ZMP
sc:d411
Ensembl ID:
ZFIN ID:
Description:
semaphorin-4C [Source:RefSeq peptide;Acc:NP_001121718]
Human Orthologue:
SEMA4C
Human Description:
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (se
Mouse Orthologue:
Sema4c
Mouse Description:
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (se
Alleles
There are 8 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa33554 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa12361 | Nonsense | Available for shipment | Available now |
| sa30613 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa20362 | Nonsense | Available for shipment | Available now |
| sa20361 | Nonsense | Available for shipment | Available now |
| sa25291 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa33553 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa33554
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113037 | Nonsense | 49 | 863 | 2 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 16268797)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 14064665 |
| GRCz11 | 5 | 14564882 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTTCAGATGTGCATGACAGTATGGCGAGGTTTCGTGCTGTCGGGGTGTG[G/A]AACTACACCATGTTGACCCTGGCAGAACACGAGAGGGTTTTGTATGTGGG
Long Flanking Sequence:
CTTCATTCATACATATAAGGTTAAAACATAGCAAATGGCAGAATATTTATTCATTCATGATTATTATTAGTTTGTACACTTGTAAAAAGTTATTCAACGCTTCAGTCTGGATTCCTGTATATAAGATTGTTTTGTTCATATTAATCATGAATTAATTTCTGTGTCATGACTCATAATGTAATGCTCCTTGATACCAAACTTTTCCCAACCAGCCTGGATTATGTAAAGTAATATTAGCCCAAATTAATCTTTTTAACACATCGCCAACCAGTTCAAACCAAGGTTATGAGTATCCATGGAAATTCATGCTCGCCTAAGTTGGCATTTTCAGCGAGGACGTCTGTGAATGTGATAAATGTGAGAGGAATTTTTTTAAAGCCTGAGAGTCATACTGGATCAGTGACATTTGGATCACATTTAGTACCCTTAAAAAAACATTTCTTTCCTTTCTCTTCAGATGTGCATGACAGTATGGCGAGGTTTCGTGCTGTCGGGGTGTG[G/A]AACTACACCATGTTGACCCTGGCAGAACACGAGAGGGTTTTGTATGTGGGCGCCAGAGAGAACATCTTCGCCCTGGATCCCAACGACATCAGCAGACAGCTCCGACCACAGGTATGTTCAGACAAGAAAAGGCCTTTTTTCTAGTATTGACATTCAAATGGCTTCCATTTATGGGTTCCGCCATATAACGGTATTGACGATAATCGTGAAATGTAAGAAATTAAACATTAATATTTATTTAGGATGTTATAATATATTGATAAGGCAGCACATGGCTCAGTGGTTAGCACTGTCACCTAACAACACTGACATTCGAGTCCCAGCTGGGCCAGTTAGCATTTCTGTGTGGAGTTTGCATGTTCCCCCTGTGTTCGCATGGGTATCCTCTGGGTGCTCCGGTTTCCCCCACAGTCCAAAGACATGCGCTATAGATGAACTGGATGAAATGATTTGGCCATAGTGCATAAGTTTGTGAGTGAATGAGTGTTTCCCAGTACTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12361
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113037 | Nonsense | 126 | 863 | 4 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 16264935)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 14060803 |
| GRCz11 | 5 | 14561020 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGCTTCAACTACATTCGCTTCCTGCAGAGCTACAATCACACGCACCTGTA[T/A]ACATGCGGGACGTACGCCTTCCAGCCYAAAKGCACCTACATTGTGAGTGC
Long Flanking Sequence:
GGGGAAAATCTGATATTGTGACAGGCCTACTCCCACGCAACCAATAAATACTAAACCGCAAGCCATCAAGCAAAAAGGCCATTAGCATTTTATCATTCAAAAATATCAGCATTTAAAAATGACTCACTTTTTCAATGCCACAGCCATTTGTAGTAAATTGCCAGTTGCGGCAGTCAATAGCGAGTGCATGTTTTACATGCAGAGTGCTGTTTGCTCGTAAAAGTCATGTCTCTTTCTCTCTTAGATTGAGTGGTCTGCTCCTGCAGAAAAGAAAAAAGAGTGTGCAGCGAAGGGGAAGAATAACCAGGTACCGGCTGATGTTGCATCCTTTATGTTTTAACAGCTTTATTTTGTCTGCCTTCACCGAAATGCATTTACTCTCCCTCCATCTCACCTATTTTCTCTTTGTGTGTCTCTCTCTCTCTGTCGTCGACGTCTTTGCAGACTGAGTGCTTCAACTACATTCGCTTCCTGCAGAGCTACAATCACACGCACCTGTA[T/A]ACATGCGGGACGTACGCCTTCCAGCCCAAATGCACCTACATTGTGAGTGCGCACTCTTGTCTTTGCCTCAGAAATCCGTCAGACCCACATGATAAAGTGGAGTGGGCTGTGATATGATGGAGAAACTAAGTGTGTGTGTGTATCTGTGTGGCATCCAGTGTGTCAAAGAGAAATATATCAAATGGAAATGAGGTTGGGTTGTCACGCGGTGTGAACCGATGTGATAAAACAGCATCAAGTGGCTTGTGTGCTGTGGTACATGCGCTTGTTTATTTGCTTATTCATATTTTATACTGTATTATATATCATATTTATTCACTAACTGGTCATCTTATTTGCTAGTCCCAGTTTATCCATATTTTGTCTTGAAGGAACGCTGCACTTTTTTGGAAATTACTAATTTTACAACTCTCCTAGAGTTAAACAGTTCAGTTTTACCATTTTTTAATCCATTTAGCTGATCTTCAGGTCTGGCAGGAGCACTTTTAAGTTAGCTTAGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30613
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113037 | Nonsense | 188 | 863 | 6 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 16258124)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 14053992 |
| GRCz11 | 5 | 14554209 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTAGACAAAGAGTTGTACTCCGCCACCCTCAATAACTTTCTGGGCACC[G/T]AGCCCGTAATCCTGAGGAACCTGGGACAACAGCATTACAGCATGAAGAGT
Long Flanking Sequence:
GCTGATGCTCTCCTCTAGTTGGCAAACACGGCCGGTGGCACAGTGTGTATGTAGGGTCATGCGTTTGTATGTGTGTGTGTGTGTGCTCAGCTCATTGCGGGACCGTTTCTGTCTTCCGTCTGATAGAATGCAGATCATTTCACTCTGGATAGCGCCGCCCTGGAGGACGGCAAGGGAAAGTGCCCTTACGACCCCGCCAAAGGTCATACAGGCCTCATTGTGGGTGAGTGCATGCATTTCCCTTGATCACAAACCTGCATTATTATTCCGGTGTCTTGTGTGTGGGTGTTCTTTTGTGTTCAGCGGAGCCCGTGGATGCGTTTATGCCTCCTCTCTTCCCACACTTGGGAGCGAACAGAGTCCCTCTTTAATATCTCATACTGTATGCTGTAGACAGGAGAGAGTGTGTGTGTACGTGTGTGTTTGTTCCCTGCTCTAAGCGTTCTTCTTTTCTAGACAAAGAGTTGTACTCCGCCACCCTCAATAACTTTCTGGGCACC[G/T]AGCCCGTAATCCTGAGGAACCTGGGACAACAGCATTACAGCATGAAGAGTGAATACCTGCCGGCCTGGCTCAACGGTGAGGATCAAAACACACACATAAGCAAAATATACTGTATGTGGTGCTGCTGAACCAGCTTCTGTTACGCTGGTGGCCATGACTAACCAGCTGATATAATATAATAGAAATTTTAGATTTCTTGGCTTTTATTGGTATTAAATTTGTAGGTATTTGTTGCTGATTTGTACTTTGGGAAAATATGTTAACTAACAGTTTTCATATTTTGACTTTCGTGTTTTTATTTTTACCCCTTTATTCATACTTTTGAATGCATTATGGGACGCTGATCTTTCTCTCAACAACTTTTAACCTTGAAAAGTTTTTATTGACATTTTTAATAGTTTAAAGTGATATATTGTCTGTGTTGGTGTTGTATATTACTGTACAAAAACCTTGTAATAAGCTGCCAGTACATTTTCTGTTATTTTGCATACTTATATGTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20362
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113037 | Nonsense | 200 | 863 | 6 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 16258086)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 14053954 |
| GRCz11 | 5 | 14554171 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCTGGGCACCGAGCCCGTAATCCTGAGGAACCTGGGACAACAGCATTA[C/A]AGCATGAAGAGTGAATACCTGCCGGCCTGGCTCAACGGTGAGGATCAAAA
Long Flanking Sequence:
CACAGTGTGTATGTAGGGTCATGCGTTTGTATGTGTGTGTGTGTGTGCTCAGCTCATTGCGGGACCGTTTCTGTCTTCCGTCTGATAGAATGCAGATCATTTCACTCTGGATAGCGCCGCCCTGGAGGACGGCAAGGGAAAGTGCCCTTACGACCCCGCCAAAGGTCATACAGGCCTCATTGTGGGTGAGTGCATGCATTTCCCTTGATCACAAACCTGCATTATTATTCCGGTGTCTTGTGTGTGGGTGTTCTTTTGTGTTCAGCGGAGCCCGTGGATGCGTTTATGCCTCCTCTCTTCCCACACTTGGGAGCGAACAGAGTCCCTCTTTAATATCTCATACTGTATGCTGTAGACAGGAGAGAGTGTGTGTGTACGTGTGTGTTTGTTCCCTGCTCTAAGCGTTCTTCTTTTCTAGACAAAGAGTTGTACTCCGCCACCCTCAATAACTTTCTGGGCACCGAGCCCGTAATCCTGAGGAACCTGGGACAACAGCATTA[C/A]AGCATGAAGAGTGAATACCTGCCGGCCTGGCTCAACGGTGAGGATCAAAACACACACATAAGCAAAATATACTGTATGTGGTGCTGCTGAACCAGCTTCTGTTACGCTGGTGGCCATGACTAACCAGCTGATATAATATAATAGAAATTTTAGATTTCTTGGCTTTTATTGGTATTAAATTTGTAGGTATTTGTTGCTGATTTGTACTTTGGGAAAATATGTTAACTAACAGTTTTCATATTTTGACTTTCGTGTTTTTATTTTTACCCCTTTATTCATACTTTTGAATGCATTATGGGACGCTGATCTTTCTCTCAACAACTTTTAACCTTGAAAAGTTTTTATTGACATTTTTAATAGTTTAAAGTGATATATTGTCTGTGTTGGTGTTGTATATTACTGTACAAAAACCTTGTAATAAGCTGCCAGTACATTTTCTGTTATTTTGCATACTTATATGTTATTTCTTAAGCATTATATTATTTAAAACTACTTAAATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20361
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113037 | Nonsense | 206 | 863 | 6 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 16258068)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 14053936 |
| GRCz11 | 5 | 14554153 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTAATCCTGAGGAACCTGGGACAACAGCATTACAGCATGAAGAGTGAATA[C/A]CTGCCGGCCTGGCTCAACGGTGAGGATCAAAACACACACATAAGCAAAAT
Long Flanking Sequence:
TCATGCGTTTGTATGTGTGTGTGTGTGTGCTCAGCTCATTGCGGGACCGTTTCTGTCTTCCGTCTGATAGAATGCAGATCATTTCACTCTGGATAGCGCCGCCCTGGAGGACGGCAAGGGAAAGTGCCCTTACGACCCCGCCAAAGGTCATACAGGCCTCATTGTGGGTGAGTGCATGCATTTCCCTTGATCACAAACCTGCATTATTATTCCGGTGTCTTGTGTGTGGGTGTTCTTTTGTGTTCAGCGGAGCCCGTGGATGCGTTTATGCCTCCTCTCTTCCCACACTTGGGAGCGAACAGAGTCCCTCTTTAATATCTCATACTGTATGCTGTAGACAGGAGAGAGTGTGTGTGTACGTGTGTGTTTGTTCCCTGCTCTAAGCGTTCTTCTTTTCTAGACAAAGAGTTGTACTCCGCCACCCTCAATAACTTTCTGGGCACCGAGCCCGTAATCCTGAGGAACCTGGGACAACAGCATTACAGCATGAAGAGTGAATA[C/A]CTGCCGGCCTGGCTCAACGGTGAGGATCAAAACACACACATAAGCAAAATATACTGTATGTGGTGCTGCTGAACCAGCTTCTGTTACGCTGGTGGCCATGACTAACCAGCTGATATAATATAATAGAAATTTTAGATTTCTTGGCTTTTATTGGTATTAAATTTGTAGGTATTTGTTGCTGATTTGTACTTTGGGAAAATATGTTAACTAACAGTTTTCATATTTTGACTTTCGTGTTTTTATTTTTACCCCTTTATTCATACTTTTGAATGCATTATGGGACGCTGATCTTTCTCTCAACAACTTTTAACCTTGAAAAGTTTTTATTGACATTTTTAATAGTTTAAAGTGATATATTGTCTGTGTTGGTGTTGTATATTACTGTACAAAAACCTTGTAATAAGCTGCCAGTACATTTTCTGTTATTTTGCATACTTATATGTTATTTCTTAAGCATTATATTATTTAAAACTACTTAAATGTCAATAAAAGTCACTTTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa25291
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113037 | Essential Splice Site | 213 | 863 | 6 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 16258047)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 14053915 |
| GRCz11 | 5 | 14554132 |
KASP Assay ID:
554-7660.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAACAGCATTACAGCATGAAGAGTGAATACCTGCCGGCCTGGCTCAACGG[T/C]GAGGATCAAAACACACACATAAGCAAAATATACTGTATGTGGTGCTGCTG
Long Flanking Sequence:
TGTGTGTGCTCAGCTCATTGCGGGACCGTTTCTGTCTTCCGTCTGATAGAATGCAGATCATTTCACTCTGGATAGCGCCGCCCTGGAGGACGGCAAGGGAAAGTGCCCTTACGACCCCGCCAAAGGTCATACAGGCCTCATTGTGGGTGAGTGCATGCATTTCCCTTGATCACAAACCTGCATTATTATTCCGGTGTCTTGTGTGTGGGTGTTCTTTTGTGTTCAGCGGAGCCCGTGGATGCGTTTATGCCTCCTCTCTTCCCACACTTGGGAGCGAACAGAGTCCCTCTTTAATATCTCATACTGTATGCTGTAGACAGGAGAGAGTGTGTGTGTACGTGTGTGTTTGTTCCCTGCTCTAAGCGTTCTTCTTTTCTAGACAAAGAGTTGTACTCCGCCACCCTCAATAACTTTCTGGGCACCGAGCCCGTAATCCTGAGGAACCTGGGACAACAGCATTACAGCATGAAGAGTGAATACCTGCCGGCCTGGCTCAACGG[T/C]GAGGATCAAAACACACACATAAGCAAAATATACTGTATGTGGTGCTGCTGAACCAGCTTCTGTTACGCTGGTGGCCATGACTAACCAGCTGATATAATATAATAGAAATTTTAGATTTCTTGGCTTTTATTGGTATTAAATTTGTAGGTATTTGTTGCTGATTTGTACTTTGGGAAAATATGTTAACTAACAGTTTTCATATTTTGACTTTCGTGTTTTTATTTTTACCCCTTTATTCATACTTTTGAATGCATTATGGGACGCTGATCTTTCTCTCAACAACTTTTAACCTTGAAAAGTTTTTATTGACATTTTTAATAGTTTAAAGTGATATATTGTCTGTGTTGGTGTTGTATATTACTGTACAAAAACCTTGTAATAAGCTGCCAGTACATTTTCTGTTATTTTGCATACTTATATGTTATTTCTTAAGCATTATATTATTTAAAACTACTTAAATGTCAATAAAAGTCACTTTGTTAAACAGTAGAGTTGAATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33553
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000113037 | Nonsense | 367 | 863 | 9 | 14 |
Genomic Location (Zv9):
Chromosome 5 (position 16242683)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 14038551 |
| GRCz11 | 5 | 14538768 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGGAGTCGTCTCAGCGATGGGGCCGTTACACTGGCACTGTGCCCAGTCCA[C/T]GACCTGGAGCGGTGAGCAGAGCGGCCGTTCAGATGGGAGGCCAGCCGAGA
Long Flanking Sequence:
CACCTTGGCCTGGTCACCACTGTAGTAACTGCTGGTGACTTGTTGCACTGTTTGGTTGCCAGACACACTCATTGCTCTAGACTGGGGGTGGTCATAAAGTTATTCTCGATCCGTTTATTTCTCTCTCTTCCTTTTCCCACATAGTTGTGAAAGTCGCTCTGTCCTCTGCTTATATTCAAGAGTCGCCGTGCCAAACATCCAGCCGTGTTCCTCAAGTGTAGAAAATGCTGCACTGTCATTATGTTGACAGTAAAGGCTATTACTGTAATAAACCAGCCAATGTAGTGCAGTCATTTAGTTCAGACTGACAAACTGCTTTCTCCACTTTCTCTCCCATTTTGTTTCTTCATCCTTTATTGCCTCTCAGGGGGGACGTGGATGTGTCTGCTGTGTGTCAGTACCAGATCGGGGAGGTGAAAAATGTGTTCGACGGGCCGTATAAAGAATACAGGGAGTCGTCTCAGCGATGGGGCCGTTACACTGGCACTGTGCCCAGTCCA[C/T]GACCTGGAGCGGTGAGCAGAGCGGCCGTTCAGATGGGAGGCCAGCCGAGAGGGCAGCCGTGACTAAGCAGAAGGCTAAAAATAGCTCAAGATTTTTGTATATACAGTAATATTTCACTTCTAAAGCAGAACTTTAGAAGAGTACGATTAATAAGTGTCCTGTTAGATTACAGTGTTCTGAATTAAGGATACAAGTAAGATTATATCTAAGATGTTTTCAGTAAATGTTTTGAAATATATTTTAAAAATATTTATTTTTGTGTCGTTTTGCACTCAAAAAATAACTTTTGCTGCTTGTTTAAAGTACTTATTTAAAATTTGAGTCAAAACAACACAGTTCTTTAAGCTTTTTGGGAAAATTTAATTTGTTTATGTTAAGTCCGCATAAATTAGCAAAAAATGATTGAGTTAACTTTGTGTTGAAGGAATTTTCACATTTTCTACAGTGTGAGAAATTATTTTAGTAATTACTTTGTGATGAAGAATGTATTGGGCAACTCA
Associated Phenotype:
Not determined