ZMP

smarcd3b

Ensembl ID:

ENSDARG00000019969

ZFIN ID:

ZDB-GENE-080509-2

Description:

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b

Human Orthologue:

SMARCD3

Human Description:

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [S

Mouse Orthologue:

Smarcd3

Mouse Description:

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 Ge

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa12626	Essential Splice Site	Available for shipment	Available now
sa12191	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa12626

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000006724	Essential Splice Site	90	476	2	13

Genomic Location (Zv9):

Chromosome 7 (position 44187812)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	41178112
GRCz11	7	41458185

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CTTCACAGCAGCAGATCCAGCAGCAGGCCGTACAGAACCGAAACAGAAAG[T/A]GAGTATAATACGACATGCTCAAGAAGATCCTATAAAGATACAGTAAATTT

Long Flanking Sequence:

GTACAAAAATTTACAATTTTAAAAAGGAGGTGTGGCACCCAACCTCACCATTTGAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGCTGCTTCTTCTGTACTAGTCTGTAAGAGGAGTTTTAACAGAAATCTTTAATTCTTAATCTTAAATTGAACTCTGAACCTTCAACGTGACATTTATTTGAAGGCAAATATGCACTGTTAGTTCTCTACTAGTGATCTTGTGTTAGGTATTAGTGATCAGTATGTTAATTATATAAATATCTCCACCTCACCTTCTTATTTTTTGTCATTTTTTTTTCAGCGACCTGGCATGCCATCAGGAGCACGAATGCCACATCAAGGGGCTCCAATGGGGCCTCCAGGACCACCATATGGAGGAAGTCCTGCTGTCCGGCCTGGACTTACCAATCAGTCCATGGAGGCCAGTCGCAAACGGCCCAATCCTTCACAGCAGCAGATCCAGCAGCAGGCCGTACAGAACCGAAACAGAAAG[T/A]GAGTATAATACGACATGCTCAAGAAGATCCTATAAAGATACAGTAAATTTAAGCATATTGTGCCTTGTTTGACTGAGCTACAGTACAGTATAGTAATGTATGATTCGGTATGGGTCACCCTGATCTGGCTTGTGTACCCTTAAGGCTGATTTATACTTCTGCTTCTGCAGCCTGCGCGTGGACGCATTGCCCTCGCCGTGGCTGACACTGACACGCACTCTTTTTAAAATGTAACTACATGTTGCAACGACATGTAACCCAAGCTCTGTTATTGGTAGGCTTGGTAGTGCTGACGAGTGTGGGTGGGACCGAGAGCTGTGGGAAACCGTTTGAGTGAGTGTTTACAAGTTTTGAGTTCTATGTAGGAGCATCACGTGGAAAGTTTTGTTTTGTGTTTACCTTATTATTAAAGCTGTTGCACGTTCCCTGGTTCCTGCTTCAAAATGAGCGAGTTTAAGCTACTTCTACAAGAAGGTAGCGTTCAGAAAAAACAACACCAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa12191

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000006724	Nonsense	310	476	9	13

Genomic Location (Zv9):

Chromosome 7 (position 44174953)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	7	41165253
GRCz11	7	41445326

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TTAWTGAARARCTGTNNTTTTGCCTTCATCTCCTCTCATAGATCTTTGACTG[T/A]CCACGTCTGAARTTCTCTGAAATTCCCCAGCGCCTCACCAACCTTTTACT

Long Flanking Sequence:

CTCCACTTACTTTATATTGCTTTAAATTCAATGTTTGCAGAATCAATGAAATTCAGCTTTTTAGTGATTGAAAGTGGGACTTTGACATTTGGTTTCGATTGTGAATCCTGATTAACTGAGTAATGTAAGCATGTGTCAATGGTGGTGTGTCCTGTGTGCAGCCTCCTCAGTTTAAGCTGGATCCGCGTCTGGCTCGTCTGCTGGGCATTCACACACAGACCCGCTCCAGTATTATACAGGCCCTCTGGCAGTACGTCAAAACCAACAAGCTGCAGGACTCGCATGACAAAGAGTACATCAACTGTGACAAGTACTTTCAACAGGTACGCCTGATTGCAAGCATTCATTCACATTCATAAATAGCATTCATAAAAGATATTTGATATGAATTTAACATGCACGGAGATTATGCATGGTGGACTTATTTATATAAAGCCAGTTAACTAGATTTTATTGAAGAACTGTTTTTGCCTTCATCTCCTCTCATAGATCTTTGACTG[T/A]CCACGTCTGAAGTTCTCTGAAATTCCCCAGCGCCTCACCAACCTTTTACTGCCCCCCGACCCTATTGTCATCAACCACATCATCAGGTTTGTGTGCTTATCAGTCAAAATACACTGTTCTTCACTTGATATGCTCCTCGTCCAAAGTGTGAAGTCAGTAAAGTTTGTGTTTTAGAGAAAAAAATAATAAAACTTTTATTTATTTCTTTAAGACTTTTCATACAAAAAAATGCAACTCAAAGTGCTTCACAAGCATAAATCAGATATTAAAAAAAACATCATCAACATAAGGTAATCAAAGATTTGAATGATTTGAAAAATCAGTGCTGTCAAAATTATTGCTTTAAAGCATGCGATTAATTTGAAATATTTAATGCATTAAGAAAAAATTAACGCAGTTGCAGTTTTTTTTTCTGTTGTGGTCGACGTGTGTTCAACATGCAAAAAAATATGGATAAGACCAAGGAAGCACTTTTTTAAGGCAAGTTTCAGTATGAAACA

Associated Phenotype:

Not determined