Busch Lab

ZMP

ca16b

Ensembl ID:
ENSDARG00000060123
ZFIN ID:
ZDB-GENE-080818-1
Description:
Protein turosine phosphatase gamma B [Source:UniProtKB/TrEMBL;Acc:D2U7Y3]
Human Orthologue:
PTPRG
Human Description:
protein tyrosine phosphatase, receptor type, G [Source:HGNC Symbol;Acc:9671]
Mouse Orthologue:
Ptprg
Mouse Description:
protein tyrosine phosphatase, receptor type, G Gene [Source:MGI Symbol;Acc:MGI:97814]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa33951 Nonsense Mutation detected in F1 DNA Not yet available
sa33950 Nonsense Mutation detected in F1 DNA Not yet available
sa12018 Nonsense Available for shipment Available now
sa7588 Missense Mutation detected in F1 DNA Not yet available
sa9647 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa33951
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017309 Nonsense 10 1382 1 29
ENSDART00000122241 None None 217 None 7
ENSDART00000126246 None None 253 None 9
Genomic Location (Zv9):
Chromosome 6 (position 46099235)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 46160169
GRCz11 6 46162051
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCTCTAATTGCGCATTTAGACATGTGGAGATTGCGAGGACCGTGTCGTT[T/A]AGGGATGTTGTGTTTGACTTTATCAGCCCTTCTCATCCAACCCATCAGCT
Long Flanking Sequence:
GTCTTCAGCGGGCGCTCAGAAGCTCAGCCTTCGGCGCTAGGATCCAGAGGGCAGGGCTTTGATTTCTCAACTAATTCCTCTGGCAAAACACGAAAGGCTCATATGCACAACTTCCTGGATAGAGAAGCGGATTCAAGCGACTGACTTTGTAGATGCGCGCGCTCGAGATAGAGAGAGAGAGAGCCGCTGTACAGAACAGACGAGGACGAGCATCTGAAAGTGCGTCCGGCTGGGATTAATAACTACTTGATAATGTAAAGAGAATGTAAAAAAGGACGCCACAGACAAGAGAAGTGTGCGCGGATTGTGGGCTGTCCGAAATGTCCCACCAAACAGGCGCAAGATTCGTCGCCGGTCATTAAACATCGCCTCGACCACTTGTCATTATTTTGGTTCGTCAAGTTTGTGGTGTTTTTTCTTCACTGACGCTCAATTTTGATCCGCCATTCTGGCTCTAATTGCGCATTTAGACATGTGGAGATTGCGAGGACCGTGTCGTT[T/A]AGGGATGTTGTGTTTGACTTTATCAGCCCTTCTCATCCAACCCATCAGCTGTCATCCCGGTAAGAGAGGCCTTTGTGCTTAATATTTTATCATCGGAATCATATTTTTTCTCCTCTGAAAAGTTGTGTTCGGCGTGCAGGTGCATCCGTGTCGATCAGCGCCAGAGATCATGAGGCATTAAGAGTGATGGTGTGTGTTTAGAGCACGTAACTGTAGGGTGCAAAGCGAAATGATCGTAACTGTAGCTGATGAATTTTAGCATTTAAAAAGGTGGATATGATTCATCACCGATTGTCAGTTTTGAAGTGTTCAGTGACAGGATTTAGCTAAGAGATCGAATGGTCTCGCGGACTTGATTGTTCCCAAGGTGATGTCATGCAGGCTGCGTGAAGGGTATCCAGAAACTCATAGATTTGACTTGAGTTAATTAAGTATTTTATTTAATTTCCCTCGTTTTAAAGTGTAATTAATAAAAAAGTAATAAAACATATTTTAATTAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa33950
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017309 Nonsense 311 1382 8 29
ENSDART00000122241 None None 217 None 7
ENSDART00000126246 None None 253 None 9
Genomic Location (Zv9):
Chromosome 6 (position 45966033)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 46026967
GRCz11 6 46028849
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGATTACCTGAGGAATAACCATCGGCCCATTCAAGATCTCGACAGCCGG[C/T]GAATCTTCAAATCGGCTCTAATGGATGCCTGGATGCCTGAGACCATGGCC
Long Flanking Sequence:
TAGTGACCCTCTAGTGACCCCTAACCGAAGCACTAAAAAATTAACTGTAAAATTGAAGCACAAATAATTGTACATTTTTATATCCAGGAATGACTTTACTCTCTCTGAATAAATCAACCTCACTCCTAAATCTTACTCTGGATGTGTACACAGCTAGCACGGATTAACTAATCCTTTTCAATCTTTCAGTTTTTACCGCCTGCTTTATTCATCGTCACACAAAATAAAGCCATTAATTCCCATCATGCACGTCTCTATCACCTTTTTTTTTCACCTCCTTTCCAAAAGTAACGTGGCATCATACGCGTGTTTCTCCTGCATGAAATAATGAAACGAAATGGAAAATCATGATCAAACCAGTGGATAATAACATGACTCTCTCTCTGTCTCTCTAGCTCGAGGCGTTTTATTCCATCTTCACCACAGAGCAGCAGGATCATGTGAAGTCTGTGGATTACCTGAGGAATAACCATCGGCCCATTCAAGATCTCGACAGCCGG[C/T]GAATCTTCAAATCGGCTCTAATGGATGCCTGGATGCCTGAGACCATGGCCAGCGCCGCAGACACAGAAACATCTCGAGGTATGAGTCTGACTGATTGAGGAGAAAGGCAGATTTGATTTCTATTCATATGATAATTGTACCAATACAAAAGTGATGGTGATTAAATAGAGAGGTTGCCCCAAAATGCAAAAAAGAAATGCTGTTGATTTGCTCACCCTTTAGACCATCCATGTAGGCGACTTTTTTCTTTTGTCCCCAATCTTTTTATCAAAGCTTGACTAATTTAGTGAGTGTACATAGATTGCTAGGTGACCATCAACCGTCAAAGACCCAATATGTGAACGAACCCTAAAAGGCCATCTTCATTTGTGATCTCCAGCAGTTGATCTTCTTCAAACGTGTTGTAGATCCATTCCTTGGCAGTCCTTCACTGGGCCTTTAAAATAGTATTATTTTTTATTTTAAATATTAAGTTTTTAGTTACTCCCAAAATCTTTTTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa12018
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017309 Nonsense 584 1382 12 29
ENSDART00000122241 None None 217 None 7
ENSDART00000126246 None None 253 None 9
Genomic Location (Zv9):
Chromosome 6 (position 45944685)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 46005619
GRCz11 6 46007501
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATAAAAAAGAGGACGATGAAGAGGAGGANNNNNNAGAGGAAGAAGAARAA[C/T]AGAGAGATGAGGAGAAGAAGAAGAAGGGGAAAGATGTGACRGTCAAGGAT
Long Flanking Sequence:
ATGGGTGTTTAAATCATTTAGGATTAATCATGCAGCTCAGCATCTAATCATTTTTAAACCTATGTATGCACTTATTTATTCACACTTCTTCCATCTGATTTCAGCCTACAGTTTCTCCGGCCTCTTCAGCAGACATGGCCCCCATCAGCTCAGGCTCTTCAACCTGGACGTCGGCTGGCCTCCCCTTCTCCTTCGTCTCTATGGCCACAGGAATGGGTCCACCATCCAGTGGAGGACAGGCCACCGTCGCTTCTGTGGTGACCAGCACATTATTAGCCGGCCTGGGCTTCAGCGGCAGTGTCATTTCATCCCTTCCTGGATCCTTCTGGCCAACGCATTCAACAAATACAGGCCCGTCGCCTACTCAACATCCAGCCACTCCAACAGCCGAAAACAGCCCATCTGAAGACAGCACCGACACTCAGAACAAACTCGAAGAAGAAGAAGAGCATAAAAAAGAGGACGATGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGAA[C/T]AGAGAGATGAGGAGAAGAAGAAGAAGGGGAAAGATGTGACGGTCAAGGATAAAAAGCAGACAGTGCAAAAGCCCACCGCTCCAATCCCGACATCTAAACACAGAGATCGAGAGAGACCGGATGCTGAGAGTTCTACACTGACCCCTGCTGAAGTGGAGGAGCAGGTTTCTGGAGCCACTGAGAGGCCGGATGCTGAGGATTCGTCAAAAGCGACATGGCAGGATGATAATGATATGCAGATTCCCTCCAGCTCTACAGAAAGCAGCAAACTGAGTGACGAGGAGAAAGCAAACTGGCCATACTACATTAACACTGGTAAGGGAGCTGTGAAGCTGCTGTGAAAAATAATATCTGTGGAGAAGAGCGAATAATTGCTAATAATTTTGACCTTGCAATATTTTTTGCCTTAAAATGTTTTTTATTTTTTTTATTAACAACTGGTTTTATTCTAGCCAAAATAAAACAACTGGATAAGACTAAAATAAGACTTTATACAGAAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa7588
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Missense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017309 Missense 671 1382 12 29
ENSDART00000122241 None None 217 None 7
ENSDART00000126246 None None 253 None 9
Genomic Location (Zv9):
Chromosome 6 (position 45944424)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 46005358
GRCz11 6 46007240
KASP Assay ID:
554-4252.1 (used for ordering genotyping assays)
KASP Sequence:
CGACATGGCAGGAYGATAATGATATGCAGATTCCCTCCAGCTYTACAGAA[A/T]GCAGCAAACTGAGTGACGAGGAGAAAGCAAACTGGCCATACTACATTAAC
Long Flanking Sequence:
CCAGCACATTATTAGCCGGCCTGGGCTTCAGCGGCAGTGTCATTTCATCCCTTCCTGGATCCTTCTGGCCAACGCATTCAACAAATACAGGCCCGTCGCCTACTCAACATCCAGCCACTCCAACAGCCGAAAACAGCCCATCTGAAGACAGCACCGACACTCAGAACAAACTCGAAGAAGAAGAAGAGCATAAAAAAGAGGACGATGAAGAGGAGGAGGAGGAAGAGGAAGAAGAAGAACAGAGAGATGAGGAGAAGAAGAAGAAGGGGAAAGATGTGACGGTCAAGGATAAAAAGCAGACAGTGCAAAAGCCCACCGCTCCAATCCCGACATCTAAACACAGAGATCGAGAGAGACCGGATGCTGAGAGTTCTACACTGACCCCTGCTGAAGTGGAGGAGCAGGTTTCTGGAGCCACTGAGAGGCCGGATGCTGAGGATTCGTCAAAAGCGACATGGCAGGATGATAATGATATGCAGATTCCCTCCAGCTCTACAGAA[A/T]GCAGCAAACTGAGTGACGAGGAGAAAGCAAACTGGCCATACTACATTAACACTGGTAAGGGAGCTGTGAAGCTGCTGTGAAAAATAATATCTGTGGAGAAGAGCGAATAATTGCTAATAATTTTGACCTTGCAATATTTTTTGCCTTAAAATGTTTTTTATTTTTTTTATTAACAACTGGTTTTATTCTAGCCAAAATAAAACAACTGGATAAGACTAAAATAAGACTTTATACAGAAGAAAAAAATAGCAAATACTATGAAAAATGCCTGGCTCTGTTAAACACCATTTGAGAAGATTTTAAATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACAGTTAAAGTCAGAATTATTAGCCAATTTTTTTCTTCTTTTTAAAATATTTTCCAAATGGTGTTTAACAGAGAGTGTTTAAATGTCACCTTAAGCTGTATAGAAGTGTCTTGAAAAATATCTAGTCAAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9647
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000017309 Nonsense 935 1382 19 29
ENSDART00000122241 None None 217 None 7
ENSDART00000126246 None None 253 None 9
Genomic Location (Zv9):
Chromosome 6 (position 45909571)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 45970505
GRCz11 6 45972387
KASP Assay ID:
2259-8057.1 (used for ordering genotyping assays)
KASP Sequence:
ACATAATGGTGACTCTGAAGARCACTAAAGTTTATGCTTACTATACACTM[C/T]GACATTTCATCRTACGCAACAGCAAACTGAAAAAGGTGCGTTAAAGCATT
Long Flanking Sequence:
GGTTCATTAGACAAGTTAGAGTAATTAAGCAAATCGTTGTATAACAGTGGTTTGTTTTGTAGAAAATTGAGAAAAAATATTGCTTGAAGGGGCTAATAATTTTGACCTTAAAAGTTTTTTTTTTTTTTTTTTATTTAAACTGCTTTCATTCTAGCCTAAATAAAACAAATAAGACTTTTTTCTAGAAGAAAACATAGGATCAAACATACTGTGAAAATTTCCTTGCTCATCAACATCATTTGGGAAATATTTGAAAAAAAAAGAAGAAACTCACAGGAGGGCTAATAATTTTGACTTTCAATGTACATAGTCTGAAATGCATTTAAGAACTGCTCTGTGTGGCTGTCATTTGTTGAGTTATTGTGCTAATGTAGATTTTGATGTCTTTGTTGTGTTTCCAGAGGAAATGTGATCAGTACTGGCCGTCGGAGAACAGCGAGGTGTATGGTAACATAATGGTGACTCTGAAGAGCACTAAAGTTTATGCTTACTATACACTC[C/T]GACATTTCATCGTACGCAACAGCAAACTGAAAAAGGTGCGTTAAAGCATTCATAGTTTAAAGAGACGGCTTCATAATATTTCTATATTACTTCAATACTTCTATAATACATAAAAGAACAAAGAGCAAAGAAACAGATCCAGGATGTTTCTTAATTTTTATTTAATTCACATTATTTTAACTTTCAACAACTCTGTTAATAAACAGAGCACTTCTGTTTGGTAGCTTGAACAATCAAGTAATAAATAACTTAAATTATTCACTTCTGGACTTTGTAAATATATTTTTAAAAATCTAATATAAAAACAAATAGCACCTCAACTTAAAATACCTGGCAGGCATTCCTAGATTTACATATCTCACAGTTTGCTATGGCAATGTTGTCGTCATCAACTTTATAATACCTCCAGGCCGCAGACATACTCACGCTTTCCGCTCCATGCTGCTTCTGTGTTCTACTTTGCCGGCATTTAACCAATAGTTTCTCAGCAACAAAAAGTG
Associated Phenotype:
Not determined