ZMP
si:dkey-46d17.3
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate leucine rich repeat and fibronectin type III domain containing 2
Human Orthologue:
LRFN4
Human Description:
leucine rich repeat and fibronectin type III domain containing 4 [Source:HGNC Symbol;Acc:28456]
Mouse Orthologue:
Lrfn4
Mouse Description:
leucine rich repeat and fibronectin type III domain containing 4 Gene [Source:MGI Symbol;Acc:MGI:238
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa41059 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa12260 | Nonsense | Available for shipment | Available now |
sa17394 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa41059
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000109404 | Nonsense | 46 | 588 | 1 | 2 |
ENSDART00000148038 | Nonsense | 128 | 914 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 7 (position 61061663)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 60280628 |
GRCz11 | 7 | 60585865 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTGTCTGCATGCCCCTTTCACTGTGTCTGCAGAAATCTCTCTGAGTCTT[T/A]AAGTACGCTTTGTGCAGATAAAGGCCTTCTTTTTGTTCCACCAAATATTG
Long Flanking Sequence:
CTTATTCAGAGCAAAAGAAACCACACATCAGCACTACAAAGCTTATTCTTAAAACATAATGACTAATGTTTTACTCTCTCTGCTTTCTCTAGGTCTGTGGATCCCTCCCCTATCTACCATGCAAGACTCCCCACCCCTTCAGCCATTCAGAAAACCACATCATTCCCATAGTTTATGCCATCCTCACAGGAATACACATGCACCATCATTCTCCTCTCATCCATCAATCCATCTGAAACAAAACCTTCTCAAGCCCTCTGCAGCATTTCGACGACCCTCTCCTTCACTGTGGCCAAAGTTCACCAGCAGATACTCTCCACCCCAGGACACATCCTCAGCAACACTGCAACTGCCATTACTGCACTGGCTGGCATTGGTCACTTGTGCCTGCCTGTTGCCTGCTCTCTTTGGTCAGATTCCAGGAGTCGTAGCCGGTGAGACGTGGGGCGTAGTGTCTGCATGCCCCTTTCACTGTGTCTGCAGAAATCTCTCTGAGTCTT[T/A]AAGTACGCTTTGTGCAGATAAAGGCCTTCTTTTTGTTCCACCAAATATTGATCGTCGAACAGTAGAGCTTCGTCTCGCTGACAACTTCATTCGAGAAGTAGGAGGAGTTGATTTTGCCAACATGAGTGGACTGGTGGATTTGACACTGTCCCGGAATACCATCAGTCACATCCGGCCACTTGCATTTTCAGATCTGGAAAGTCTTCGTTCCTTGCACTTAGATGGCAACCGACTATCAGAGCTGGGCCCACGGGACTTAGTAGGCATGCTAAACCTGCAGCATCTCATTCTCAACAACAACCAACTCACCAACATCTCCTCTGAGGCCTTTGATGACTTTTTATTCACTCTAGAGGATTTGGACTTATCCTACAACAATCTGCGCAAGGTTCCTTGGGATGCTATTCAGAGCATGGTCAGTCTGCACACATTAAATCTAGATCACAATCTAATTGACCAAATCTCTGAGGGAACTTTTAGTGAACTCTACAAACTAGCAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12260
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000109404 | Nonsense | 479 | 588 | 1 | 2 |
ENSDART00000148038 | Nonsense | 561 | 914 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 7 (position 61062963)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 60281928 |
GRCz11 | 7 | 60587165 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCACAAGTGAGATGGGATAAGGGTCATCTTATGGCAGCCAACCTGGTGTG[G/A]ATGTATCAAATACAGTACAACTGCACTGYCGATGAGACACTTGTTTACAG
Long Flanking Sequence:
TTGGAGGGTCAAAGAGCAACGCTCAAATGTCGTGCTATTGGAGATCCAGAGCCAGTGATCCACTGGGTCTCACCAGATGATCGTATCATTGGCAATTCCAGTCGTACCACATCTTTTCGAAATGGCACACTTGAGCTACTTGTGACTGTTGCTCGAGATGATGGGACATACACTTGCATTGCTATCAATGCTGCAGGTGAGGCCACCTCGCATGTTGACCTGAAGGTTATCCCTCTTCCTCATCGTGGAAACGGAACAGCATCGTCAACTCGTGACCCAGGATCATCGGACATTACAAGAGGCAAAACCTCCAGTGGTCAAAGTCCTGGTATAGACTCTAGCAGCGATCCCCAAGAGGGACGAGAGGACAGTCAGATAGAGGGTGGGGATGTAGTGAGCGAAGGGGTTGAGGAGCAGATGGTTGGAGTACAAGGAGTGACATCAACCTCAGCACAAGTGAGATGGGATAAGGGTCATCTTATGGCAGCCAACCTGGTGTG[G/A]ATGTATCAAATACAGTACAACTGCACTGCCGATGAGACACTTGTTTACAGGTGAGTGAAACCACTATCAAGATAAACACAACCATGACTTTTGGTCAATTTAAAGAGCTGATTAAGGAACTGCAAATTTAAAATATAGATTCTGTGGAAGTCAGCATTTCGCTTCAAAAACTGAATTGACAAGATTCTAATTCTATGACAGGGCTATTCAATTAGTTTGTTATGGGGCCAGTTCATGAAGAGCAACTTAAATGAAGGGCCGTAGAGATATGACTTGCAATGTAAGTGATGACACAACAGCAATAAAAGAGCCCATATATTGAATTTTTGCTCCTTAAGATATCCACAATGTTTTTATTTTCTACAAAAAAAGTTAATATGTTGTATTTTTAAAACTACATTGTAAAATGTGTTTTTTTAACAAACATATTCAAATGTTGTACTTCAAAGCACAACAAAATCAGTGTATTGCTTAAGTAGGCTTCTTCTACATTCAAACAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17394
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000109404 | None | None | 588 | None | 2 |
ENSDART00000148038 | Nonsense | 688 | 914 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 7 (position 61073431)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 60292396 |
GRCz11 | 7 | 60597633 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGCAACCAKGACARWCATCATGAAATAGGCGAAGAGGTCGGATGCTCA[G/T]GAACAGACTCACCGCCTCTTCCTTCAAAGGGAGCMRATGTCTTTTCWCAA
Long Flanking Sequence:
GAACAGCCCAGAACATTTTCATTAGATTACTTAGTGCATGCTTTTTGTGCTACGGACAAGGGAATAAAGGAACACGTCTCAGTAAAATACTGTTTCGTTGTGATGGAATGTGGAGAAGGTAATTGCTTCAGGTTACTAACCACCCACTCTCTCTCTCTCCCTCCTTTTTCAGGATTCTACCCCCCACGAGTGACAGCTTCCTACTGAAAAACTTGGTCTCTGGCTCAGACTACAATCTGTGCGTGCTAGCCATTTTTGATGACACAGTCACTTCTATGGCCGCCACAAAGATCCTTGGTTGCAGCCAGTTTAGCACCAAGGACAATTATCCAGACTGCCGTTCTCTTCAGGCCCATTTTCTCGGTGGTACCCTTACAATTTTGGTTGGTGGGATTGTTGTGGTAACACTACTGGTGTTTACAGTGGCACTGATGGTACGCCACCGTGTGTGCAGCAACCATGACAATCATCATGAAATAGGCGAAGAGGTCGGATGCTCA[G/T]GAACAGACTCACCGCCTCTTCCTTCAAAGGGAGCCGATGTCTTTTCTCAAAGTAATGGAAATGGGAATGTGATGATGGTAGTGCTGCCTAACGAGCTCATTCAAAAACGAAAAGTGTCAGAGGGAGGGTTGGTTTCGCCGCCAAAAACAACTTCCAAAGTGAAACCAAAAACTCTCCCAAAGCCAAGAGTGAATCTGGAGCAGTTCAGGACAGGACTAGAAGTTGAGGTCGGATCTATCAAGCCTCTTCCGCCATACACAATGGAGAAAGAGCAAATGTCATTGTATTACACCCCCAGTAATAATTCACCCTCCACACTTCCACGTCAGTCACGTCAATTAGTAGCAAAATCACTCAAATTTCGCCCTACCAACATGGACACAAGTAAGAGAGCAAGTTTAAGCTTGGCTCCTCCCCCTACATATGGTCGTGACAGGCGGTTCAGTACAGGAGGGGGTGTTGTAGTTCGTCGGGGAGGTCAAGAGAGCCAATGGAACTCT
Associated Phenotype:
Not determined