ZMP
nlgn3a
Ensembl ID:
ZFIN ID:
Description:
neuroligin-3 [Source:RefSeq peptide;Acc:NP_001159804]
Human Orthologue:
NLGN3
Human Description:
neuroligin 3 [Source:HGNC Symbol;Acc:14289]
Mouse Orthologue:
Nlgn3
Mouse Description:
neuroligin 3 Gene [Source:MGI Symbol;Acc:MGI:2444609]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11831 | Nonsense | Available for shipment | Available now |
| sa22451 | Essential Splice Site | Available for shipment | Available now |
| sa35667 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa11831
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000090691 | Nonsense | 162 | 878 | 1 | 7 |
| ENSDART00000126074 | Nonsense | 139 | 815 | 1 | 5 |
| ENSDART00000145750 | Nonsense | 139 | 830 | 1 | 5 |
Genomic Location (Zv9):
Chromosome 14 (position 18215476)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 14009929 |
| GRCz11 | 14 | 14315492 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGATKCCAATYTGGTTCACATTTAACTTGGATATAGTTGCAACTTCTATA[C/T]AGGATCAAAATGAAGATTGTTTGTATCTAAACAKCTATGTTCCAACAGAG
Long Flanking Sequence:
AAGGTCTGAAGGCAGACATGTGCTGGAGGATTTTTTCAGCATACATCGGTGTCCAGCAGCGACAACAACATCCAGTATCACAGACTATGTGGTTAGCAATGCGCAAAAAACGTCTCCTTTTGCACCACCAGGACTGCTGCAGTCGCAGAGCTTGCAACATTTCTCTGTGGATATTGGTTTTTTGTTGGTGTATGATGCTTGTCCGGGGGCAAGGCTACTACCCCACAGTCAATACACAGTACGGGAAATTACGGGGGGCGCGGGTTCCGCTGCATAGTGAGATCCTGGGACCAGTGGACCAGTACCTGGGAGTCCCGTATGCCACCCCACCGGTGGGTGAAAAACGATTCCTACCCCCTGAGCCACCCTCGTCTTGGTCCGGGATCAAGAATGCCACTCATTTTGCACCAGTGTGCCCACAAAACATTCACAATGCTGTTCCGGAAATCATGATGCCAATCTGGTTCACATTTAACTTGGATATAGTTGCAACTTCTATA[C/T]AGGATCAAAATGAAGATTGTTTGTATCTAAACATCTATGTTCCAACAGAGGATGGTGAGTGTGTCGGGTATAACAAAGAAAAGATAGTGTCTCACTATTACATTCTGTCATTTCCTGTGTTGTGTTTGAAGCATGAGTTGTCGTCTGGCGCATGCTGTGTCTGTGCACATCATTTTCATTCCTCATCTTGACTTGATCTGCCATGAAGTCTTTCCATCAACTCTTCCCTTCCATGCCACTGTTATAGGTTCCTCTTTTGTGTTGTTCAAGAGAGCAAACCAAAAAGATAGAAAGAAAGTCAGAATAAAGCAATCAGTGAGCAAGTAATCTTTTTTTTTATGTTAGAGCTCAGATTTTAATCTGACATGAAGTTTGGATGTAATGATCTTGGTGCACCTCCCTCTCCTCACTGTCTTGACTGTTCTGGGGATTAGTTATCCAAGATTAGCTTGCTTGATTCCAGAATGAGCCTTTTGTAGAGTTGTTCAAATGTTCTGGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa22451
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000090691 | Essential Splice Site | 595 | 878 | 6 | 7 |
| ENSDART00000126074 | Essential Splice Site | 532 | 815 | 4 | 5 |
| ENSDART00000145750 | Essential Splice Site | 547 | 830 | 4 | 5 |
Genomic Location (Zv9):
Chromosome 14 (position 18402986)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 14197439 |
| GRCz11 | 14 | 14503002 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGCTCAGTGCTGTTGTCATGACCTACTGGACTAACTTTGCCAAAACTGG[G/A]TAAGTGCTTAAATGACAGCATGAAAGTATAATACTGTACATGTGCCATTA
Long Flanking Sequence:
ATGCTGGGTGTCAACCAGGGTGAAGGTCTGCGCTTTGTGGAGAACGTTGTGGACTCTGAAGATGGCGTCTCGGGCAATGATTTTGACTTCTCAGTCTCAGACTTTGTGGACAGTCTGTATGGTTACCCAGAGGGAAAAGATACGCTACGTGAAACCATTAAGTTCATGTATACAGACTGGGCTGATAGAGACAATCCTGAGACGCGTCGCAAGACTCTGGTGGCACTTTTTACTGATCACCAGTGGGTGGAGCCCTCAGTGGTAACAGCTGATCTTCATGCCCGGTATGGATCACCCACATACTTCTATGCCTTCTACCACCACTGCCAGAGTCTGATGAAGCCCGCTTGGTCAGATGCTGCCCATGGAGATGAGGTGCCCTACGTCTTTGGTATTCCCATGATTGGTCCGACTGACCTCTTCCCCTGCAACTTCTCCAAAAATGATATCATGCTCAGTGCTGTTGTCATGACCTACTGGACTAACTTTGCCAAAACTGG[G/A]TAAGTGCTTAAATGACAGCATGAAAGTATAATACTGTACATGTGCCATTATATGATTGTGTTATAGTCATATAACTATAACGAGTAAAAGTGTAAGGATATTAGAAAACCAATAGTATTTGGATGCAGCCTTTATGATGCAAGCTGAGATTGCATCACTCAGCGATGCATTGTCAGACACAATGCACTCAGTGAAGTAAGTGACGTTACTGTGACAGGTAGGGTTAGGGGTGGGGTTAGGTGAGCGCATTAAAAAGCATTGGATGCAGCTCAGATTGCACTGGACCAGGTCTGCATTCAGACCCTTCTCTAGAAAACAGGACAACAGGTCGACAGTAAAAGAAGAGAGAGTTATCTTTTAGAATTCTTTACCTTTTTATTTTTTATTTTTTTGAAGCAGTAGTTTTTAGAACATTTTGCCTGAAACCCTCTGTTTTACACCTGTCTCTTTAAAACCTTCCTGTGTGCTCTGACTGGCCTGCTGGCCTAGCCTCCTGTTAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa35667
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000090691 | Nonsense | 769 | 878 | 7 | 7 |
| ENSDART00000126074 | Nonsense | 706 | 815 | 5 | 5 |
| ENSDART00000145750 | Nonsense | 721 | 830 | 5 | 5 |
Genomic Location (Zv9):
Chromosome 14 (position 18432513)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 14 | 14226966 |
| GRCz11 | 14 | 14532529 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTGCATTTGCTGCTCTGTACTATCGCAAGGATAAGCGGCGACAAGAA[C/T]AGCACCCGCAACCCAGCCCACCACGAGCCACTACTACCAATGATGTGAAT
Long Flanking Sequence:
CTCAGGATACCAAGTTTATTCACACTAAAGCCAATCGTTTTGAAGAGGTGGCCTGGTCTAAATACAATCCTCAAGATCAGCTGTACCTGCACATTGGCCTAAAGCCACGAGTCCGGGATCACTACCGTGCTACTAAAGTGGCATTCTGGAAGCACCTGGTCCCTCATCTGTACAACCTCCATGATATGTTCCACTACACCTCTACTACAACTAAAGTCCCACCACTCGAAACAACTCAAAATTCCCTGTCTACCAAGCGTCCTAATGGCAAAGCCTGGCCATTTAACACCAAGCGGCCTCCAATGTCTCCAGCATATAATAGTGAGAGTGGAAAGGAACAATGGAATGGAGAAGAGGAGCCAGGACCTCTTGTGGTGGAGAATCCCAGAGATTACTCCACTGAACTGAGCGTAACCATCGCTGTAGGAGCTTCGCTGCTGTTCCTCAATGTTCTTGCATTTGCTGCTCTGTACTATCGCAAGGATAAGCGGCGACAAGAA[C/T]AGCACCCGCAACCCAGCCCACCACGAGCCACTACTACCAATGATGTGAATCGCCATGCCCCCGAAGAGGAGATTATGTCCCTGCAGGTGAACCAGACACATCATGAGTGTGACGCTGGGCCGACGGGAGACCCACTGCGACTCGCTTCACTTCCCGACTACGCGCTTACTCTGAGGCGCTCACCCGACGATATCCCACTCATGACACCAAACACCATAACGATGATCCCCAATTCACTAGTGGGCATGCCGAACCTACATCCATACAATACCTTCACAGCCGGTTTCAACTCCACTGGCCTACCACATTCCCACTCCACCACGCGCGTATAGCTTTATGGCGGTGAAGGGGACAAGTCGTTGGTTTTAATGAAAACATTACAGCAAGAGGAGTGAGTTCAGGATGATGATGGCAACAAAATAATTTGAATAAACATTTGCAAAAAGCAGTGACAAGTTCTTTCCAGATGTCAAGTTGTGCAAACCTGCCAAAACAGAACT
Associated Phenotype:
Not determined