ZMP
vps35
Ensembl ID:
ZFIN ID:
Description:
vacuolar protein sorting 35 [Source:RefSeq peptide;Acc:NP_001020688]
Human Orthologue:
VPS35
Human Description:
vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13487]
Mouse Orthologue:
Vps35
Mouse Description:
vacuolar protein sorting 35 Gene [Source:MGI Symbol;Acc:MGI:1890467]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa11695 | Nonsense | Available for shipment | Available now |
sa15228 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11695
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016105 | Nonsense | 53 | 796 | 3 | 17 |
ENSDART00000111590 | Nonsense | 88 | 854 | 3 | 23 |
ENSDART00000138800 | Nonsense | 53 | 108 | 3 | 4 |
Genomic Location (Zv9):
Chromosome 7 (position 44535170)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 41525470 |
GRCz11 | 7 | 41805543 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAACAAGCTGATGGATGCACTGAAACAKGCCTCAAATATGCTGGGGGAGT[T/A]GAGGACGTCCATGCTCTCTCCTAARAGCTATTATGAACTCTGTAYGTGTT
Long Flanking Sequence:
TCGGTTTTTCTGCTCCTTTTCACTTTGTTCATTGTCATCTGCTTTCAATTATAGTTTACAAACACAGAGGGTTTTCAAATAATTCCAGCGTGATGTCTGCATATTTGTAGTTCTTTGACTGGTATTTAAACTGATTCAAACTTTTGAAAAATGATTTCAGCCCACCACACAGCAGTCGCCGCAGGATGAGCAGGAGAAACTGCTGGATGAAGCTGTGCAGGCAGTCAAGGTTCAGTCATTTCAAATGAAGCGCTGTCTGGTGAGTTAACAGTATGCAAATTTCATTCCATCCATAATGTGTGCTAAACTGAATCCTGAGACCTTGTATTTCCCATAGCCGTGTTGAGCCTCTTGCTCTGAACAAATTGGAAAACAAGACATGATTTTTAAGTATAGACAGCGGAAGGTGTTGCTCACTCTTATTAATATTTATGCACTTTTTCAGGACAAGAACAAGCTGATGGATGCACTGAAACATGCCTCAAATATGCTGGGGGAGT[T/A]GAGGACGTCCATGCTCTCTCCTAAGAGCTATTATGAACTCTGTATGTGTTTGCGTTGCATTATTTGTTGAAAAAAAAAATACATTTGCACTTTTGAGTTTAACAGTACGTGTGTTAAAGAATAGTGTTTTGTGCTGTCAACAGCTTCTCTACATTAAATGTCATCTGTAGAGATGTCGTTTATTTACTCTCCTGAATTCCTGTTGTAGATATGGCCATTTCAGATGAGCTGCATTACCTGGAGGTGTATTTGACTGACGAGTTTGCCAAAGGTCGCAAAGTGGCTGATCTCTATGAGCTTGTTCAGTATGCAGGGAACATCATCCCTCGACTGTGAGTATCAAAAGTCTCTTTTCAGGAAAGTCTGTTCACTCAGTGACCATATTTGCAACGCCTCCAGGCAGCTATTTTGGGCATACAGATTCAAGTCCTATATGTTTCAATAGAGTGCATTAGAGCTCGCAGACTTTTTCAGCAGCACTTATTCTGGAAGTAATTTTC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa15228
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000016105 | Essential Splice Site | 456 | 796 | 11 | 17 |
ENSDART00000111590 | Essential Splice Site | 491 | 854 | 11 | 23 |
ENSDART00000138800 | None | None | 108 | None | 4 |
Genomic Location (Zv9):
Chromosome 7 (position 44510448)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 41500748 |
GRCz11 | 7 | 41780821 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCTGAGCAACATTCTGGACTACAACACCATAATCGTGGCCCAAGATCAGG[T/A]TTGTATCACATACGNTGCTTTAACCAGATKTGCTTATTTCTTTTMATTTT
Long Flanking Sequence:
TTGTCAATGAAGTTACCATATATGGTTCTTCACCTGATATAGGGTTAAAATATTTGTAAATGCTGAATTTGTTTTTCATGGATCATTTATTTAGCCACTTTAAACATCTTGGTGTGATTTTGCCACATAGCTGTGCTGCTTTGCCTGGGTTATATAAAAGCGTAGGTATGCGTAGGTTGGGAAATTCCTTTTATTTCCTTTTAAACTGCATATAACCACAGTAGTAAGGTCACTCATTACTACATTAGTGTTCCTGCTTCTGTTTGATTTCTTTCATGTGTTTTTGTGCAGCATTGCCACCAGCAGCGCGGTGTCTAAAGAACTGACCAGGCTACTAAAGATCCCTGTGGACACGTACAATAATATCCTAACTGTGCTCCAGCTCAAGCATTTCCCTCCGCTCTTCGAGTACTTCGATTATGAGTCACGCAAAAGCATGAGCTGCTACGTGCTGAGCAACATTCTGGACTACAACACCATAATCGTGGCCCAAGATCAGG[T/A]TTGTATCACATACGGTGCTTTAACCAGATGTGCTTATTTCTTTTAATTTTCACAAAATTATGAGAATGTCTGTGAACCCCTACAATTTTTTGCTATCTTTTCAATATGGACATAAATTGATGTTTAAAAGTTTGGAATAGAGGACTGTGTGGGGCAGATTTTTTTTTGTTGTAGGTCCCGCAAGGTTTTATTCTGCATCCAGCCGCTCTGGCTGTATATTCAGCCTTTGTTCACCCGTTGCCCACTTATTATAAGTTTCTGCCCAACTGACCGTTCCTGCTAAATTTAGATCTGGTTTTCAAAATCTCACTTTTAAATTGGGCACTACCAAAAGAGAGAGATACCAGATAAAACTAAAGGTTGTGTAAGGATTGTAGGCTAAATGTTAGTTTTGTTTGCCTCTTTGGGATGAGACATGAGTGCCGCCTTAAACATGAGGTTCTAGTCTTGTGACTGCTAAAGGGTAAAACTTTAAGGTATTATCAGGCAAAAGGTAATTT
Associated Phenotype:
Not determined