ZMP
zgc:153107
Ensembl ID:
ZFIN ID:
Description:
geranylgeranyl transferase type-2 subunit alpha [Source:RefSeq peptide;Acc:NP_001070131]
Human Orthologue:
RABGGTA
Human Description:
Rab geranylgeranyltransferase, alpha subunit [Source:HGNC Symbol;Acc:9795]
Mouse Orthologue:
Rabggta
Mouse Description:
Rab geranylgeranyl transferase, a subunit Gene [Source:MGI Symbol;Acc:MGI:1860443]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa12408 | Nonsense | Available for shipment | Available now |
sa24239 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa12408
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000099024 | Nonsense | 349 | 579 | 9 | 15 |
Genomic Location (Zv9):
Chromosome 23 (position 1739628)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 1707813 |
GRCz11 | 23 | 1716670 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTYTAACCAATAGAGANNGTGTGTGAGTTGTRTGTCTTGTKTTCAGGCTG[T/A]GCTGAAAGCTGGTGTMGAGACTCCGCCACTGATCAGGAGCTGTTCAGGTA
Long Flanking Sequence:
TAATTAGGCAAGTCATTGTATAACAGTGGTTTGTTCTGGAGACAATCCAACACTAATATTGCTAAAGGGGGCTAATAATATTGATGTTAAAATGGCTGTAAAACAATTAAAAACTGCTTTTATTCTAGCTGAAATACAACAAATTAGACTTTCTCCAGAAGAAATGATATTATAGGAAATACTGTAAAAAAATCTGAATTTGTTAAACAGTAGTTGCAGTTTTGCTGTAGTTTTATTTATTCACACTCGTACAGATCTTTAACGGTGTCTGTCAGCTGTGTGATCTTCCTGCCGGCTCCATCAGTGACACCAGTAATGAACACAACCTGACCATTCACTGGACAGACAAACACACACACAGAGACTGTGCTCTCTACACGGGTGAGACACACACACACACACACACACACACAAACAGACACGCTTACATACATACACACACACACACACTTCTAACCAATAGAGAGTGTGTGTGAGTTGTGTGTCTTGTTTTCAGGCTG[T/A]GCTGAAAGCTGGTGTAGAGACTCCGCCACTGATCAGGAGCTGTTCAGGTACTGCGGTAAAACTCAACTATTACTCTATATAAAGTGTTTATCTCTGTCATCTGAAGGTGAAGCGCTCTCCTTTTTAGATTGAGAAAGTGTGTGTGTGTGTGTTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAAACAGTTCACTGTTTCCACTCAATCATTCCATACAGTCCAAAGACATGCTGTACAGGTGAATGAGTATGTGTGGATGTTTCCCAGAGATGGGTTGCGGCTGGAAGGGCATCTGCTGCGTAAAAATGGATAAGTTGGCGGTTCATTCCACTGTGGCGACCTCGGATTAATAAAGGGACTAAGACAAAAAGAAAATGAATTAATGTGTATATATATATATATATATATATATCAATCTCTCTCTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24239
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000099024 | Essential Splice Site | 424 | 579 | 11 | 15 |
Genomic Location (Zv9):
Chromosome 23 (position 1742363)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 1710548 |
GRCz11 | 23 | 1719405 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCCTCTGGGCCATGAGAAAGAGACTCTGACCCATTTTCAAACCCTTAAA[G/A]TAAGACCACGAGAGCCTCGACACTGACCAATTACTATTGACTAATGCCCA
Long Flanking Sequence:
TGTGTATATCAATATCTGTGTTTGTTTGTGTGTGTATATATGCATGTGTCTGTTTTGTGTCTATCTGTGTGTGTGTTTCTCTGTATTTGTGTGCGTGTCTGTGTGTGTGTCTGTCTGATTGTTTCTCTATAGTGTGTGTGTATCAATATGTGTGTTTCTGTGTTTATATGTGCGTGTATATGTCTCTCTCAAATGTTTCTGTGTGCGTGCAGGAGTGAGCTGTCAGTAGAGAAGAGTTCAGTTCTTCAGGCTGAGCTTCAGTCCTGCAATCAGCTGCTGGATCTCGAACCTCAGAACAAATGTAAGTGTGTGTGTGTGTGTGTTGTGCATGCATACTTCACATAGCATTTGTGTCTTTGCAGCCAAACAAGAGTAAGTATTGTGACTGTGTGTGTGTGTGTGTGTTTTAAGGGTGTCTGCTGACCATCATCCTCCTGATGAGAGCTCTGGATCCTCTGGGCCATGAGAAAGAGACTCTGACCCATTTTCAAACCCTTAAA[G/A]TAAGACCACGAGAGCCTCGACACTGACCAATTACTATTGACTAATGCCCAAATATGTTCAATACCTCCTTTTTAATCTAAAACCAACAAAGGCTGCATCTAAAATCACCCACTCCTCGAGTAGGCACTACATTTTAGTGAATTCACTACTCATCCATCAGAAAAGTACATTCTGTATACAGTAGTATGAATGAGAGTAGTATGGATGGAATTCAGACGTACTACATCCGCCATTAGTCATTATCACGTGACCTACCCATGTCAGTTGCTTCATTCCCATTCATGAATTCTCTTGCATACTGTTTTAACATACTATATAGTTTGAAAGTGTGCAATGTTGGATGCGGTCGCTTTGTTTATACATTAATAACAACTGGAAAATGGAAAATAATCTACATACAAAAACAAACTTCATGAAAATAGCCCATAATGTTGGTAAAAGAAACCTCTTTAAATTCTCCAACCGGTGGGATCAGATTGTTTTTTTCCCCCAGTAGAATC
Associated Phenotype:
Not determined