ZMP
cthrc1b
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate collagen triple helix repeat containing 1 (CTHRC1) [Source:UniPr
Human Orthologue:
CTHRC1
Human Description:
collagen triple helix repeat containing 1 [Source:HGNC Symbol;Acc:18831]
Mouse Orthologue:
Cthrc1
Mouse Description:
collagen triple helix repeat containing 1 Gene [Source:MGI Symbol;Acc:MGI:1915838]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11817 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11817
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000023958 | Essential Splice Site | 113 | 233 | 3 | 4 |
| ENSDART00000147072 | Essential Splice Site | 74 | 194 | 2 | 3 |
Genomic Location (Zv9):
Chromosome 16 (position 50672788)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 47526863 |
| GRCz11 | 16 | 47461949 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGTGTGTTTTGTTCCTCAGACTGATGYGCTGGGCTGTGTTTGTGTCGTC[A/G]GGAGTGCACGTTCACTAARCAGTATGCAGACAGTGCTCTGCGTGTGCTGT
Long Flanking Sequence:
TCCACACATCCACACACACATTTACACCCACACTCATACACTACGGACAATTTAGCCTACCCAATTCACCTGTACGGCATGTCTTTGGGCTGTGGGGGAAACCGGAGCACCCGGAGGAAACCCACGCGAACGCAGGCAGAACATGCAAACTCCACACAGAAACGCCAACTGAGCCGACGCTCAAACCAGCAACCTGTGAGGCGACAGCATTACCTATTGCGCCACTGCTTCGCCCTTGACTTCTTTAATAGAAAAAAAAAAACAAATACCATGGAAGTGAATGGTTACAGCTTTCCAACCTTTTTTTCAAAATATCTTCTTTTGAGTTTAACAGAAGAAAGACACCTCTGAGTGTTTGAAAAGTAAAGGGTGAGTAAATGATAACAGAAATGCCATTTTTGGCTGAACTATCCTTATAAAGCCAGAAAGGCTGAGAGTACAGTAATGTGCGAGTGTGTTTTGTTCCTCAGACTGATGTGCTGGGCTGTGTTTGTGTCGTC[A/G]GGAGTGCACGTTCACTAAACAGTATGCAGACAGTGCTCTGCGTGTGCTGTTCAGCGGCTCTCTGCGGCTCAAGTGTAAGAACGCTTGCTGTCAGCGCTGGTACTTCACTTTTAATGGGGCCGAATGCACCGCTCCGCTGCCTGTAGAGTCCATCATCTACCTGGACCAGGGCAGCCCAGAGCTCAACTCCACCATCAACATCCACAGAACCACATCCGGTGAGGAGCTTATCATGTTTGGAAATTGTGCATTTTTCAAAATATTTCTGCAAGTTTTGTATCAACAAATGAGGTGAATATGTCTTTTTGTGATTCATAATTTTGCATAAATTAATGAAATGTTCATAAAAATATGTCCATTATAACTGTGATTCATCGTCTGCTTCCTTCTCTGATCCCACAAAGTCTCAGATAAACGTCACAAAGTCTCAGATAAACAGCTTTAATAGGGCATTCATTGACATATGCACACATGGGAAAACTAAATAAGCTGAGTTCATA
Associated Phenotype:
Not determined