ZMP

si:dkey-5g7.3

Ensembl ID:

ENSDARG00000042859

ZFIN ID:

ZDB-GENE-041001-177

Description:

hypothetical protein LOC563356 [Source:RefSeq peptide;Acc:NP_001020700]

Human Orthologue:

SLC5A6

Human Description:

solute carrier family 5 (sodium-dependent vitamin transporter), member 6 [Source:HGNC Symbol;Acc:110

Mouse Orthologue:

Slc5a6

Mouse Description:

solute carrier family 5 (sodium-dependent vitamin transporter), member 6 Gene [Source:MGI Symbol;Acc

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa11584	Nonsense	Available for shipment	Available now
sa537	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa11584

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000062904	Nonsense	230	619	7	16
ENSDART00000134819	Nonsense	236	625	6	15

Genomic Location (Zv9):

Chromosome 20 (position 36679101)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	36751614
GRCz11	20	36654493

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CTTTCATTCATTGTTTTGTTGACCGCATGGCAGTCTGAACCCTGACCCTT[T/A]AGAGAGGCACACTTTCTGGACCCTAGGAGTTGGAGGTGTTTTTCTCATGC

Long Flanking Sequence:

GCAGCTTAGTTCAATATGATAATATGATATACTATTCTCCGAGTTAGAAAGAGCTTTATTGCCAGTACACACATTTACACAAAAAAGAAGTTTGTTTTCATGATGGAAATTTTAAAGTTAAAAGAAAAAATTAAAAGAAAAAGATGTAGAAAAAAAATGTATTACAAAATAATCTTCAACAATTAACTGCAACACGAAAATTCAATATAGTCATAGAGTAAGTATTTTAAGATCACTACTTGGAAAAAAACATATTTATTTATAAAGTCAAAGGGGTTTACTTGTATGGTGAGATACTAGTTCACTAGTAAATTGGGATTACATGAATAAACTGATTTTTGGGAGTGTTCATGTACAATACTGTAAATGTGCTCATTGAATTTTTAAGTGAACTGCTACTTTAAGATTATGTAGGACACACTGATCCACATACCAGGACTGCAACTGAAGCTTTCATTCATTGTTTTGTTGACCGCATGGCAGTCTGAACCCTGACCCTT[T/A]AGAGAGGCACACTTTCTGGACCCTAGGAGTTGGAGGTGTTTTTCTCATGCTGGCCCTGTATGGAGTGAACCAGGCTCAGGTCCAGAGATACCTCAGCTCCCGCACGGAGAAAGAGGCCATCATGTAAGAAAACACCCAGCCCATCCTCATGATGGTTAATTTAATAGAGACTATAAACTTATTATATACACCATTCATGCTGTTTCTGTTGTGTTGTGTTAAGAAAGAATATAACTATGTTATGTTGTTTTCAACTGCCTCTCTGTTTTTTTTTTTCATGAAGAGGCCTGTACATTGTGTCTTGTTCTCCAGGTCCTGCTATGCGGTGTTTCCTTGTCAGCAGGTTGTGCTCACATTGGGCTGTTTGATGGGTTTGGTTATGTACGCTCGATATGGGGAGGAAAGCCCTCTGGATCAGGGCTACGTTACAACTAATGATCAGGTCAGAAACAAATAAAAATATGGTAACACTTCAGTTTAAGTCACAATTCTATTAACTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa537

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000062904	Essential Splice Site	314	619	8	16
ENSDART00000134819	Essential Splice Site	320	625	7	15

Genomic Location (Zv9):

Chromosome 20 (position 36678658)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	36751171
GRCz11	20	36654050

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

ATGGGGAGGAAAGCCCTCTGGATCAGGGCTACGTTACAACTAATGATCAG[G/A]TCAGAAACAAATAAAAATATGGTAACACTTCAGTTTAAGTCACAATTCTA

Long Flanking Sequence:

ACTGAAGCTTTCATTCATTGTTTTGTTGACCGCATGGCAGTCTGAACCCTGACCCTTTAGAGAGGCACACTTTCTGGACCCTAGGAGTTGGAGGTGTTTTTCTCATGCTGGCCCTGTATGGAGTGAACCAGGCTCAGGTCCAGAGATACCTCAGCTCCCGCACGGAGAAAGAGGCCATCATGTAAGAAAACACCCAGCCCATCCTCATGATGGTTAATTTAATAGAGACTATAAACTTATTATATACACCATTCATGCTGTTTCTGTTGTGTTGTGTTAAGAAAGAATATAACTATGTTATGTTGTTTTCAACTGCCTCTCTGTTTTTTTTTTTCATGAAGAGGCCTGTACATTGTGTCTTGTTCTCCAGGTCCTGCTATGCGGTGTTTCCTTGTCAGCAGGTTGTGCTCACATTGGGCTGTTTGATGGGTTTGGTTATGTACGCTCGATATGGGGAGGAAAGCCCTCTGGATCAGGGCTACGTTACAACTAATGATCAG[G/A]TCAGAAACAAATAAAAATATGGTAACACTTCAGTTTAAGTCACAATTCTATTAACTACTGGCTTATTACCGGCCTATTATTGCAATATTAATTGTTTTTAGTAGTTATTAATTATGATATTATTCAACATTCTTAATTCTAAACCCAACTTTTACTTTACTAACTATTAACAAGCAGCTTATTAGCAGTTTATTGAGATAATAGTATTAGTTAATGGTTTTTAATAGCATAAATCAAAGCTAAAACCCCAAAAATATATAATACTTTTTTATATTTGTGGGTCAGTATTTTTATTTTCCTCCATTAATTCAGCAAGGATGTATTAATGACTGGCTTTTGATTGGCTGACATGCTAGGAACCACTTCTTACACGGCATCCTAAATGGCCAGCATACAAACAAGCACATTTTATGGGAAGAAGAGAGACATGTAAAATGCTTTTCAAATGTTTTTTACTACAATTATTACATATATATATATATATATATATATATATATAT

Associated Phenotype:

Normal

Stage	Entity	Quality	Tag
Larval:Day 5 ZFS:0000037	whole organism ZFA:0001094	quality PATO:0000001	normal PATO:0000461