Busch Lab

ZMP

zgc:153107

Ensembl ID:
ENSDARG00000061024
ZFIN ID:
ZDB-GENE-060929-1042
Description:
geranylgeranyl transferase type-2 subunit alpha [Source:RefSeq peptide;Acc:NP_001070131]
Human Orthologue:
RABGGTA
Human Description:
Rab geranylgeranyltransferase, alpha subunit [Source:HGNC Symbol;Acc:9795]
Mouse Orthologue:
Rabggta
Mouse Description:
Rab geranylgeranyl transferase, a subunit Gene [Source:MGI Symbol;Acc:MGI:1860443]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa12408 Nonsense Available for shipment Available now
sa24239 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa12408
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099024 Nonsense 349 579 9 15
Genomic Location (Zv9):
Chromosome 23 (position 1739628)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 1707813
GRCz11 23 1716670
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTYTAACCAATAGAGANNGTGTGTGAGTTGTRTGTCTTGTKTTCAGGCTG[T/A]GCTGAAAGCTGGTGTMGAGACTCCGCCACTGATCAGGAGCTGTTCAGGTA
Long Flanking Sequence:
TAATTAGGCAAGTCATTGTATAACAGTGGTTTGTTCTGGAGACAATCCAACACTAATATTGCTAAAGGGGGCTAATAATATTGATGTTAAAATGGCTGTAAAACAATTAAAAACTGCTTTTATTCTAGCTGAAATACAACAAATTAGACTTTCTCCAGAAGAAATGATATTATAGGAAATACTGTAAAAAAATCTGAATTTGTTAAACAGTAGTTGCAGTTTTGCTGTAGTTTTATTTATTCACACTCGTACAGATCTTTAACGGTGTCTGTCAGCTGTGTGATCTTCCTGCCGGCTCCATCAGTGACACCAGTAATGAACACAACCTGACCATTCACTGGACAGACAAACACACACACAGAGACTGTGCTCTCTACACGGGTGAGACACACACACACACACACACACACACAAACAGACACGCTTACATACATACACACACACACACACTTCTAACCAATAGAGAGTGTGTGTGAGTTGTGTGTCTTGTTTTCAGGCTG[T/A]GCTGAAAGCTGGTGTAGAGACTCCGCCACTGATCAGGAGCTGTTCAGGTACTGCGGTAAAACTCAACTATTACTCTATATAAAGTGTTTATCTCTGTCATCTGAAGGTGAAGCGCTCTCCTTTTTAGATTGAGAAAGTGTGTGTGTGTGTGTTGTGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACAAACAGTTCACTGTTTCCACTCAATCATTCCATACAGTCCAAAGACATGCTGTACAGGTGAATGAGTATGTGTGGATGTTTCCCAGAGATGGGTTGCGGCTGGAAGGGCATCTGCTGCGTAAAAATGGATAAGTTGGCGGTTCATTCCACTGTGGCGACCTCGGATTAATAAAGGGACTAAGACAAAAAGAAAATGAATTAATGTGTATATATATATATATATATATATATCAATCTCTCTCTCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24239
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000099024 Essential Splice Site 424 579 11 15
Genomic Location (Zv9):
Chromosome 23 (position 1742363)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 1710548
GRCz11 23 1719405
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCCTCTGGGCCATGAGAAAGAGACTCTGACCCATTTTCAAACCCTTAAA[G/A]TAAGACCACGAGAGCCTCGACACTGACCAATTACTATTGACTAATGCCCA
Long Flanking Sequence:
TGTGTATATCAATATCTGTGTTTGTTTGTGTGTGTATATATGCATGTGTCTGTTTTGTGTCTATCTGTGTGTGTGTTTCTCTGTATTTGTGTGCGTGTCTGTGTGTGTGTCTGTCTGATTGTTTCTCTATAGTGTGTGTGTATCAATATGTGTGTTTCTGTGTTTATATGTGCGTGTATATGTCTCTCTCAAATGTTTCTGTGTGCGTGCAGGAGTGAGCTGTCAGTAGAGAAGAGTTCAGTTCTTCAGGCTGAGCTTCAGTCCTGCAATCAGCTGCTGGATCTCGAACCTCAGAACAAATGTAAGTGTGTGTGTGTGTGTGTTGTGCATGCATACTTCACATAGCATTTGTGTCTTTGCAGCCAAACAAGAGTAAGTATTGTGACTGTGTGTGTGTGTGTGTGTTTTAAGGGTGTCTGCTGACCATCATCCTCCTGATGAGAGCTCTGGATCCTCTGGGCCATGAGAAAGAGACTCTGACCCATTTTCAAACCCTTAAA[G/A]TAAGACCACGAGAGCCTCGACACTGACCAATTACTATTGACTAATGCCCAAATATGTTCAATACCTCCTTTTTAATCTAAAACCAACAAAGGCTGCATCTAAAATCACCCACTCCTCGAGTAGGCACTACATTTTAGTGAATTCACTACTCATCCATCAGAAAAGTACATTCTGTATACAGTAGTATGAATGAGAGTAGTATGGATGGAATTCAGACGTACTACATCCGCCATTAGTCATTATCACGTGACCTACCCATGTCAGTTGCTTCATTCCCATTCATGAATTCTCTTGCATACTGTTTTAACATACTATATAGTTTGAAAGTGTGCAATGTTGGATGCGGTCGCTTTGTTTATACATTAATAACAACTGGAAAATGGAAAATAATCTACATACAAAAACAAACTTCATGAAAATAGCCCATAATGTTGGTAAAAGAAACCTCTTTAAATTCTCCAACCGGTGGGATCAGATTGTTTTTTTCCCCCAGTAGAATC
Associated Phenotype:
Not determined