTTGCAGGGAAATGTTTCTAATCTAATGCAAGTGTAGAGGGTTCAGAAACATACCATTTTTTAAGGTCCTACAGCAGTTTAGTCTCAGGCCAATGTAATCCACACAATTCCGACAAATAAGGGGAAGTGATCAGTAATTTTATTGGGTTTGTTTAAATGTAGTTTGGTGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27366
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Essential Splice Site 1448 2477 31 51
ENSDART00000124346 Essential Splice Site 1450 2480 28 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15656909)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15409474
GRCz11 9 15380677
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTACTGCAACCTGTTATGTTGGTTAAAAAACTTGTTCATTTTGCTTCTCA[G/A]TTTTTGATGCCCCTGTTGGCCTTCAGTTCTCTGATGTGGGCACCACCTCC
Long Flanking Sequence:
AAATAAAAAGCTTAGCAATGCTCATTGCTAATCAAAAATAGAGTTTTGATATATTTACAGTAGAAAAATTTAAGTCTTCATGGAACAGGATCTTTGCTTAATATTCTTATGATTTTGGGCATAAAATCAATAGTTCTGAATCATACATGTGTTTATCCAACTTTCCCATGCAACATAGGCTAAGAAAAAAATCAATCATTGGATGTATTAAATTTGTTTTAAGGTAAAGGGTTGAGTTTTAAAAACACATCAAGTTGAACATTACTAAACTGAATCCGTTTAAATTCAGCCCATATAAATTTGCAAGCACAAATTTATAGTAGTAAATCCAGTCAATCGTGTTTTTCAGTGCAAGCTCACATTTATGGTTTTTAATGTTTGAATATATTGGATGGAGTTCCCTCTCAAATATATATTTGAAAGTCCTTGCTATAAAATAAAAAAACAGCACTACTGCAACCTGTTATGTTGGTTAAAAAACTTGTTCATTTTGCTTCTCA[G/A]TTTTTGATGCCCCTGTTGGCCTTCAGTTCTCTGATGTGGGCACCACCTCCTTCACTGTGCGCTGGCAGGCTCCTCGGGCCATCATCTCAGGATACCGTATCCGCTACCAGATGACCAGTGGTGGACGAGCTAAAGAGGAGAGACTGCCCCCCTCGAGGAGCCACTTCACCCTGACAGGCCTGACCCCAGAGACTGAGTACAGCATCAGTGTCTATGCCGTCAGCGGATCCAGAGACAGTCTGCCTCTGACTGGAACTCAGTCTACCAGTATGCTCTTACTTCTCATCACTTTTAGAACATATTTGTATTATTTGTGTCTTATCGCTGTTTTTCTGTTAGTCTCTGATGCTCCTACTGACCTGGAAGTGATTTCCTCAACGCCGACCAGCATCACCGTTCGCTGGGATGCCCCCTCTGTCACTGTGCGGTACTACAGGATTACACATGGAGAGTCGGGTAGGTGATTTGGATCCTGTTAAAATAATGCTGTTATGGTTGTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27365
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000010521 Nonsense 2349 2477 48 51
ENSDART00000124346 Nonsense 2352 2480 43 46

The following transcripts of ENSDARG00000019815 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 15641731)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 15394296
GRCz11 9 15365499
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACGCATCTCTCAATCTGTAGAATGGTGCCATGACAGTGGCCACAACTAC[C/T]GAATCGGTGAGAAATGGGACCGGCGTGCTGAGAACGGCCACATGATGAGC
Long Flanking Sequence:
TGCTCAAAAACTGAAAGCTTTGGGTAAAATGACTTAACATTTATTCGTTTTCCAATATCTTTATATAACTTTTTTGAATGGATCCACTTGGAAGAGCTTCCAAGCTGTATTGAAGGTCAAAAAAGCCATATGTGTACAGTATGTGTAATATGTTGACAAAAACATGGATCAAATGGATCAGAAATAGTGCAAATGTAGCCTAAAGAAAGTTCAGATTTCTTTTTGTTGCCCATTTTAGCTATTCTTGATATGTTTGTAGAGGTAATCAAACATGACATCCAGAGATGAGGTGCTTCACGTCTCACAATTTATATTGTCAGCCTTTAACCAGACGATATTAAACTCTGATGCCAGCATATAATGCTTAGTAACCACTGTATGAATGTGCATGACAGATGAATTCACTGGAAACTCTGAAAAGTCACTTATCAGGGTTTACATGCTAACCAACACGCATCTCTCAATCTGTAGAATGGTGCCATGACAGTGGCCACAACTAC[C/T]GAATCGGTGAGAAATGGGACCGGCGTGCTGAGAACGGCCACATGATGAGCTGTACATGTCTGGGAAATGGGAAAGGAGAGTTTAAGTGTGAACCTCGTAAGTGTACTTTATCCCACAGTTGTGTCTTAGCAGATTGGAACATCAATTGAATGCTGACGTTCATTGTCCCCTTTAGATGAATCCACCTGTTATGACGAGGGGAAATTGTACCAGGTGGGCAACCAGTGGCAAAAGGAGTATCTTGGAGCCATTTGCACATGTACCTGCTACGGAGGACAACAGGTAACACTGGATTTCAATGTTGTTTATATATAAGTGTGTTTGTAGTTTCTGCATTGCGTTTGCATATTTATAATCATGCTCTCTGTGTAGGGCTGGCGCTGTGAGAACTGTCGCCGTCCTGGTGCTGAAGTTGATGCAGACCTCATTCAGCCTCCAGTACGCACTGATGCTTTCGACCGATACAGGGAGAACGCTCTACGCAAACTGGTTGGTCTTTT
Associated Phenotype:
Not determined