ZMP
cnn1b
Ensembl ID:
ZFIN ID:
Human Orthologue:
CNN1
Human Description:
calponin 1, basic, smooth muscle [Source:HGNC Symbol;Acc:2155]
Mouse Orthologue:
Cnn1
Mouse Description:
calponin 1 Gene [Source:MGI Symbol;Acc:MGI:104979]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa1227 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa1227
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000133772 | Essential Splice Site | 218 | 296 | 7 | 7 |
| ENSDART00000141018 | Essential Splice Site | 199 | 277 | 6 | 6 |
Genomic Location (Zv9):
Chromosome 3 (position 13617817)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 14336807 |
| GRCz11 | 3 | 14486607 |
KASP Assay ID:
554-1136.1 (used for ordering genotyping assays)
KASP Sequence:
CTTGCTTTAAATGCCATGCATAAATTATTTCACTTCCTCTTCTTTCTATC[A/T]GGCTGGTATGACAGCTCCAGGCACCAAGCGGCAAATCTTCGAGAAGAAGC
Long Flanking Sequence:
TTCCACTGTGTGATGGTCCACCCCAGATGCCTCCGATCCCAGAAAAGTCAACTGCTCTCCTGGACAATGTTAACATAGGGCTTCCTTTTGGCACTGTACAGTTTTCACTGCCATTTGTGGATGAAACTACATATTGTGTCACTTGACAAAGGTTTGCCTAAGTAGTCCTGACCCCATGTGATGATTTTGCTCATGGATGAATGAAATTCCTCCAGATTCCTTATTTCTTTAGGGTTGTATATTATTCAACACTTTCTTGCATTTTCAGATGGGAACCAATAAGTTTGCCAGTCAAAAAGGCATGACATCTTACGGCACACGGCGTCACCTATACGACCCTAAGACCGGTATGGAAAATCCTCTAGATCAATCGACAATCAGCCTGCAGATGGGCACCAACAAAGGAGCCAGTCAGGTACTAGAGATGAAAACATTTAATTTTTTAATAAACTTGCTTTAAATGCCATGCATAAATTATTTCACTTCCTCTTCTTTCTATC[A/T]GGCTGGTATGACAGCTCCAGGCACCAAGCGGCAAATCTTCGAGAAGAAGCTGGACATGGAGATGTGCGACACTTCTATCGTCTCGCTGCAGATGGGAACCAACAAGGTTGCGTCCCAGACCGGGATGACGGTGTACGGCCTGCCGCGTCAAGTGTACGACAGCAAGTACTGCTCCAGCGCCAATGAATACATCAACAACGGCCAGGACTCAGAGATGGATGGATATCAGTACTCCGACTAGGATGAACAGCCGGCACACTACTTTTTGTTTTTTTAATTCACCTGCACTTTTGATATTCCAGATTCATGTCGACAAGTAGGACCAGCTTTAAATGTTTACCGCCACCACAGCCACTGATCATAGCTGCAGACTTCAGTGTCTGACCGGTCGTAGAAAACTAAATTAGGAGTATTTTGTTGACTTTTTTTAATGGAACATTCCATCTTTGGCGAAAATAAGCTCATTTTACTGGTCACCTAGAGTTAAACGGTAACACTTT
Associated Phenotype:
Not determined