Busch Lab

ZMP

trpc4apa

Ensembl ID:
ENSDARG00000018840
ZFIN ID:
ZDB-GENE-000330-3
Description:
short transient receptor potential channel 4-associated protein [Source:RefSeq peptide;Acc:NP_57164
Human Orthologue:
TRPC4AP
Human Description:
transient receptor potential cation channel, subfamily C, member 4 associated protein [Source:HGNC S
Mouse Orthologue:
Trpc4ap
Mouse Description:
transient receptor potential cation channel, subfamily C, member 4 associated protein Gene [Source:M

Alleles

There are 2 alleles of this gene:

Allele Name Consequence Status Availability
sa41839 Nonsense Mutation detected in F1 DNA Not yet available
sa11819 Splice Site, Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa41839
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000019450 Nonsense 531 774 14 19
ENSDART00000128126 Nonsense 3 246 3 8
Genomic Location (Zv9):
Chromosome 11 (position 26106888)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24935713
GRCz11 11 25173329
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTGAGAGCTTTCTGAGAGGAGCCACATCATATGCAGACCAGATGTTTT[T/A]GCTGAAGAGAGGCTTGCTGGAGGTGAAGATCTTAATAGAACACATCAGAG
Long Flanking Sequence:
AACTCTGGGAGTCGATTTCTGAGTTCCAGTAATGGGTTCATTGACAGTTAAGGAATCAAGCCTTTTGGAGTCGACTCCCAACTTCAGAAAATTAGTTAACATTAGGGATTGGAACATAATTCTCAAGCTATTTTAAACAGATGTCTTTAATTTATTTTTTTTTTAAATGCACAAATTAGTTGTTGAATTTCTAATATATATTAGCCTTAATCATTTGCTTTCAGAAGGCAAATATTGTAATGCATCATGTCTGTGTTCTCTTGAAGGAGTTTAGTGTGTGATGGTAAAAAAGGGCTCCTCACGCGGCTCCTGACAGTTATGAAAAAAGAACCCCCAGACTCTTCCTTCAGGTGAGACACTAGATTTATAACAGTGTGTCTAAAGTTTTTTGCAATAACACATGAATAACGGCGACATATTTTCTCCCTGAAGATTCTGGCAGGCCAGAGCTGTTGAGAGCTTTCTGAGAGGAGCCACATCATATGCAGACCAGATGTTTT[T/A]GCTGAAGAGAGGCTTGCTGGAGGTGAAGATCTTAATAGAACACATCAGAGTGTCTGTATTTGGTTCGCAGAACTGGATGAGTCACTGAAATGTTGTCTTGTGATTGCAGCACATCCTCTTCTGCATCATTGACAGCGGCTGCAAGTCCAGAGATGTCCTGCAGAGCTACTTTGACCTGCTCGGGGAGCTTATGAAGTTCAATATTGATGCCTTCAAGAGATTCAACAAATATGTGAACACAGACGAAAAGGTACTTGTAGATGCTGTGGTATTGGAAAAAACTAAGGCTGTTGTTAACATTATGTGCTTGACTTTGTTGCCTCTTTTAGTTCCAGGTGTTCCTCACACAGATCAACAGCTCTCTGGTTGACTCCAACATGCTGGTCCGCTGTATTGTGCTCTCGCTGGATCGCTTCGAGAGCCAGACGGAGGATGTGAAAGGTGAATTCAGACACAGTGCTCTTGGATTGTTATTGAAAGTAATCTAAAATGTACAGTAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11819
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > T
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000019450 Splice Site, Nonsense 660 774 17 19
ENSDART00000128126 Splice Site, Nonsense 132 246 6 8
Genomic Location (Zv9):
Chromosome 11 (position 26110083)
Other Location(s):
Assembly Chromosome Position
GRCz10 11 24938908
GRCz11 11 25176524
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGYCCTTTCTTTTWAGGCTGGTCAACATCATCAACGTGCAGACCCTCACA[C/T]AGGCAAGACCACAGTGCACATCTTCTCCACCTGTTTGCCTCATTTCAGTC
Long Flanking Sequence:
TACCCCATTTGAAATCATTTCAATTAATTCTGCGGATATAATAGTACTTTTTTTTCTTAAAGCGTTGATATATATATTTCCTTGTTTAAGCTTTTGTCTTTAGTGCATGGAAACATTAAAATAGTTACATTGCTTTTTCATTTTAAGCATCCATGCACTTCAAATATGTCATAAGTGTGTAGTGTAGTAAAGAAAAATCATATGGAAATTTGCTTTAACTAGCTTTCTTGGGATTTTCTTTAAAAATCTGCTTGCTTTCAGTGATGTTGTAAATGGCTTAATCAGATGGATGGTCTGTCCAGAGCATTAGACGTGCATGTTTTCCTGGAAAATATTCTACTGGAAATAATGGCGTTGTCTATTTTGGTGGGTGTTTTTGCTTCTCTGCAGTGGTTGAAGTGCTCTCCGAGTGCTGTCTCCTGTCCTACATGGCTCGAGTGGAGAACAGGCTGTCCTTTCTTTTTAGGCTGGTCAACATCATCAACGTGCAGACCCTCACA[C/T]AGGCAAGACCACAGTGCACATCTTCTCCACCTGTTTGCCTCATTTCAGTCCTCTTGTGGTAATTATTCCTGTTTTTCTGGCTGCTATCCCAGGAGAACGTGAGTTGTCTTAACACCAGCCTGGTGATTCTGATGTTGGCCCGGAGGAGAGGCAAGCTCCCGTTTTACCTGAACGCCCTGCGGGAGAAGGAATATGCAGAGAAATATCCTGGATGCCTGCTCAACAACTTCCACAACCTGCTGCGCTTTTGGCAGCACCACTACCTCAACAAAGACAAGGACAGCACCTGCCTAGAGAATGTGAGTATTTGTAGGGTTTGGGGAACTCCGCACAATTTAGCAAATCGCAGTATGGATGTTTGGTAAATACATGTGCTACTGGTTTACCTTATGTGCTTCTTGTAAGCAGTAAACCAAATGTGCTTGAAAAGTAAAGTTGAAATCTTCACCCCCTGGTGGTGACCTGCAGTATAGGTCATATTTCTAGCCCTCTCCATGTAA
Associated Phenotype:
Not determined