Busch Lab

ZMP

tm9sf4

Ensembl ID:
ENSDARG00000002536
ZFIN ID:
ZDB-GENE-040426-1575
Description:
transmembrane 9 superfamily protein member 4 [Source:RefSeq peptide;Acc:NP_956804]
Human Orthologue:
TM9SF4
Human Description:
transmembrane 9 superfamily protein member 4 [Source:HGNC Symbol;Acc:30797]
Mouse Orthologue:
Tm9sf4
Mouse Description:
transmembrane 9 superfamily protein member 4 Gene [Source:MGI Symbol;Acc:MGI:2139220]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa43915 Nonsense Mutation detected in F1 DNA Not yet available
sa1226 Nonsense Available for shipment Available now
sa13048 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa43915
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000006765 Nonsense 69 651 3 18
ENSDART00000011554 Nonsense 59 314 3 16
Genomic Location (Zv9):
Chromosome 23 (position 7628020)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 7620483
GRCz11 23 7554455
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAGTTCCAGAACCCAGCTGCCCTACGAGTACTATTCACTTCCCTTCTGT[A/T]AGCCTGAAAATATTGTCTACAAGGCAGAAAACCTTGGTAAGTTGATTCAC
Long Flanking Sequence:
CAGTTTTTGGCTGAAAACTAAATCTGGGAAATGGCCTCTTAAAATTGTATTTATAAACATTTTATTGAATCATCAACCATAAATAGATTCATTCATCAACAAAATTATGCAGTGTTGCCCTTTGACAAAGCGACACATAAATCATACACATTTGCATTTTAGTAAGCTGTCAGAATGCAGTTTATTGTGTTTATATGCGAGTTATAATTATGTGGAATTCTAGCTTTGTTGATTAGTTTTTGCTTTACACCGACAAAGGAAACCAGGTTAATGTGTTAACATGACTACGCACATAGTCAGAGCATTAACCATAAAACTTTTAAGAATGCACATGTGAATGCAGTTAATTATTATATTCCACAAGAACCAAAATTATCAAACAGGTTTCTAAATCTATGCTGTGGTATTTATAGTGTTTACCTGTATTTAATTGCCAGGCTGTGAAATTGACCAGTTCCAGAACCCAGCTGCCCTACGAGTACTATTCACTTCCCTTCTGT[A/T]AGCCTGAAAATATTGTCTACAAGGCAGAAAACCTTGGTAAGTTGATTCACTGCAGGCATATATTTGAAATATTGTGAAGTATGTACACAAATAAAGTGAATATTTGTTGTAGTAGTGGACATTTTAATAATGGTGCTGATATGTTTCCAGGTGAGGTGTTGCGAGGAGATCGTATCGTAAACACACTATACACTGTTTTTATGAATCTGGACAAGAAGTGTGAGGTGTTGTGTAAAAAACCTGAAAGTCCCATCAAACTCTCAGTGGAGGAGAGTAAACTGCTAGCAGAGCGCATCCAGGAAGAGTACTATATCCACCTGTGAGTTCTTCCTCTGCCCCTTCATTAAACAGATAAATACATCCAGTATAGTGCATTCGTTCATACACTTTTGATCTGCTTGTGTCAGGAATGAGGGCCTAAGCAAAGTGCTGCATTGTTATTATTTTATTTTTTTACACACTAGAAATATTAAGTTTTTAGACATTTCACAATCTTTTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa1226
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000006765 Nonsense 474 651 14 18
ENSDART00000011554 None None 314 12 16
Genomic Location (Zv9):
Chromosome 23 (position 7645977)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 7638440
GRCz11 23 7572412
KASP Assay ID:
554-1135.1 (used for ordering genotyping assays)
KASP Sequence:
ATGCTGGCTCTGTTGTGCATGTGGTTTGGTATCTCGTTGCCKCTCGTGTA[T/A]CTGGGCTATTACTTTGGTTTTCGCAAGCAGCCRTATGACAATCCAGTCCG
Long Flanking Sequence:
CCTGTATTCTGCAAGAAATGTTTTAAATTAGCGAGTTCTTATTAAAGATAAGACTAGTGAACGCCTAATAACAATTTCTTTTTTTTTTTTTCACTTAAACATCCCAATAGTTGCTGACCACAGGTTAAAAAACCACAACGTTGTGTGAGAGTTTTAAAAAAGGCATTATAAATGTGTGTGGGAAAAAAAAGTGTTGAAGCATTTGCAAGAAAAGACTTCTGCTGTGCTAAGAATGTGATGATGAAGATCGAGTGGATCCAGGTTTCACCAAGCATGTTTTAGCAATTTTGAAAAAACTATAATAAGGCAGTTGTGTGATACTTTAAAAAAGCAGCCATCTGTTTTAGACTAGAACACTTCACTCTTTATCATGAAGCTTTCTTTTGTTCGCAGTGAATGTTTTTGTACACTGACTGCCATTTTCTCACATCTCAGGTTCCTTTCACTACGATGCTGGCTCTGTTGTGCATGTGGTTTGGTATCTCGTTGCCTCTCGTGTA[T/A]CTGGGCTATTACTTTGGTTTTCGCAAGCAGCCATATGACAATCCAGTCCGCACCAATCAGATCCCTCGACAGGTCCCTGAGCAGCGCTGGTACATGAACAAGTTTGTCGGGTAGGTCATCTCATTATTGTGTTTGTTAGAATGCGAGTAGGTGACATTCACCAACTGTACTTTCTTAATTGCACTTTAAAAGTTCTGATAGTCTTTCTTTTTTGACTTGATCTAGTAAAGCGGCTTCTCAAACAAGAAAAAAAGTATGTTAGGTCTTTGTTTTGTCATTTTAGTAGTGTTGGGTTTTGTTAAGAATTTTTTTTTTTTGATTCACTACAGAACAAACCACTGTTGTTGTCTTTTAATTTTCAGCCAGGCAGCCCAAGGGCTTCTAGTGAACTGTCTTTCCATTACAAAATTGTCAAATTTAATATCTAATTTCTTTAAAAACAGCAATATTCACTCCCTGTTAGATATACGATATGGAGTGGGTCTCAGATCGGACAAAAA
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa13048
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000006765 Nonsense 590 651 17 18
ENSDART00000011554 None None 314 15 16
Genomic Location (Zv9):
Chromosome 23 (position 7650259)
Other Location(s):
Assembly Chromosome Position
GRCz10 23 7642722
GRCz11 23 7576694
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TACCGGTGGTGGTGGAGGACKTTCCTTGTGTCTGGAGRATCTGCCTTCTA[C/A]GTCCTKATCTATGCCATTTTCTATTWCGTCAACAAGGTAACCTTCAGTGA
Long Flanking Sequence:
TATATCTAGGGATGATTGGATTGTTGGATTTCAAACCAGAGATTTGGCCAACAACAATACTATTTTAGCAAGTTATTTTATGGATAGTTATGATTTTGTTACTGATATCTAGTCATGCCTAGTTACTGGTAAATGTAGCATTTCTGGGACTCTACTTGCATGCTGTTCCAAGAACTTTTTGACCCTTTTTGTGTGCTTAAAGTGCTGCTTTGCATTCTTGTTGTTGATTGAGTGTTATAATCTTTGACGCTCTGTCCACTCATACACTCAGAAGATAAAAAGCAAATTTTAGAGCTACGATAACAAAAAGAAAGGTCACTTCATTTGAATGCAAAATCATCTTTGAAATGGCGATGCCGTTCACTCGGTCTGGTAAAACTTAATCACTTACTGTCAGTAGAAGTTGAATATGACAGCTGTCAATCAATGTGGCTCCTCCCTCCGCAGGACTACCGGTGGTGGTGGAGGACGTTCCTTGTGTCTGGAGGATCTGCCTTCTA[C/A]GTCCTGATCTATGCCATTTTCTATTTCGTCAACAAGGTAACCTTCAGTGACTATTGCTGGTTAAGTTCATATACAACACCTTATGTTTTTGTTATTGGTTAAAACACTTTAAAATGTGTTTTAGCCTCAAACTGGCATGAATTCTACAATAGATCATTCTCAGTGTACACAAAGTCAGCTGCTTTCTAACCCACACCAACTGCCGTAAAATAACCAGTTTAAGCATGAATAATGAGGTGTTTGTGTATCTTTGTGGGACTTATTTACATTTTCTGGAATCTTCTGAAGCAGAGCTAAACAGACAGTCTGAATTGTATGTCTTGTTTATATATAAAAACACACACACGTTACTTGCATTCGTTTTTTTGGGGGGGTTTTCTTAAGGAAGTCCAAATATATTTCAGACCATTTTACTTCTTGTATGTCTTATTGGGGACCCCCTCAAAATTTAGATGGGGCTATCCTGTTCAATAAACTCATAAATTCAGTTATAGTAAGAA
Associated Phenotype:
Not determined