Busch Lab

ZMP

nalcn

Ensembl ID:
ENSDARG00000001835
ZFIN ID:
ZDB-GENE-050410-12
Description:
sodium leak channel non-selective protein [Source:RefSeq peptide;Acc:NP_001017549]
Human Orthologues:
CACNA1B, NALCN
Human Descriptions:
calcium channel, voltage-dependent, N type, alpha 1B subunit [Source:HGNC Symbol;Acc:1389]
sodium leak channel, non-selective [Source:HGNC Symbol;Acc:19082]
Mouse Orthologue:
Nalcn
Mouse Description:
sodium leak channel, non-selective Gene [Source:MGI Symbol;Acc:MGI:2444306]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa21514 Essential Splice Site Available for shipment Available now
sa11942 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa21514
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Essential Splice Site 730 1742 18 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Essential Splice Site 705 1717 17 43
ENSDART00000142289 None None 168 None 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32665969)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31821915
GRCz11 9 31632661
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGATCTGTGCATTGATCTGTGTACATATCTGTAAACCTCTTCTTCTTCCC[A/T]GCTACGAAAGTCAGTATTTAGCATCCGGGCTCGCAACCTAATGGAAAAGG
Long Flanking Sequence:
GACGTGAAGTCTCCTGTGTGTTTGCGTGTGCCACAGGGAGAGTTTCATGAAGCAGTTCATCGACCGACAGCAGCAGGACCCTAGCTGTCTGTTCCGTCGCCTTCCCTCAGCATCATCCTCGTCTTGCGACCATTCCAAACGCTCTGCCATTGAGGATAATAAATACATAGATCAGAAGGTAGCACATTCCATCACTCCTACAGTCTGCCCCCTCAATACACACAGGGACCAAACAATAATCTCATGAATGTTCTGAAAGGAACCGATCCATTTCCCACGCAACAAGACTCAAATAACCAGCAGTTATATAACAATATTTTCTTTATTACATTGGGATGTTTTTGTTTGCTAGTGTCAAAGTCAGATTTACCCACATAATAATAGTTGTTTGGAGATGTACACTTTTGAATTGTGCTGTGTATTGATCTGTGTATTGTGAATATGTGTATATGATCTGTGCATTGATCTGTGTACATATCTGTAAACCTCTTCTTCTTCCC[A/T]GCTACGAAAGTCAGTATTTAGCATCCGGGCTCGCAACCTAATGGAAAAGGAAATCACTGTCAACAAAATTTTGCGGTGAGCTTGTTTTTCTCCTTTTAATCACAGATCTTGTAGACATCAGGAATATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTACAGTGAAATTAACTACCAACTAATAAATAAAAATTAGTTTATAATTAAGGCAAATATAGAGGAAATATGGCAAAATTTCAGGGAAATAAATATTTTATTTTATTTTATTTCACAACCCACAATTTTATAATTAAGGGAAATATTATGGGAATATGGCAAAATTTCATAGAAAAATATATTTTGTTTTATATTATTTATTTATTTATTTATTGTCTTTGTCCCTGATCCATCAGGGTTTGCCACAGTCAAATGAACCGCCAACTACTACTGTTTTACACAGCAGATGATCTTTCAGCCGCAATCAACCATCGAGCTGGGAATTATTTTAGTTTAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11942
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000048469 Essential Splice Site 1558 1742 40 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Essential Splice Site 1533 1717 39 43
ENSDART00000142289 Essential Splice Site 41 168 1 4
ENSDART00000145204 None None 409 None 13
ENSDART00000048469 Essential Splice Site 1558 1742 40 44
ENSDART00000060066 None None 384 None 14
ENSDART00000135022 Essential Splice Site 1533 1717 39 43
ENSDART00000142289 Essential Splice Site 41 168 1 4
ENSDART00000145204 None None 409 None 13
Genomic Location (Zv9):
Chromosome 9 (position 32629202)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 31785148
GRCz11 9 31595894
KASP Assay ID:
2260-2007.1 (used for ordering genotyping assays)
KASP Sequence:
ATGGAGCGTCTGCACAATGGAGGAGACGTCAYCTTTCATGATGTACTGAG[G/A]TTAGAAAAGAAAAAGCCTGCTATTAATTCTAGCACATAATTTTACCTTTA
Long Flanking Sequence:
GTAACCATTGAATTCCATATTAGAATAAACAAATACTATATAGGTCAATGGTTACAGGTTTCCAGCATTTTTCAGAATATCTTCTTTTTTTGTTCATCAGAATAAAGAAGCTCAAACAGATTTGGAATGAGTGAACATTGTGTAAATGATGAGAATTTTTAGTTTTGGATCAGTTTAAGGGATTAAACTGTTGCTAATGATAGTAATTATTTACAGTATTTATATAGAAACAGAGCAATAATCTGAGAATTGTCTTTTAGTGTTTAGTCTAGAAACTATTATTAGGATAAGGTTTGTTAATCCAGCATCTGCTATTACAATAAAATAAAATTTGTAACACAGGGAGTGATTCCGACCTCTCGGGTGAAGTTTCTGCTCCGTCTGCTGAGAGGTCGTCTGGAAGTGGATCTGGACAAAGACAAGCTTCTCTTTAAACACATGTGTTATGAGATGGAGCGTCTGCACAATGGAGGAGACGTCACCTTTCATGATGTACTGAG[G/A]TTAGAAAAGAAAAAGCCTGCTATTAATTCTAGCACATAATTTTACCTTTATAACGAATCAGACTACATAAGATCTACTGCGATAAGATCTTCTTACCCAGACAAAACAGCTAGCACTGAAAGGGTCATATTGTACCACCCTCACTGCTGTGTTGTTGATGTTCTGTGGCCCATATGAAGTCATGTATGATTGTGTGAATGTGTGTGTGTTTCAGCATGCTGTCGTATCGTTCAGTTGATATCCGCAAGAGTCTTCAGCTGGAGGAGCTGTTGGCAAGAGAGCAGCTTGAATACACTATAGAGGAGGAAGTGGCCAAACAAACCATCCGCATGTGGTTGAAGAAGTGCCTGAAACGCATCAGAGCCGTGAGTCCATACAAACACTCATCGTTCAATTCAGATGCTGGATGACTACAGAAGAGGATTAGCGCCTATCAATAATAATGATAAACAACCTTCTCAAGATTAATTGGCATTATAATGTGTGATTTGAAGAAAATT
Associated Phenotype:
Not determined