ZMP
ckap5
Ensembl ID:
Description:
Microtubule-associated protein 215 short isoform [Source:UniProtKB/TrEMBL;Acc:D3W653]
Human Orthologue:
CKAP5
Human Description:
cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:28959]
Mouse Orthologue:
Ckap5
Mouse Description:
cytoskeleton associated protein 5 Gene [Source:MGI Symbol;Acc:MGI:1923036]
Alleles
There are 8 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11488 | Essential Splice Site | Available for shipment | Available now |
| sa6795 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa24594 | Essential Splice Site | Available for shipment | Available now |
| sa9797 | Nonsense | Available for shipment | Available now |
| sa24595 | Nonsense | Available for shipment | Available now |
| sa457 | Essential Splice Site | Confirmed mutation in F2 line | Not yet available |
Mutation Details
Allele Name:
sa11488
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045607 | None | None | 134 | None | 19 |
| ENSDART00000123666 | None | None | 990 | None | 21 |
| ENSDART00000127575 | Essential Splice Site | 326 | 2033 | 7 | 44 |
Genomic Location (Zv9):
Chromosome 25 (position 5003593)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 13683855 |
| GRCz11 | 25 | 13780255 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAAAATTAGAGAGTGGAGACTATGGGGACCTGGWCCGAGCACTAAAAAAG[G/A]TAGGAGTCTTAGTGAGATTTTGGTTAATAGGGTAATCTCTGTAAGACCAA
Long Flanking Sequence:
ACACTGAAGCATTTGCTTATACATCTAGCTGTTATTATGACTAAATCCGGTTTTAGGAAGCTATTAAATTGCGGCAGCTTATGTTTATATATCATTTAAAAAAACATTTTTAGAAATACATTTATTTTAATAGTCATTTTGGTTCAGTTTTAACTGTTTTGTTTCATTGATTGGATGCATTAATTTCTTCCTGTAGGAGACGATGAAGAAGTGGCTGAAGCTGTTCAGGTTGATGCTTACGAGCTCCTGGAAGCTGTTGAGATCCTTTCAAAGCTTCCCAAGGATTTCTATGAAAAAATTGTAAGTCAGAAATGAGTTCTGTTTACATGATCCTTGGATGCTGTTTGAACTACTTTATTTTGATGTTGTAACCTTCTTGACCACAGGAAGCAAAGAAATGGCAGGAGAGGAAGGAAGCGCTGGAAGCAGTGGAGGCTTTAACTAAAAACCCAAAATTAGAGAGTGGAGACTATGGGGACCTGGTCCGAGCACTAAAAAAG[G/A]TAGGAGTCTTAGTGAGATTTTGGTTAATAGGGTAATCTCTGTAAGACCAATAAGTAAAACGCTCTTTTGTTGTAGGTTATTGGGAAAGATGCCAATGTGATGCTAGTGTCCATGGCAGCCAAATGCTTGGCTGGATTGGCAACAGGACTGAGGAAGAAGTTTGGGACATATGCAGGTCTTGTAAGTGCTTTCATGGCTTAAATTGGCACAGACAATTTCACTTATTTTTTCCTAACTTATTTTGTTGCGTTTTTAATTAAAGTGCTGGTAATGTGTATTTTTAAAAAATATCTAATGTAGATGTTCTTCAGTGTAAACAGTCTGCAAAATTGTTAGTCAAACTGCATAAGAAATGTATATTGTGTCTTGAAAGTAAGAGTCAGCTCATAATCACGTTAAGTCATTACGTTATCAAATCTTTAACTGTTTACCGAGCTACGCCAACGCTATCAAAACAAATCTGCATAACCAGGCATGAACAGACCTTTTTTACAAGATGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa6795
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045607 | None | None | 134 | None | 19 |
| ENSDART00000123666 | None | None | 990 | None | 21 |
| ENSDART00000127575 | Essential Splice Site | 640 | 2033 | 15 | 44 |
Genomic Location (Zv9):
Chromosome 25 (position 5008431)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 13679017 |
| GRCz11 | 25 | 13775417 |
KASP Assay ID:
554-4048.1 (used for ordering genotyping assays)
KASP Sequence:
AGTCAAGATGCTGGCGAAGAAACCTGGGTGGAAAGAGACCAACTTCCAGG[T/C]AGTTCTCTTTAGTGTGATGCTGTTCATAGTTGTCTGATATTTGTTGTGGT
Long Flanking Sequence:
TCATGTTGCAGGCTGCAGGACCTCCCAAAAAGGGCAAACCTGCTGCGGCCCCGAGTGCAAAGTCCAAGAAAGCTCCAGAAACTAAGGAAATAATCGAGACCGAGTTATCTGTAGGTTTAAAATTTGACCTATTTAACCATTTTTATTCATCTTAAAAGAACGGTATAATGCAAAGTTGGTTATTGTGTGTTAATCAGCCTGAAGTGTGTGAGGAGAAAGCAGCCGCTGTTCTCCCAGCCTCCTGTATGCAGCTGCTGGACAGCGCCAACTGGAAGGAGAGACTTGCCAGCATGGAGGAGTTTCAAAAGGTCACTTGTGGATTTTTTTATTTTTCTCCATCTATTTGATAGAGATTTCAATTTGAGGGAACGTGCTCTAAACTTGTCTTGGTTTTCATTCTACTCAGGCCGTGGAACAGATGGACAAATCTGAAATGCCCTGCCAGGCTTTAGTCAAGATGCTGGCGAAGAAACCTGGGTGGAAAGAGACCAACTTCCAGG[T/C]AGTTCTCTTTAGTGTGATGCTGTTCATAGTTGTCTGATATTTGTTGTGGTGTTGATTTCCAATGTGCTTTCTTTGTTAGGTGATGCAAATGAAGCTCAGCATCGTGGGGCTAGTTGCACAAAAGGGCCAGTTCTCAAAAACGTCTGCACTGGTGGTTCTGGACGGCCTGGTTGATAAGATTGGAGATGTGAAGTGTGGAGGTAACGCTAAAGAGGCTCTCACTGCAATCGGAGAGGCCTGTTCTCTGCCATGGACTGCTGAGCAGGTTGGTGGTTTAATCTAGCAAGAAATTATTAATAGATTAATATAATTATATAATATATTTATATGTATATTTATTTATTTATTTATTTATTATAAATAAAGGTAGTTGTTTGTTTTCAGTTTTACAGTTACACGCTCCGACTAAAAATAATAATATATTTGACAAGTAATCACAAAATCAATAATTTATTATTAATACACATCTATTATAATTTTACTCTTAATTGGGCTTTAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24594
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045607 | Essential Splice Site | 60 | 134 | 2 | 19 |
| ENSDART00000123666 | None | None | 990 | None | 21 |
| ENSDART00000127575 | Essential Splice Site | 1123 | 2033 | 26 | 44 |
Genomic Location (Zv9):
Chromosome 25 (position 5017851)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 13669597 |
| GRCz11 | 25 | 13765997 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAAACCCGACACTAAGAAAGCTAAACCAGCAGGTCCTGCGGCTAAAAAGG[T/C]GTGGCACATTTCACTGTTTTCTGTTGTTGTAGGGAGTTGCTGCTAATAAA
Long Flanking Sequence:
ATTCTGTAATTGTGTTCCTGGGTCTCCACTTTTGCCATGACCTCTTTTGGCTTTAACATGCTTATCCCTCAGGTTTTTCCAAACTTTTTAACAAAAAACTTCCTTTTCCACTGCTGTTGCAATTTCTAGCCAAGAATTATAGGTTATCTGGTTATCCGTATGATCACGCATGGATGGATCATAAAGATGTCTGTACCTGTTTCAGACAAAAAAAAAAAAAACTCTTCAAAGTGATTCATATTAAGCTCAAATCAAACTGTTTGCTTGGGTCTCTAAAAATTTTGCGCGGTCGTCCAGCTGAAATCATGTCGTGCGCACCCAAAGCAAACCTTTTTTTTTTCTATTATTTTCAACAACTTGGAAAAAGTCTTGAATTACTTTAACTGTCATTTATTTTACAGCTCCAGCCAGGAATCATAGTCCCGTTGATGACTACAGTGAACCTGAACCCAAACCCGACACTAAGAAAGCTAAACCAGCAGGTCCTGCGGCTAAAAAGG[T/C]GTGGCACATTTCACTGTTTTCTGTTGTTGTAGGGAGTTGCTGCTAATAAAACAATCCAATCTGTGATCTAAATCATCCGGTGCCTAATACACAAGGGGCTGTCCATGAAAAGACAATGACAGTGTTCTTTCTCAGTTCAAAAATAAGCCTCTATTAAAAGTACATTTAAACGCTGGCCTAGTTTTCTGTGAAAGTCAAAAGACCATGGATTGGGTTCTGCATTTTTTAAGTGTTTTGAAATGTGCTGCGTCGTTTTCTGCACTAGAGCGAAAGCATGGAGCTCAAGGTGAAAGGAGAAAAAGATAATGCTAAGCAAAACAGGCTCTCAAGAGGGCCTCCTAGCAGTGAAAAGGTATATTGGAATCTCATATAGTGCACTACTGGAGCAGGTTTGGTGTGGAAGCACTGCATGTGGTGTTGTCATTAGATTCACAACGTTTCTGTCTTTGCAGTGATCTTTATTCAGTTGTAATGATTCAGTCCAATTTCAGCTTTTGAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9797
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045607 | Nonsense | 122 | 134 | 4 | 19 |
| ENSDART00000123666 | Nonsense | 171 | 990 | 6 | 21 |
| ENSDART00000127575 | Nonsense | 1214 | 2033 | 29 | 44 |
Genomic Location (Zv9):
Chromosome 25 (position 5020259)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 13667189 |
| GRCz11 | 25 | 13763589 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AGTGGAACTTCATYACTCCTCGTGACGAGTACGTAGAGCAGCTCAAAACT[C/T]AAATGTCAACATGTCTGGCCAAGTGGCTACAAGACGAGCTCTTCCACTTC
Long Flanking Sequence:
CAAATATTCACTTTAAACTTGATATATGCTAAGGTAACTTTATTGGAAATTTCTTAAATTCATTGTCGCACTGTGTTTTTGAACTAGTATATAATTTTACAAAGCAGAAATCGCAGAGCTCAGCAAACACTAAGCCAAAGAATCTAATATCAAAGAAGACTTCCCAACCTGAGCTAGTGATTCAGAGTACATAAAATGTTGTCCTGCCACTTTAGGTTGTTGCAGGAAAGAAACCTCCTGTTAAGGCTGGCGCAAAAGATGAGGAGGATAAGTCTGGTCCTATTTTCATCCTCGTTCCCAATGGCAAAGAGCAGAGAATCAAAGAAGAGAAGTCATTAAAGGTGAGCAGCGTCTCAGTGGTACTTGTGAATATTTGTCAACACTATTGAGTGGCATCTTTAGGCTCATCGTGTGTATGCGTTTGCTTACCAACTCTCCTCTAGATTCTGAAGTGGAACTTCATTACTCCTCGTGACGAGTACGTAGAGCAGCTCAAAACT[C/T]AAATGTCAACATGTCTGGCCAAGTGGCTACAAGACGAGCTCTTCCACTTCGACTTTCAGCATCACGTAAAGGCTATCGGAGCCATGATTGAGGTTTGTCATGTCAAAGCAGATGGCGAGTACGTAATTGCATCAAGCTGTACTACACTAATGTGTTTTATCTGTTATCCAGCACATGGAGGCCGAGTCTGAGGCTGTGATTGGCTGTCTGGACCTGGTGTTGAAGTGGTTTACTCTGCGCTTCTTTGACACCAACACTAGTGTGATCATGAAAACCCTGGAGTTCCTCAAGATGCTCTTCACCATGCTGAGCAGGAAAAACTACCAGCTCAATGACTACGAGGCCTCGTCTTTCATTCCTTACCTGATCCTTAAGGTAGAATTTATCTACCTGAACATTAACTATGAAGACAATTTGTTGAGAAACGGCCTGACGGGGTCCTTTTTTTTGCTTTCTTGTCTCTGAGCAGGTTGGAGAGTCTAAAGATGTTGTGCGCAAAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24595
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045607 | None | None | 134 | 5 | 19 |
| ENSDART00000123666 | Nonsense | 252 | 990 | 7 | 21 |
| ENSDART00000127575 | Nonsense | 1295 | 2033 | 30 | 44 |
Genomic Location (Zv9):
Chromosome 25 (position 5020583)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 13666865 |
| GRCz11 | 25 | 13763265 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCCTGGAGTTCCTCAAGATGCTCTTCACCATGCTGAGCAGGAAAAACTA[C/A]CAGCTCAATGACTACGAGGCCTCGTCTTTCATTCCTTACCTGATCCTTAA
Long Flanking Sequence:
AAGAGAAGTCATTAAAGGTGAGCAGCGTCTCAGTGGTACTTGTGAATATTTGTCAACACTATTGAGTGGCATCTTTAGGCTCATCGTGTGTATGCGTTTGCTTACCAACTCTCCTCTAGATTCTGAAGTGGAACTTCATTACTCCTCGTGACGAGTACGTAGAGCAGCTCAAAACTCAAATGTCAACATGTCTGGCCAAGTGGCTACAAGACGAGCTCTTCCACTTCGACTTTCAGCATCACGTAAAGGCTATCGGAGCCATGATTGAGGTTTGTCATGTCAAAGCAGATGGCGAGTACGTAATTGCATCAAGCTGTACTACACTAATGTGTTTTATCTGTTATCCAGCACATGGAGGCCGAGTCTGAGGCTGTGATTGGCTGTCTGGACCTGGTGTTGAAGTGGTTTACTCTGCGCTTCTTTGACACCAACACTAGTGTGATCATGAAAACCCTGGAGTTCCTCAAGATGCTCTTCACCATGCTGAGCAGGAAAAACTA[C/A]CAGCTCAATGACTACGAGGCCTCGTCTTTCATTCCTTACCTGATCCTTAAGGTAGAATTTATCTACCTGAACATTAACTATGAAGACAATTTGTTGAGAAACGGCCTGACGGGGTCCTTTTTTTTGCTTTCTTGTCTCTGAGCAGGTTGGAGAGTCTAAAGATGTTGTGCGCAAAGATGTCCGTGCTATTTTGGCGATGCTGTGTAAAGTCTACGCAGCGAGCAAAGTATTCCCTTACCTTATGGATGGGACCAAATCAAAGAACTCAAAGCAAAGATCTGGTAAGTGTGGTTTCCTCAAACCTTTAGATGCTTTCTACTGTGTAATGTACATTTTATTGATTTATTTTTTCACTCTTTCCAGAATGTCTCGAGGAGCTTGGCTGCCTGATTGAGAACTTCGGTATGAATGTATGCCAACCGACTCCGGCCAAGGCTCTGAAAGAAATCGCTGTCCATATTGGAGACCGTGACACTACAGTCCGCAATGCTGCCCTTAAT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa457
Status:
Confirmed mutation in F2 line
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000045607 | Essential Splice Site | None | 134 | 9 | 19 |
| ENSDART00000123666 | Essential Splice Site | 435 | 990 | 11 | 21 |
| ENSDART00000127575 | Essential Splice Site | 1478 | 2033 | 34 | 44 |
Genomic Location (Zv9):
Chromosome 25 (position 5023978)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 25 | 13663470 |
| GRCz11 | 25 | 13759870 |
KASP Assay ID:
554-0385.1 (used for ordering genotyping assays)
KASP Sequence:
AATGCTGTTATATGAACATAATTAATATTTTTATGTGTCCATTTTCAACA[G/A]TCAAGCTCGGCAGCAGAACGCTCACTTGGAGCAGTCGGCTCCATCCATCC
Long Flanking Sequence:
CGCACTTACAGGATGTAAGTACTGCCGTACTGCTCACAAGGCACCTGACATCCTGGAGGGCTAGGGATCACAATGAAATATTAGAGATTATTAGATTGTACGGCTGATTGTGATGTCATATGAAATCATTCAAGATCATTTTTTACATAATTGGAGGTTTAAAAGAACAGTTTTGTTTGAAGTGGTAAGGTTGAAAAATGCCTTGGCTAGAAAAAAAAAATCAGTGTATCGTTGTTCATTTTAATGTATAAAAAAACAAGCAAGTTCAAGCTTTTTTCTGTTGAGTTATATTATATTAAATCTATCTACAATTAATCAATATCACCATTTTAAATATTACTTTCATATACTTGTTGTTGGAAGTGATTTATTTTAGTTCCCTTCTACTGATAATGAACAAGAATTCAGTCTTACTCATGTTCATGGCTGCTCTGTAAATAAGAGTATTGTAATGCTGTTATATGAACATAATTAATATTTTTATGTGTCCATTTTCAACA[G/A]TCAAGCTCGGCAGCAGAACGCTCACTTGGAGCAGTCGGCTCCATCCATCCCGAAAGAGTTTCAGCTGGATCTGGATGTCTTCGAGAACAACCACACGTGTGCCAGCGACATCCCTGACCTGGTGCAGCACAAACTGGATGAAGTTCTGGAGCCGGTCATGATTCCTGAGCGCAAGTATGAGTTCAGCACAACACAGCTAAATGGATTGTATGCTGAAATACTTCAGCATAGTCAATGCAATAGTGTATTGCTGCTGTTAAAGGAATTAAATATGTGTTTCTGCTGTTTTCAGAATTCATTCGGTCTCTCCTCATTTTGATGACATTCACAATAGCACTGCCTCCACTATCAACTTTGTCATCTCCCAGGTGGCTAGTGGAGACATTAACACCAGTATCCAGGCTTTGGCACAGGTGGGTTTAATTCCAACTCCCTCTTCATTGGATTTTAGTAATAAACAATTAACGTTTTAAGCAACAAGTGCTTTTTTTTATGTTTTT
Associated Phenotype:
This allele has been associated with this phenotype by genetic linkage analysis and may not be causal.
See FAQs for more info.
See FAQs for more info.
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Pharyngula:Prim-5 ZFS:0000029 |
brain ZFA:0000008 |
necrotic PATO:0000647 |
abnormal PATO:0000460 |