ZMP
irx4b
Ensembl ID:
ZFIN ID:
Description:
iroquois homeobox protein 4b [Source:RefSeq peptide;Acc:NP_001018329]
Human Orthologue:
IRX4
Human Description:
iroquois homeobox 4 [Source:HGNC Symbol;Acc:6129]
Mouse Orthologue:
Irx4
Mouse Description:
Iroquois related homeobox 4 (Drosophila) Gene [Source:MGI Symbol;Acc:MGI:1355275]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa12344 | Essential Splice Site | Available for shipment | Available now |
sa73 | Nonsense | Available for shipment | Available now |
sa23541 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa12344
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052338 | Essential Splice Site | 95 | 439 | 2 | 6 |
ENSDART00000133354 | Essential Splice Site | 95 | 439 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 19 (position 28743575)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 28673687 |
GRCz11 | 19 | 28257910 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
YGACTCCTGCAGCACTTACGGTCCAGATTCAGCCGCATGCTATCCTCTGG[T/G]AAACATTSCTTTTGTTTGTTTTATTGCTGTTCAATGATTACCTTTTGTAC
Long Flanking Sequence:
ATTTAATGCACTCTTTAAATAAAGAATCACCTAATTAGAGTCTAAGATAAAACCAATTTGTAAAATGTATTATGATGTATACAAACTCTTAGCTTGTGACTAATTTCTTACAGAGCTTTAACCATAATTGTGGATAGCCCTGGAGACTAATGCTCGTTTAAGTCATTAATAGTTTAAATGCTCAAAAAGCTGTCTCACTGTAAAGTCTTCCATGGTTTTCAAGGACATGCTTTAAACTATTTATCCTTTTCTTTGGCAGCTTTTAATGTCTTCTAATGCTCTGAGCACCTGCTTTGAGTCTAGTGGTTCTCTGCTAGACTCTGGAGTGCCGACTTCTCCTCAAAACTCACTTTACTGCCCCGTGTACGAAAGTAGGCTTGTGGCCTCCAGCCGGCATGAGCTGATCCCTACTGCGGTCTATGGCAACTCCTGTTCAAAAAATCATGTTTACGACTCCTGCAGCACTTACGGTCCAGATTCAGCCGCATGCTATCCTCTGG[T/G]AAACATTCCTTTTGTTTGTTTTATTGCTGTTCAATGATTACCTTTTGTACAATGATTATTGTTTATATATATAGTATATATAGTATTATATATAGTATAAAGTATAGTATATATATAGTATATAGTATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGGTTGCATATTTATTACTTTTTTATAATATATATACAACACATACAGTTAAATACAAACTTATTAGCACTCCTATTAAATGCTTAATCTTTTTAAAATATTTGCAAAGTGGAGTTTAACAGATCAAGGACATTTACACAGTATTTCCTATAATATTTTTTCTTCTGGAGAAAGTCTTATTTCTTTTAGTTTGGCTGGAATATAAGCAGTTTATATATATATATATATATATATATTTTTTTTTTTTTCTTTTTTTTTTATGGTCAGTATTACTTGCCCCATAAGCATTTTTATATATGTTTATATGTTTGCATATTTTTTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa73
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052338 | Nonsense | 129 | 439 | 3 | 6 |
ENSDART00000133354 | Nonsense | 129 | 439 | 3 | 5 |
Genomic Location (Zv9):
Chromosome 19 (position 28744621)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 28674733 |
GRCz11 | 19 | 28258956 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAAGCTCTGCATATTATCCCTACGACTACCCAATTGGACAATACTCATA[T/A]GATCGATATGGGTAAGAACTGCAACCTTTTTTTTTTATTTTTTTTTTACA
Long Flanking Sequence:
TTTACATAATAGCATAGTTAAGCCTTTAAATTGCACTTTAAGCTTAATGCTAGTATCTTGGAAAATAAATAGAAAAATATTATGCACTGTCACTATAGCAATGGCAAAAGAAATTAGTCATTATTAGTTAGTTATTAAAAGTATTATGTTGAAAAATGTTTGTTCAATGTGTTTGTCTTTATTAAACAATATCTGAAAATATTTTAAATTTAATTTTGACTTTAACTGTATATGTATGTGGGTATTTTTATACCTAATAAATATACACAGTACACATAAATTAATGGTTAATCACGTTGAATCATTTGGCAGTAGTTCATGTCACAATTAAAGTAATATATCTATAAAATTTCCACTCAATGATGTACATACCTTGCTTTATTTTATGCTTTATATTAGGGTAAACTCAATGAGAAAGATGGAGTGCAAACTGGACATTCAAGAGTTACCCAAAGCTCTGCATATTATCCCTACGACTACCCAATTGGACAATACTCATA[T/A]GATCGATATGGGTAAGAACTGCAACCTTTTTTTTTTATTTTTTTTTTACATTTTTGGCTTTAATGATAGTATAAAAAGTTGTATTTGAGCATTTTCCATGTTGTTTAGATATGGATCTGTAGATGTGGGGACAAGAAGAAAGAATGCCACCAGAGAGACCACCAGCACATTGAAAGCATGGTTGCAGGAACATAAAAAGAATCCGTATCCTACAAAGGGTGAGAAGATCATGTTGGCTATCATCACTAAGATGACCCTTACGCAGGTCTCCACCTGGTTTGCCAACGCACGCCGGAGACTCAAGAAGGAGAATAAGATGACGTGGTCACCACGTAACAAGAACTCAGATGAGAAGGAGTGTGACGACGACCAAGAAGATCTGGATGAAGCGCAGGAGGAGCCAATAAAAACTGAACAAGATTTCAATGGTTTGTTCAAAGATTTTTTTATCAGTTTGGTTTAAAATGCAAATATCATTCCTTTAGCCTAGTCAGCATAGA
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa23541
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000052338 | Nonsense | 262 | 439 | 5 | 6 |
ENSDART00000133354 | Nonsense | 262 | 439 | 5 | 5 |
Genomic Location (Zv9):
Chromosome 19 (position 28746797)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 28676909 |
GRCz11 | 19 | 28261132 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGATACAGATCAACTTCACAGCGATCTGGATGATTTCGATCTAGTGGAAT[C/A]GGATGGCTCTGAGTGCGAATCGAAACCATCTTTTGTTGTGCACGTTCACT
Long Flanking Sequence:
CTCTTTTCCAGTCAATGATGCATTAAACAAATTTTATACAACGTTAAAGATAACGCTGAAAATGCTTGCAATGTCAGTGTGCCAAGCAGATTAATTCAAGTTTAGTGTAGCACCGGATCATGTTTATTTTCTTTTCCATTCATTCATTTTCTCTTGGGCTTAGTCCCTTTATTAATCTGGGGTCGCAACAGCGGAATGAACTGCCAACTTATCCAGCATATGTTTTATGCAGCGGATGCCCTTCCAGCTGCAACCCATCACTGGGAAATAGTTTCTTATTATAAGTAATTCTAAGTACATAAGTTCAAGCATGAGCAAAATAGTTCTGGCTATTCTCCTAACAGCCACAAGGGTTTCTAAACAGTACATATAGAGCATTTAGTGTCATACTTACCATTTTATAACCTGTCTATAAATTTGTTTCATAACTCCAGACAACCATGGAAAGGACGATACAGATCAACTTCACAGCGATCTGGATGATTTCGATCTAGTGGAAT[C/A]GGATGGCTCTGAGTGCGAATCGAAACCATCTTTTGTTGTGCACGTTCACTCAGAAACCAGCGACCACCCAGAAACCCACTTTAAAGATGCTTTTCATGAATCCGTTACCGAGCTTACAAGAGGTGTCCACAAATTTAGCGAAGACCGTCTGAGAGCACCTGCTGAGGATCACCAAATGGCAAAGTTTTACCTTCAACAAGGCCAAAAGACCATTGAGACCAAGCCGAAAATCTGGTCGCTTGCACAGACCGCTACATCGTTAAACCAAGTCGATTATTCATCATGCATGCATAAACGAACAGCCTGCCCTTCTTCAAACTGTGACTCCGATTCAGAAATGACAAAGAGGAAACAAGAGTCTCCAGTAGCTACTCTGAGGAACTGGGTGGATGGAGTGTTTCACGATCCCCTATTCAGGCACAACAACCTAAACCAAACTTTCAGCAACTCCACAGAGTTATGGACTGATGCCATTTCCTCACAGAATAACTACCATGAAC
Associated Phenotype:
Not determined