ZMP

trpc4apa

Ensembl ID:

ENSDARG00000018840

ZFIN ID:

ZDB-GENE-000330-3

Description:

short transient receptor potential channel 4-associated protein [Source:RefSeq peptide;Acc:NP_57164

Human Orthologue:

TRPC4AP

Human Description:

transient receptor potential cation channel, subfamily C, member 4 associated protein [Source:HGNC S

Mouse Orthologue:

Trpc4ap

Mouse Description:

transient receptor potential cation channel, subfamily C, member 4 associated protein Gene [Source:M

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa41839	Nonsense	Mutation detected in F1 DNA	Not yet available
sa11819	Splice Site, Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa41839

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019450	Nonsense	531	774	14	19
ENSDART00000128126	Nonsense	3	246	3	8

Genomic Location (Zv9):

Chromosome 11 (position 26106888)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	24935713
GRCz11	11	25173329

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGTTGAGAGCTTTCTGAGAGGAGCCACATCATATGCAGACCAGATGTTTT[T/A]GCTGAAGAGAGGCTTGCTGGAGGTGAAGATCTTAATAGAACACATCAGAG

Long Flanking Sequence:

AACTCTGGGAGTCGATTTCTGAGTTCCAGTAATGGGTTCATTGACAGTTAAGGAATCAAGCCTTTTGGAGTCGACTCCCAACTTCAGAAAATTAGTTAACATTAGGGATTGGAACATAATTCTCAAGCTATTTTAAACAGATGTCTTTAATTTATTTTTTTTTTAAATGCACAAATTAGTTGTTGAATTTCTAATATATATTAGCCTTAATCATTTGCTTTCAGAAGGCAAATATTGTAATGCATCATGTCTGTGTTCTCTTGAAGGAGTTTAGTGTGTGATGGTAAAAAAGGGCTCCTCACGCGGCTCCTGACAGTTATGAAAAAAGAACCCCCAGACTCTTCCTTCAGGTGAGACACTAGATTTATAACAGTGTGTCTAAAGTTTTTTGCAATAACACATGAATAACGGCGACATATTTTCTCCCTGAAGATTCTGGCAGGCCAGAGCTGTTGAGAGCTTTCTGAGAGGAGCCACATCATATGCAGACCAGATGTTTT[T/A]GCTGAAGAGAGGCTTGCTGGAGGTGAAGATCTTAATAGAACACATCAGAGTGTCTGTATTTGGTTCGCAGAACTGGATGAGTCACTGAAATGTTGTCTTGTGATTGCAGCACATCCTCTTCTGCATCATTGACAGCGGCTGCAAGTCCAGAGATGTCCTGCAGAGCTACTTTGACCTGCTCGGGGAGCTTATGAAGTTCAATATTGATGCCTTCAAGAGATTCAACAAATATGTGAACACAGACGAAAAGGTACTTGTAGATGCTGTGGTATTGGAAAAAACTAAGGCTGTTGTTAACATTATGTGCTTGACTTTGTTGCCTCTTTTAGTTCCAGGTGTTCCTCACACAGATCAACAGCTCTCTGGTTGACTCCAACATGCTGGTCCGCTGTATTGTGCTCTCGCTGGATCGCTTCGAGAGCCAGACGGAGGATGTGAAAGGTGAATTCAGACACAGTGCTCTTGGATTGTTATTGAAAGTAATCTAAAATGTACAGTAC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa11819

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

C > T

Consequence:

Splice Site, Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019450	Splice Site, Nonsense	660	774	17	19
ENSDART00000128126	Splice Site, Nonsense	132	246	6	8

Genomic Location (Zv9):

Chromosome 11 (position 26110083)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	11	24938908
GRCz11	11	25176524

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TGYCCTTTCTTTTWAGGCTGGTCAACATCATCAACGTGCAGACCCTCACA[C/T]AGGCAAGACCACAGTGCACATCTTCTCCACCTGTTTGCCTCATTTCAGTC

Long Flanking Sequence:

TACCCCATTTGAAATCATTTCAATTAATTCTGCGGATATAATAGTACTTTTTTTTCTTAAAGCGTTGATATATATATTTCCTTGTTTAAGCTTTTGTCTTTAGTGCATGGAAACATTAAAATAGTTACATTGCTTTTTCATTTTAAGCATCCATGCACTTCAAATATGTCATAAGTGTGTAGTGTAGTAAAGAAAAATCATATGGAAATTTGCTTTAACTAGCTTTCTTGGGATTTTCTTTAAAAATCTGCTTGCTTTCAGTGATGTTGTAAATGGCTTAATCAGATGGATGGTCTGTCCAGAGCATTAGACGTGCATGTTTTCCTGGAAAATATTCTACTGGAAATAATGGCGTTGTCTATTTTGGTGGGTGTTTTTGCTTCTCTGCAGTGGTTGAAGTGCTCTCCGAGTGCTGTCTCCTGTCCTACATGGCTCGAGTGGAGAACAGGCTGTCCTTTCTTTTTAGGCTGGTCAACATCATCAACGTGCAGACCCTCACA[C/T]AGGCAAGACCACAGTGCACATCTTCTCCACCTGTTTGCCTCATTTCAGTCCTCTTGTGGTAATTATTCCTGTTTTTCTGGCTGCTATCCCAGGAGAACGTGAGTTGTCTTAACACCAGCCTGGTGATTCTGATGTTGGCCCGGAGGAGAGGCAAGCTCCCGTTTTACCTGAACGCCCTGCGGGAGAAGGAATATGCAGAGAAATATCCTGGATGCCTGCTCAACAACTTCCACAACCTGCTGCGCTTTTGGCAGCACCACTACCTCAACAAAGACAAGGACAGCACCTGCCTAGAGAATGTGAGTATTTGTAGGGTTTGGGGAACTCCGCACAATTTAGCAAATCGCAGTATGGATGTTTGGTAAATACATGTGCTACTGGTTTACCTTATGTGCTTCTTGTAAGCAGTAAACCAAATGTGCTTGAAAAGTAAAGTTGAAATCTTCACCCCCTGGTGGTGACCTGCAGTATAGGTCATATTTCTAGCCCTCTCCATGTAA

Associated Phenotype:

Not determined