ZMP

taf5

Ensembl ID:

ENSDARG00000018325

ZFIN ID:

ZDB-GENE-051120-180

Description:

transcription initiation factor TFIID subunit 5 [Source:RefSeq peptide;Acc:NP_001032508]

Human Orthologue:

TAF5

Human Description:

TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa [Source:HGNC Symbol

Mouse Orthologue:

Taf5

Mouse Description:

TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor Gene [Source:MGI Symbol;Acc

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa38290	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa12584	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa38290

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000015007	Essential Splice Site	147	756	1	11

Genomic Location (Zv9):

Chromosome 1 (position 49922149)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	48771330
GRCz11	1	49415750

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GCCGGTGCAGCCGCCCCGCAGAGCACACTCACCCCCATACCTGCGAAGAG[T/C]GAGTGACAGCCGCAGACACACACTGATGCTGGGGCATCACTTTTATTAAA

Long Flanking Sequence:

TTAAAGTTCACATGAAAAAAAAATAAAAATAAAACGTCAGATTTACGTCAGACGTACCACATGCGTCATGACGTAATCACATCCAGCGCCGGGGGAAAAATGGCGGCTGTGCAGGATGGACCGATGGAGGTGGACGCAGAGAAAGAGACAAAACCCGAAATCCTCAGCGATGGGACGGCAAATCCGTCGGGGAACACCGGCGGCGGGACTCTGTCCTCATCGCCACTCACCGCAGCCCCGGCCGCCGGAGCCCCGAAGCCGGAGGACCAGCAAACTCTGCTCGCGGTGCTGCAGTTCCTGAAGCGAAGTAAACTGGCGGAATCGGTGGAGATCCTGCGGCGGGAGGCTGGTTTAGCAGAGGAGCTGGAGGACTCGCATACCGACGCCGGTGCAGGAGGGAAGGACGGAGACGCAGGAGATACAAAAACTCTGCTCAGCCGTGTGTCCATCGCCGGTGCAGCCGCCCCGCAGAGCACACTCACCCCCATACCTGCGAAGAG[T/C]GAGTGACAGCCGCAGACACACACTGATGCTGGGGCATCACTTTTATTAAACCCACTGAATGATTAAATGCACTAGAACAGAGTCATCAACAGTAGTTATTTCTAGAAGATGTAAAACAGTTCTTTTGTAGCACCCTCACCACCTGATGAGGGACAGTAATGTTATTGAAACACTGCTTCTGTATTGTTTTTTTTTTCTTTGAGTAAACTCAGCTGTATACTTTCACAGCATTGTAACACAGCATATGAAAACAACTTTCTTTAATTCATTCATTTTATTTTCGGCTTAGTCCCTTCGTTAATCAGGGGTCGCCACAGCGGAATGAACTGTCAACTTATCCAGCATATGTTTTACGCAGCGTATGCCCTTTCAGCTGCAACCCATCACTGGGAAATGAAAACATCTTCACAAACAATATTATATACATCTCAAAAACTTTCTGAATATTTACAGACAATTTTCCTGCACAAAATTGTTGCACATTTAATATACAGTCATTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa12584

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000015007	Nonsense	671	756	10	11

Genomic Location (Zv9):

Chromosome 1 (position 49936394)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	1	48785575
GRCz11	1	49429995

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGACACGGGCTGATGATCGCAGAGYTGAAGGGTCACACYGGCACTATTTA[T/A]GCCCTCAAGTTCAGCAGAGATGGAGAAATCATTGCATCAGGTCAGGATTA

Long Flanking Sequence:

TGAATTAGCATGTTGCTAGCATGTTTCTAGTATAAACTATCATGTTGTTAGCATGAATTTAGTATGATCTAGCATGTATGATCAGTATGTTTCTGGTGTGGATTAGTGTATTGTTAGCATCAGTTAGTATGTGTACCATAATTATTTTGAATATTAGTTGTGGCCTTGACACAGTTTACATTACACATTTTCTTTAAATAATATTTGATTTCAGCTTTATTTGAATGTACCATCACTGATAAACTCCTCTTTTATTTGTCCATTCTTTATCATTTATTAACCAGACTGCCGCATACTCCATTTACCAGCCCATATAGAGAGTCATATACGAATAAAAGACAAGTGATGATGTTTGATTTTCAGGGGCCCATCCATTCTCTGGCGTTCTCCCCTAATGGGAAGTTCCTGGCCTCTGGATCCACCGACGGGAGAGTTTTGCTGTGGGATATTGGACACGGGCTGATGATCGCAGAGTTGAAGGGTCACACCGGCACTATTTA[T/A]GCCCTCAAGTTCAGCAGAGATGGAGAAATCATTGCATCAGGTCAGGATTAGCAACACATTAGGACTAGTTTTGATCTGACTGACTCTGTTTTCATGTTTGATACACAAATTATCCCCCAAGCTGTCAGTCATCCAAGCTCTGTCAAAAATCCTGTGAGTTTGAGTTCAAGATTTCATTTTCTCATTTTTTTTCTGTAAAGCCTTTACTGTTTTGAAGTAAACTTAAGGCAGCTTGGTTAACTTGATTATCCTTACAAACACAAACACAAAAATTATTTGCTCTAACAATTTTTAGATTTTTGGACTAGAAACAAGACAAATCAAAGCAAGAGAAGCCTTTTTTGCATTGCAATTATTTAATTTCTGTGCCTGAATACTGTTGGGACTCCCCAGAAAACCATTATATGCTATACAAACTATCTCCTGAAACTGTATTCTTATCGCAATATTTATCGCAGAAAACTAGATATCGCAATATTACACACACACACACAGCTGAA

Associated Phenotype:

Not determined