ZMP

rbfox1l

Ensembl ID:

ENSDARG00000021184

ZFIN ID:

ZDB-GENE-040923-2

Description:

Fox-1 homolog-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZT82]

Human Orthologues:

RBFOX1, RBFOX2, RBFOX3

Human Descriptions:

RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:HGNC Symbol;Acc:18222]
RNA binding protein, fox-1 homolog (C. elegans) 2 [Source:HGNC Symbol;Acc:9906]
RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:HGNC Symbol;Acc:27097]

Mouse Orthologues:

D11Bwg0517e, Rbfox1, Rbfox2

Mouse Descriptions:

DNA segment, Chr 11, Brigham & Women's Genetics 0517 expressed Gene [Source:MGI Symbol;Acc:MGI:10636
RNA binding protein, fox-1 homolog (C. elegans) 1 Gene [Source:MGI Symbol;Acc:MGI:1926224]
RNA binding protein, fox-1 homolog (C. elegans) 2 Gene [Source:MGI Symbol;Acc:MGI:1933973]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa12116	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa12116

Status:

Available for shipment
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Availability:

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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000027364	Nonsense	55	382	2	12

The following transcripts of ENSDARG00000021184 do not overlap with this mutation:

ENSDART00000135669

Genomic Location (Zv9):

Chromosome 16 (position 34134784)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	31957268
GRCz11	16	31912856

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGCAATGGTGATCCTTCACTTCCCCAGGTTTATGCCCCACCCCCTTCATA[T/A]CCTCCACCTGGACAAGCCCCGCCCACACCTGCTGCCCGACTGCCACCCCT

Long Flanking Sequence:

AAAATATTCTGTACTGTCATCATGGCAAAGACAAAAGAGATCAGTTATTAAAAATCTGTTATCAAAACTATTAAGAATTAGAATGTGAGTAAACGTGTTGAAAATCATCTTTCCATTAAACAGACAATTGAAAAAACATAAAATACTTCAAATTTAACTGTAGGGCTAATAATTCTGGCTTTGTTTGTATATAAAGCATAAAAGGTGCCTTTGAATCCTTTTAATACAATATGTTAAAATGTCCTTTGATATTTAAATAGTAGTTTTAATTGGCAAAATAATCTACAGTTATTTAACAGACTTGTCTAATTATTCTCTAATTTTGACATATCTAATATTTCTCTTATTATTATATAATAAATGTTTTCATAACCAGTCAACAGATTTTTCTGTTTGTAAATGCTTCTCTCTCTCTTATTATAGGGTGCTGCTGCCCAGGAGGCGGGGCCAGGCAATGGTGATCCTTCACTTCCCCAGGTTTATGCCCCACCCCCTTCATA[T/A]CCTCCACCTGGACAAGCCCCGCCCACACCTGCTGCCCGACTGCCACCCCTCGATTTCAGCGCTGCTCATCCAAATTCAGAATATGCAGATCATCATCAGCTGAGAGTCTACCAGGGCCCTCAGCACGACGGGACGGAGTCTATAACTGCCAGTAACACGGTAAGACTGATCACCTGATCATTAACTGACTTGATAAGAATAAAATCTTTAGTCAACACTGGGCAGGTACATCTATAAATATAAAGAAATAATTTGATTTTAGAAGTAAAAAAAACTGAATAATATGATTTACTTGCAGTCAAGCAGGGTCAATCTAAAAGTATGAAAATTATATAGAAACAATGTTCCTGTATGTAGCAAAATCAGTGTGTATTTGCATCAGAAAAGGTATGCCAGGAATATGTATAGGCAGCTGATATATAATCATGCTCTGGTCCTCTGGGATCTCCTGTTTGAGCTAAAAATATCTCTTATGCCCTTTGCACATCCTTCCTTTGCCT

Associated Phenotype:

Not determined