ZMP

smyd5

Ensembl ID:

ENSDARG00000071669

ZFIN ID:

ZDB-GENE-040912-39

Description:

SET and MYND domain-containing protein 5 [Source:RefSeq peptide;Acc:NP_001004614]

Human Orthologue:

SMYD5

Human Description:

SMYD family member 5 [Source:HGNC Symbol;Acc:16258]

Mouse Orthologue:

Smyd5

Mouse Description:

SET and MYND domain containing 5 Gene [Source:MGI Symbol;Acc:MGI:108048]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa12338	Nonsense	Available for shipment	Available now
sa42390	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa12338

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000021657	Nonsense	288	415	9	13
ENSDART00000124042	None	326	453	9	13

Genomic Location (Zv9):

Chromosome 14 (position 23516716)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	22216506
GRCz11	14	22513751

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

YTTCCCCGCCAGCAGAGGGAGCAACTGGATGCGTTTATCGACCAGCTTTA[C/A]AAGGACAYCGACAAAGGTCATTTTTCTCATAGACTCCCACCTGTTTACAG

Long Flanking Sequence:

TATATCATTTCACCAGATTAATTTATCAGCTTTCGTTATTTGGAAAGGTTTCATTCATTTAGATTGACTGGGATGATCAAGTCTTTTTCATCCAGTGGTTTTGCATAAATTACAAACATGTATAAATACAACAGAGCAGAGATAAAAGGTAAATAAACATTGCATTAGGATTTTCGGTTGAGTCTAAAAGTATTCAGGTACAGAAATTTAACAATTCAACATAAAATAACATGGTCATCAATGTAATAAAATTATATTTTTATTTTTTAAATATTTAATAAATGATTTAATCCTGTGATGTGACTATTGCACTCATTGCGATGTCAATGCTAAACAATATATTGTGCAGCCCTACTTAGTAATATGAATTCCTCAAGTAAGTAACTGCTGTAATGCTTGTCTGTCTGTAGTTCTCTGAGTCAGTGGGTTCATGCCTGTGATGCGCTGGAGCTTCCCCGCCAGCAGAGGGAGCAACTGGATGCGTTTATCGACCAGCTTTA[C/A]AAGGACATCGACAAAGGTCATTTTTCTCATAGACTCCCACCTGTTTACAGAGCGTAGACCCTCACACTTGCTCACACATTGATCTGTATACCTGCAAAGACTGAATCCATCTCTGCGTTTGACATCTCCTTCCTCAAGCGCAGCGGAGACAGAGACACACATTTTACCACTTAGATGGCCATCGATCTGTGTAAAATATTATTGTTTTGTGCAGGAGTGTGAAATAAATACAACAGATGAAAGCCTTTCATAGATCTTTCTCTTACTTTTTCTGTTATAGGATGTGTTAAAATAGAAAGTTAATATTATACAAAATTAAAAACAAATATATTAATAACAAATATATTTTTATTTAGAAAAATTAAGGCACTTTTAATCTGGTTTATATATATATATATATATATATATATATATATATATATATATAACAAATTTAACCTTATATATATTTACTTTGTAATAAAGTGTAAAATACATCCAAAGAGATCAAAATCTTTCAT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa42390

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000021657	Essential Splice Site	368	415	12	13
ENSDART00000124042	Essential Splice Site	406	453	12	13

Genomic Location (Zv9):

Chromosome 14 (position 23521921)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	14	22221711
GRCz11	14	22518956

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ACTGCTGTCAGCGAGACAGGAGTCGTCATAGCCGGCACAAGATCTTGAGG[T/C]AAACCATTGCAATCTCTTGTTTAAGCATTCTCTGTGAAACTGGCCAGCTG

Long Flanking Sequence:

TGCATGAATAATGTTTTAGTTTTGGATTAATTTCTTGCATTAATGTTTAGTAAATATTCTGTAAGTTAAAAGTGTTTCCAGTTAAAACCTAAAATGGTTACAAGTCTAAAATGTATGGAAATAATCCTTAAAAGATCTTAAAAGGTATTGAATTTCACATTCTGATTCCTGTATATACTCTGCATTGGGTCCATTGTTTTCGTTTACATTAATCAAAATGTTCTATAGGGAGATTTTGGAGGGAAAATGTAATGTTTACTGAGTTTGAGAAAAAGTTTGTACTTTGCATTGAATACAACATTACTAAAAGTAAATGAATATGCTGGCCAATAAAAAACAGAAAACATTTCATAAATTTTGATTATAACATTTCTGTATAACTAAACTGCGCCGTTGATTGTCATAAATTTCTCTTTTTTTTTCTGTAGGAAATTTGCATCAGCTACCTGGACTGCTGTCAGCGAGACAGGAGTCGTCATAGCCGGCACAAGATCTTGAGG[T/C]AAACCATTGCAATCTCTTGTTTAAGCATTCTCTGTGAAACTGGCCAGCTGAGTCTACCTCCAGAGAGGATCAATGGCCTTAGTCCCTGGCAGCAGCTTTCTGGCCTGGAAGAACCACAGGGGCCACTGCTCCTGCTCTCCTATTGATCATTTACCTGTCAATCGTCTCCATGGCCAATCAGGGGCTGTTCAGAAATCCCACTTAATCTATATTCACTTTATTCCTGACTTCACCTTGAAAAGAACTGCTGACCTTCTTGCCTATGAAGTCGAGATCAGAGACTGATCCCCTTGGAATTGATGGATATTATTTATCTTCATTTGTTATGGAGTAAGGGTTGATTGGATGACATAATGGCAGATCTTTACTGGTTCGTTGGTGTTGGGAGGTGTATATACTGTAGTTATTATTTGAAGTGGATCATAGAAGAAAAGGCGTTATTCAGTAACATTTGTTTTATTGATAACTTTGTTGAAAGCTTTTGATACAATTGAAAGTTG

Associated Phenotype:

Not determined