Busch Lab

ZMP

thumpd3

Ensembl ID:
ENSDARG00000059634
ZFIN ID:
ZDB-GENE-030131-9745
Description:
THUMP domain-containing protein 3 [Source:RefSeq peptide;Acc:NP_001082863]
Human Orthologue:
THUMPD3
Human Description:
THUMP domain containing 3 [Source:HGNC Symbol;Acc:24493]
Mouse Orthologue:
Thumpd3
Mouse Description:
THUMP domain containing 3 Gene [Source:MGI Symbol;Acc:MGI:1277973]

Alleles

There is 1 allele of this gene:

Allele Name Consequence Status Availability
sa1193 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa1193
Status:
Available for shipment
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Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000083070 Nonsense 347 477 8 11
ENSDART00000135959 Nonsense 352 482 8 10
ENSDART00000136271 None None 152 None 4
ENSDART00000143378 None None 236 None 4
ENSDART00000146307 None None 193 None 4
ENSDART00000147507 None None 271 None 5

The following transcripts of ENSDARG00000059634 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 6 (position 23689053)
Other Location(s):
Assembly Chromosome Position
GRCz10 6 19944499
GRCz11 6 22004721
KASP Assay ID:
554-1102.1 (used for ordering genotyping assays)
KASP Sequence:
ATGTCTTATTTTCTATTTATAGCCCCTCGGGCTTGCCCTTAGACATTGTG[C/T]AGTGGGACTTGTGCAATTTGCCCATGAGAAGCAGTTCAGTGGACATCATC
Long Flanking Sequence:
ATCTGCCTCAAGATTCGACGAGTTGTGCATTCAGAGATGCTCCTCTGCATACCTGGATTGTAACGAGTGGTTATTTGAGTTACTGTTGCCTTTTTATCAGCTCGAACCAGTCTGGCCATTCTTTTATGGCATCAACAAAGTATTTGCCTAATAAACGACATGACCATCACATTAGTATGATGTACCTAGTGTACCTAATAAAGTGGCCAGTGAGTGTTTATATTTCATTAGATACTTATTTAAATGGGTAGGTATTCTGTAAGAATGAACAAAAAGGATTTCATAAAAGAAATAAACTTAAATACTGAAAAAGACAATACCTTTTTTTGCTTTTATTTTTTATTACTTTTTATATCTTTTTATTACTTAAATCCTTTTATTTAATAACAATTATTCTGATAGACCCAAATTTTATTGTGTCACAATGAAAAAAAAGTTGAAGTGCTTGCTATGTCTTATTTTCTATTTATAGCCCCTCGGGCTTGCCCTTAGACATTGTG[C/T]AGTGGGACTTGTGCAATTTGCCCATGAGAAGCAGTTCAGTGGACATCATCATCACTGACATGCCTTTTGGAAAGAGGTACTGACAGACTTAAGTAGCTGTAAAACAATTGTACAATAATTATGTATAGTATAAAACATTGCAGGTCATCGGAATGCTCATAATAACCGATTCACCAATAACTGAAAGAGTGCGTTTTAACCGCTTAATGGTATCAGTTAAGTAATTAAAAAATATTAGTTAATATTTTAATTGGCTGCATAAATGTGCAACACATATATATTAAATCACAACATACTACATACATATTTTGCTGAAGAAGCCAAATGAAAGTAGAATTTTGCTGGTCACAGTTTGACAGACGAGTTGATGCCAAACAGTGCTGATGTTGATTGCCTCTGCTTCGGAAACAAGCCGGCCCCAATTCGGAGAGTCTGGATTATCTCTCCATCAGAGCACACTCCGGCATTGCTCATAAGCACAACAAATAGGCTATATTTGT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037
whole organism
ZFA:0001094
quality
PATO:0000001
normal
PATO:0000461