ZMP
lfng
Ensembl ID:
ZFIN ID:
Description:
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe [Source:UniProtKB/Swiss-Prot;Acc:Q8JHF2]
Human Orthologue:
LFNG
Human Description:
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:6560]
Mouse Orthologue:
Lfng
Mouse Description:
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase Gene [Source:MGI Symbol;Acc:MGI:1095413
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11643 | Nonsense | Available for shipment | Available now |
| sa721 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11643
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000028673 | Nonsense | 20 | 374 | 1 | 8 |
| ENSDART00000138280 | None | None | 164 | None | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 41912453)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 41775813 |
| GRCz11 | 3 | 41917671 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ACATATCGCGGAAAAGTCGTGGTCTCTCTTGCGGGAGCCACCKTCACCTG[T/A]CTGGGGTTTCTGTTGTTTCTCTCGCAGCATCAGCGGATTCAGGCGGACGG
Long Flanking Sequence:
CATTTGAAGCATGCTTTGCATAAATATTTACAAATCTGCACACCCTGCTCCTCCTGATAATGTGCAATTAACACCAGTTAACAGCACAGACAAACACACAGACAGTTTTAAAAAGCATGCTTTTTTTTTTTTTTTTTTGGAAATGTTTACTCCTGTTCGTGCTCTTCACCTCCCCCCTCTTTGTCCCTCGCCTGCTGTCCTTTGACGCGTCCTCCTATTGATAGTCACTCCGCGGTTCCCACAGCACAATAGCCATCAACGCCCCGCCCACTGGGCGTAACCAAAGCTGTGGGCAGTTTATAAAAGCCCCTCCGAGTGACAATGAGGAGACTCTCAGCGCTACTATGCAGCAGTCGGATGACACGCTTGTTTTTTAGAATAGGCTTTTGGAGGGAGGTTTAGATAAATGCTGTGTATATAAAAAAACATAGTTTATTGAACATGTTGAAAACATATCGCGGAAAAGTCGTGGTCTCTCTTGCGGGAGCCACCGTCACCTG[T/A]CTGGGGTTTCTGTTGTTTCTCTCGCAGCATCAGCGGATTCAGGCGGACGGGATGCAGAACGAGAGCGAGGTCGGGTTGCGCTCGCTCCAGAGTCTGGGAGATTCAGAGACTGATGATGGAGCTCAGCCTGAGCAGAATGCAAAGAAAGGATTCTCTGCTTATTTTTCCAAGCTGACCCGCAGCAGGAGGGAAGCGGATAAGCCCAGCGAGGCACCCGGAGCGGCGACAGACGCGCCGCCTGCGGAGGACATCAGCGCGGATGACATCTTCATCGCAGTGAAGACCACTAAAAAGTTTCACCGGTCCAGACTGGATCTACTTCTGGACACCTGGATCTCCAGAAACATGCGACAGGTATACACGGTTACATATTGTTTCTAAATCTTGTTGCACATTTTGGTTTGCTTAGTTTGTTAAAAAAATCGTCTGCGTTAGAAAAACTAGTTTTAGTTATGAATTTAGCCATATTTACATGTTTAAATAATTTTACACTGTTTTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa721
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000028673 | None | None | 374 | None | 8 |
| ENSDART00000138280 | Nonsense | 31 | 164 | 1 | 4 |
Genomic Location (Zv9):
Chromosome 3 (position 41916984)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 41780344 |
| GRCz11 | 3 | 41922202 |
KASP Assay ID:
554-0629.1 (used for ordering genotyping assays)
KASP Sequence:
GGTGCAGTGATTCACTGATGAACTTGTGTGACTCTGYTGAAAAAGCTAAC[C/T]AGGCTTTCTCTTTGTTTTCACAGACATACATCTTCACAGAYGGCGAGGAT
Long Flanking Sequence:
ATGTATTCATCATTCTGAGTATGTCCGGGAGAATGGGACCTGGTGCTTCTTTCTTTTTTCCAAATGACTTGGCCATTCTTTCTTTGGGACGTTTTAACATGTCTGAAGTGGATAGAGGGTCGAGGAAAGGAAAGACTTGGGAGGTGTTCAGGGGCAGTGGAATGGGGGTGGAGGGTTGGGGGGAGGATGGGGGTAAGTGGGGTGGTCTGCTCCCCGCTTTGTTCTGGGCATGGGATGCTTTGGGGTGCAGAGCAGTTGCCATGGAGAAATTGACAACAAGAACAAGAGGCCTTTATTTTGGGGGGTAGAGTTTGGCTTGTTTAACTTGCTAAGTTTTCCATGGCGTAAAACCCAGACAATGGTTCCCAATCAAGCCGCTTGGTATAAATAGCTCTTGAAGACACACGATTCCAGTTTGGAGCTTGTCAGTTCCTGTTTCGTCTTTGCTATGGTGCAGTGATTCACTGATGAACTTGTGTGACTCTGCTGAAAAAGCTAAC[C/T]AGGCTTTCTCTTTGTTTTCACAGACATACATCTTCACAGACGGCGAGGATGAGGAGCTGAAGAAGAAAATTGGTGAGTCCAACTTCCTCAAGCGAAAGTCACAAGGCTAGAAAGAAGCAGCCATTCCTTCTTTGATATGTGCATAGTTTGGACGCAGCCTCCTAATCCTCTTAAAAATCTTGTGCTTAGCTAAAGGGGGGCTGGCATATTTCGAGAAAGATGGTATTAAGTCACCTGACTTCTCAGATGATGGGCATTTCTCAAGTGAGACGTATAAGTGGAGCATTACATGATCATTGACAGAACCTGTCCTCTTGTCCACACAGGAAGCCATGCTATCAACACCAACTGCTCTGCTGCCCACAGTCGCCAGGCTCTGTCCTGCAAGATGGCTGTTGAATATGACAAGTTCATTGAGTCTGGAAAAAAGTAAGCATGCATGAATAATGCCACATCATAAGTACTTGTTTTAGCATCAAAGTGAATCACATTGGATGTTC
Associated Phenotype:
Not determined