ZMP
shroom4
Ensembl ID:
ZFIN ID:
Description:
Wu:fe05h01 [Source:UniProtKB/TrEMBL;Acc:B3DGK9]
Human Orthologue:
SHROOM4
Human Description:
shroom family member 4 [Source:HGNC Symbol;Acc:29215]
Mouse Orthologue:
Shroom4
Mouse Description:
shroom family member 4 Gene [Source:MGI Symbol;Acc:MGI:2685570]
Alleles
There are 7 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa34061 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa20931 | Nonsense | Available for shipment | Available now |
sa20932 | Nonsense | Available for shipment | Available now |
sa11547 | Nonsense | Available for shipment | Available now |
sa40883 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa38609 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa34061
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111542 | Nonsense | 51 | 1634 | 2 | 10 |
Genomic Location (Zv9):
Chromosome 7 (position 25938887)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 24500639 |
GRCz11 | 7 | 24771796 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTAAACTGTCTCTCCTATAGATAGAAGAGGGAGGAAAAGCAGCTCAGTG[T/A]AAGAAGTTGAGAGTGGGGGATGAACTGGTGAACATCAACGGCTCTGCTCT
Long Flanking Sequence:
GTATGTTTTGACTGGGGTAATATTTTGTGTATGGGAATTACGTGGCTCTCAGAGCTGATCTTTGACTCTTTGTCCTATTTTATGTAGGAAGGCTCCCTAATGGAATAACTTGGTATTGTGTGTCTGTACGCGTGTTTGATGAATGGCTGTGAACTCTGTACATTTGCAACTTTGTATATATATTTGACTTCCGACCCGTCTGCCCCATGTTTTATAAAGAGGAAGTGGATATGAAATGAACAAGACTGTGTGTGTGAATGTGCTTATCTGTTATTTTTGTCAATGTGTGTGTTGTGCTTTTCTGATTTAAGCGTTTAACCTCTTTTAAGAAGAAAATCTGTATTATAAACAGGCCTATTATTGTTTTCCCAGAAGACCTCAGAAATGTTTTTCCTCTGTGGTTTTGTGTGGACATATGTGGGTCGGACATATTCAAACATGATGTTTAACCTTAAACTGTCTCTCCTATAGATAGAAGAGGGAGGAAAAGCAGCTCAGTG[T/A]AAGAAGTTGAGAGTGGGGGATGAACTGGTGAACATCAACGGCTCTGCTCTCTACGGCTCACGGCAAGAAGCTCTCATTCTCATCAAAGGTTCCTACAGGGTTCTGAAGATCATCGTCCGAAGGTAAGCAAACACACAAATGTGTACTGTAAGCTGATTCGAGGTGATGTAACATTTACTGTTGCTGATTTAGAATTGAAACATCTGTAAATTCAAGCAAGGACAATAAACGATGTACTTCTTGGTGTACAAATCTTCACTTAAAGATGCCATATAGAGGAATTACCAACCTACGTCACACATGACGCCACACGGGTTCCCAGTTGCAAAAAAGACAGGTTGCAATAGCAAACGTGTTGTGTTGTGTTGTGCGGTAGGTTGCCAAATCTGATAGAAAACTTAACTTTTACCGTACACCACACTGCTTTTAATGCCAACCGCAGATGTCTTTGGCTAAAAAGGAGCTGAATGTAGTGAGGACCTAATTAAAAATGCTTGACT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20931
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111542 | Nonsense | 357 | 1634 | 4 | 10 |
Genomic Location (Zv9):
Chromosome 7 (position 25961491)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 24523243 |
GRCz11 | 7 | 24794400 |
KASP Assay ID:
2259-8799.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATACAAGACAGTGAGCCAGAGCGTAAAGGGTGCAGCATTCAACCTTATTA[T/A]ACCTTGAACTCAGACTCAGGTGGAGATGGCAAAGCAACTGACCATGAGAA
Long Flanking Sequence:
GTCATCTTTAACAACAAACGTGACTCTGCTTACAGCTCTTTCTCAGCCAGCTCGAACACATCTGATTACACAGTTCCTGTCAAACCTGAGGAGACCAATTCCATGGACAGTCTTCTTCAGGGTTTGGGTTCTTCCTGCAGGTATCCAGACAGAGGCCAACACTCGGCCCCCACTGGCCATGGAAACCAGCTGGAAGAACAAGAACACTCCAAGGTGCTGTCTGGCAGATCCGAGCCCAAAGTCCGACCATCGTCCTACAGCTGTGAGGAGGAAAACTGTGCACCACCACAGCCACCAATGAGGAAGGAGAGTTTTAGGGCTACTAGAGGCCAAGCAACAGATAAACGCTGTGTGTCTGCTCCTGTAGGCATCCCAAATGTAAGCAGTTGCACGGATGAAGATCAATCCCAAATCCAGGATGTTTTGACTGGCAGAGTTTATTTGAACGGAATACAAGACAGTGAGCCAGAGCGTAAAGGGTGCAGCATTCAACCTTATTA[T/A]ACCTTGAACTCAGACTCAGGTGGAGATGGCAAAGCAACTGACCATGAGAAAGAACACTTGGAGGACTATTCAAAATCTGTGGCAGCAGCATCTTCACCTCCTTCACAAAGGAATAGGGATGAGAACTTTGATACCAAACTCCGACCTGAACATGATCTCCAGTCAGCAATGAACCGACATAGTGCACCTGAGAAACTTCTAGCTGCTCAGTTGTGTATGATGGATGTTTCTGCTGACAAAAGTGATCATAGTGCATCTCCAACTTGCCAGTGGTCACAGTCCCCTCTTTATCTGAGTGATTCCAGTCAAAATACTGAGCAGGGCAAGTGGGGAACGAGCAGATGCTCTACACCTGGTTCGGTCGCAACTTCGGAAGTCGAAGATCCCAGACTAGAGGAGGAATCTATTGATGGACAGAATCCATGGGGGCATCCTATCAGTTTGTCTGGGAGTCCCATTGGAAATGGATTCTCTCAGAACAGTGAGAACAATGGAGGAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20932
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111542 | Nonsense | 842 | 1634 | 4 | 10 |
Genomic Location (Zv9):
Chromosome 7 (position 25962944)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 24524696 |
GRCz11 | 7 | 24795853 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGAGGGAAAGAGAGCAGGAGAGACTTAAGGAGCAAGAGAAGCTTAGAGAA[C/T]AAGAAAGAGAAAAGGAGAGGTTAAGGAAAGAGAGGGAAAATGAGCAACAA
Long Flanking Sequence:
GGCGTTGGACGCCAGAACGCAAACTTGAACTCGAAAATGAATCATCTGAAAGTAAGAGGAATGAGACTATTGGACAGATGTGGTCTGGAAAAATGGAATCAACAAGAAGTAGGACGAGTTCATCCAGCGGTCGTTTAGGTCGATCGGATGACTGTGACATCCTTCCCTTTGCAGATCGCAGGAGGTTTTTTGAGGAGACTAGCAGAAAGTTGAGCCAGTCTGTAACAAATTTATCAAACCTGACAAGTCGAAGTCAGAGACTAGACAAGCCGGGCAGAATGAACCATCCATCATCACCTGAACCTCATGAGATTGCTGCTCACCTTGGCCGTAGGAGATTCTCATATCAAGATGTGCCCTACATCAACTCACTGGACAATGGGAGACAGTTTATAAGTAACCAACAAGACCAGGAAAAAACGAGGCAGAGGCTGATTGAGAGAGAGCAGGAGAGGGAAAGAGAGCAGGAGAGACTTAAGGAGCAAGAGAAGCTTAGAGAA[C/T]AAGAAAGAGAAAAGGAGAGGTTAAGGAAAGAGAGGGAAAATGAGCAACAAAGGCTGAAGGACTGGGAGGAACGGCAGAGGCTGCTACAGAGAGAACAAGAATGGGAGTCTGTGAGAGAATCTGTTCACTCTGAACACAATACGAGCAGTGACACAGTTCCTCACTCTTTATCTCATGACGTCTATCGGAAGCAGCCGCCTAGTCCTCAGATTCCTTCCTCTCTGCAAATGTCTGAACCTTTATATAGCAGCACTACCACCAACGTCCAAAAGCCTTGCTCAGCGTTCCACCCTGTGACCACCCAGCACAACCGGTATGATGGCTACCAAGTAAATCCACCCTACAATCCCAGGAACTACACCCCAGATGAGGTAAGACTGAGGATTTAGCATTGTCCAAAACAGAAATTGGAAAGTTTTTCTGATTAGGCTCTGAGCCCAAACAAAGTGTTTTCAATTTAGAAATGCCAGAATTTCTAGGCCCTTTCACACCAAGCACAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11547
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111542 | Nonsense | 968 | 1634 | 5 | 10 |
Genomic Location (Zv9):
Chromosome 7 (position 25967377)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 24529129 |
GRCz11 | 7 | 24800286 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TAGTTWTTTTGTTKTTTAAAATATRSCAAATATATTTTACAGGCCCAGTA[T/A]GTTCGGGAACAGGAAAAAACKAGAAARATCAACAGAAACTTCAGCTTAAC
Long Flanking Sequence:
AAGAATATTCAGAAAGCAACTCATGTAAACAGCTTAATCATGTCATTGTATAATTCAGATTAAGACAAATAATTTGATTACTGATGTCCATGTAAACATAGTCATTGATAATAACATTTAATCAACATTTAAATTCTTTAATGGAATCAGCTAAAGTGGATTGTTTCAGAAGACATTATATTGTCAATTATATTGTGTGCGATGTGTGAAGTCCTGTGGAATGCTAGTCAAAACCCTCATGGTGCGCTTCTGATTTGGCTCTTCAGCTGGCAGAAATACTCAAGTTAATTTTCTTATTGGGTCGATTAAAATTAAATTAAAAAGTGATCATTTATCTACTGATACTAAGATATAAACCAATGTATCATGAAAAAAAATTTAATTGCATTAATATTTGTATAAAATTGAAACTTTGATAAATGTATACAAGTTTTTCTTTTTTTTTTTTTTTAGTTATTTTGTTGTTTAAAATATAGCAAATATATTTTACAGGCCCAGTA[T/A]GTTCGGGAACAGGAAAAAACTAGAAAGATCAACAGAAACTTCAGCTTAACAGAGAGGTAAGATTTCTGTTTTTACGTAAGACGTGGACTTACATAAGTGTTGCAATTTATTACCACAAGAAGTAACAAATATATAAGCAACAACAAAAAAGAAAGCGTCTGATCATGTTGATGTTTATATGTTTGCAGTTCACTGACATTAAATTTAAATGACACAATAATCATTTCAAGAGTTCACACTTAGCTGATGATTGATAGAAAAGTGTGTTTGGCATGCTGTCCCAGGAGAGAGCCCTGAACCTAGAATATCCTCGAGCCCGGGGCTCCCTCCCATTTAAAGGCGAGAAGGGAGTTTGAGCTCAGGTAGGTCCCAAGAACCCCCCTGCTTGTAAACGTGTTATTAATAGCTGAGATATAAATGGCTAAGAGTTTGTCTTAAGATGCTACTTTGAAGTAGTGCTTAAGATGCTACTTTGAAGCAACCACAGGGAGCACATGCAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa40883
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111542 | Nonsense | 1449 | 1634 | 8 | 10 |
Genomic Location (Zv9):
Chromosome 7 (position 25975028)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 24536780 |
GRCz11 | 7 | 24807937 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGCTTAGAGAGATCTCAGAGAGGAAAGAGGAAGATGAGGAGCTCAATTA[T/A]AAGGTGAAAGACCCATCATTGTATAATTCACTTGTTACATTCTTTGTGAA
Long Flanking Sequence:
TAATTTTTTAGGAAAAAATATATAAAAAGAAAAACCTAAAAAGAATGAGACTTTCCCCAGAAGAAAAACGTAAAAAGGAATACTGTAAAAAAAACTTCTTACTCTGTTAAACAGCACTTGGAAACAATTTTAAAAATTACAATTTTGCAGGACGGCTAATAATTATGTGTGCGTTTGTATGTCTGTTTTTCTTTCCATTTGGCTGCAATCTCACCTGTCCTGCACAATATACAACAGTAAATTAGGAGAAAGTTTGGAACTAATGAATTTTTTTCTTTTCACATTTTCTTAACATGTTTTTCTCTTTGAGTGCCATAAGAGGTCATATCCAGTATTCTGTTTTAAAAGATATATTTCTCTCCTAGACCCTCCAGACTGAATACCACAGCGCCACAAGTATCACGATCCACCTGTTATGACATATCAGCAGACAACCCACAGCTTCTCGCCAAGCTTAGAGAGATCTCAGAGAGGAAAGAGGAAGATGAGGAGCTCAATTA[T/A]AAGGTGAAAGACCCATCATTGTATAATTCACTTGTTACATTCTTTGTGAATATGCTGAGTGGTCTAGATTCAGTATATTTTCACTTTTGGAAAAATGGCCTTAAGGTTTTATGCACGTAATTATATATGTGAAAGTTTGTATGTGCATGTTTCATTTCAACTTTATGTATGTATGCTCACAGTTTTTTCGCATAAATTATATCAGTATGAATTATATCAATTTGCATGAAAAAATAGAAGTGTAGTGCATCTAAAAACAATTTAAATTATATTTGCATTTTATTGTATTGTATTTTATATAAAACAGTAATATTTTAAAATCTTATCTATAAAAATAATTATATTTTTAATATTGTTGTCCTTAATATAATCATCCTCAAAGTATTTTGTTTAATTATCAGTGTTAAAAACAGAATCATTTTTTTCTGAATTATTTGATGACTGGAAAGTTGAAAAGAACATCATTTATTTAAAATTTTCATGTTTTGCAACTCTCCCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38609
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000111542 | Nonsense | 1584 | 1634 | 10 | 10 |
Genomic Location (Zv9):
Chromosome 7 (position 25978653)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 7 | 24540405 |
GRCz11 | 7 | 24811562 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCGCGAGCAGGCCGTCTGCAGAGTGCTGGGATGCTGCCTGACCCCAGAA[C/T]AGATGCGGGACTACGGTCACTTTGTGAAGATGAAGGCGGCGCTACTGGTA
Long Flanking Sequence:
CTACCAGAGGGTGCTCAACCTGCAGTCTGTGTGAGTCTTAATGCCTCAGTAAAGTGAAGGAGACACTATACTGTTAGTAAGCGCCGTCTTTCGGATGAGACGTTAAACTGAGGTCCTGACTCTCTGTGGTCATTAAATATCCCATGGCACTTCTGGTAAAGAGTAGGGGTCAAACCCTGCTGTCCTGATTAAATTTCAACCATCGACCATCCCCTAACCGAATTGGCCCTATCACTGTCTCTCCACTCCCCCTATAGCTGGTGTGTAGTGATCCCCCCTCATGATTCTGAAGCATTTTGAGTGCAGACACCATAAATGCACTATATGAATACACTTTACATTACATTAACATGTTTGTCTTTCTGATGTTCCAGCTCCAACTCCTGGAGAAGAAGAAGCAGCTGTTGGTTCAGATGGGAGAGGCGCAGGAGCTGAAGGAGCACGTGGACCGGCGCGAGCAGGCCGTCTGCAGAGTGCTGGGATGCTGCCTGACCCCAGAA[C/T]AGATGCGGGACTACGGTCACTTTGTGAAGATGAAGGCGGCGCTACTGGTAGAGCAGAGGCAACTGGATGACAAGATACGGCTCGGCGAGGAGCAGCTCAGGGGACTTCGAGAGAGCCTCGGCCTGGGTTTTGGGATGGCGTATGGCCATTACTGAGAAGTGCTTTAAATAATACATGAGTGGGACCAAAAGGATTTTGTACTGCAGTATACTTCCAAGAATGGACATGACAATGACACAACAGTTGAACGCAGAAAAGCACAGCAGGTGTTCAGTTTAAAAACACTACATCCCTACTTGAAGTTTGTTTGTTTGTTCTTTAGCTGCACTAGTATCTGTTCATTTTGTCGCGCTTACTCTGTTAACCTCAGTCACTACCAAAGAACGCATGTGTGCGTATACTTCTCGTTAAATACAGCAGGGGGAGTGTCCATGCACTGCTATTTATTTATTTATGTATATATTCATGCATACAATGTGTAATTCTCTCTGGCAGTTCAC
Associated Phenotype:
Not determined