ZMP
irf6
Ensembl ID:
ZFIN ID:
Description:
interferon regulatory factor 6 [Source:RefSeq peptide;Acc:NP_956892]
Human Orthologue:
IRF6
Human Description:
interferon regulatory factor 6 [Source:HGNC Symbol;Acc:6121]
Mouse Orthologue:
Irf6
Mouse Description:
interferon regulatory factor 6 Gene [Source:MGI Symbol;Acc:MGI:1859211]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa19276 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa11387 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa19276
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000061535 | Nonsense | 259 | 492 | 6 | 8 |
| ENSDART00000063562 | Nonsense | 259 | 492 | 6 | 9 |
| ENSDART00000139501 | Nonsense | 43 | 161 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 2347534)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 1160382 |
| GRCz11 | 22 | 1177280 |
KASP Assay ID:
2261-6263.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTGTCTGCAGTGACGGATCTGGAGGTGCAGTTCTACTACCGCGGTAAA[G/T]AGGTGTGTCCCCCATTGACGGTCAGTAACCCGCAGGGCTGTCGTCTGTTT
Long Flanking Sequence:
AGCAGTGTGATTAAAAATGTAAGAAAAATGTTAGCATCATGCTAATTCACACTAACAAGGTAAACATTAGCTAGATAACTCACGCTAACATAGTATTATTGTATTTTAGCTCTGGTGAACTATGCTAGAAATATGTAAACATGCTAATTCATGCTATCACAGCCTAAAACATGCTAGCAAACATGTTATCTTTACCCTGAAATATGCCAAATTCATGCTACACACGTAAAAACTAACATCAACTTAAACATGTTAGCAAAATATGCTAACTGATGTAATCATAACATCAAAACATGCTAGCAAACATGTTAGAAGTGTTGACAACGTGCTAGTTAGTTAACACTGTGTTTGTTAGCAAAACATGTCAGAAATGTGCTAAAGCAACATGTAAATTCCTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCTCTCCGTGTATGTGTCTGCAGTGACGGATCTGGAGGTGCAGTTCTACTACCGCGGTAAA[G/T]AGGTGTGTCCCCCATTGACGGTCAGTAACCCGCAGGGCTGTCGTCTGTTTTACGGGGACCTGGGCCCCATAGTGAACCAAGAGGAGCTGTTCGGCCCCGTGAGCCTGGAGCAGGTGCGCTTCCCGCCCACAGAGCACATCGCTAACGATAAGCAGCGCGTGTTCACTAGCCGGCTGCTGGACGTGATGGACCGCGGGCTCATCCTGGAGGTCAGCGGGCACGACATCTACGCCGTGCGCCTCTGCCAGTGTAAGGTGTACTGGTCCGGTCCCTGCGCCCCCAACCCAAACGCTCCCAACCTGATCGAGCGCCAGCAAAAGGTCAAGCTCTTCTGCCTCGAGTCCTTTCTCAGCGGTGAGAGACTCTCATTATTCATATGATATGAGGAGGCAGGGATACAGCCGCCTAGGTCGCCTCTATGGACGCGCCGGCCCTGACTGTTGTTGGAGACCCTTACAACCAAAATATGACCCTATTTCATGTATAATATGGGCTCTTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11387
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000061535 | Nonsense | 342 | 492 | 6 | 8 |
| ENSDART00000063562 | Nonsense | 342 | 492 | 6 | 9 |
| ENSDART00000139501 | Nonsense | 126 | 161 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 2347785)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 1160633 |
| GRCz11 | 22 | 1177531 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCCTGGAGGTCAGCGGGCACGACATCTACGCCGTGCGCCTCTGCCAGTG[T/A]AAGGTGTACTGGTCCGGTCCCTGCGCCCCCAACCCAAACGCTCCCAACCY
Long Flanking Sequence:
GTTAGCAAAATATGCTAACTGATGTAATCATAACATCAAAACATGCTAGCAAACATGTTAGAAGTGTTGACAACGTGCTAGTTAGTTAACACTGTGTTTGTTAGCAAAACATGTCAGAAATGTGCTAAAGCAACATGTAAATTCCTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCTCTCCGTGTATGTGTCTGCAGTGACGGATCTGGAGGTGCAGTTCTACTACCGCGGTAAAGAGGTGTGTCCCCCATTGACGGTCAGTAACCCGCAGGGCTGTCGTCTGTTTTACGGGGACCTGGGCCCCATAGTGAACCAAGAGGAGCTGTTCGGCCCCGTGAGCCTGGAGCAGGTGCGCTTCCCGCCCACAGAGCACATCGCTAACGATAAGCAGCGCGTGTTCACTAGCCGGCTGCTGGACGTGATGGACCGCGGGCTCATCCTGGAGGTCAGCGGGCACGACATCTACGCCGTGCGCCTCTGCCAGTG[T/A]AAGGTGTACTGGTCCGGTCCCTGCGCCCCCAACCCAAACGCTCCCAACCTGATCGAGCGCCAGCAAAAGGTCAAGCTCTTCTGCCTCGAGTCCTTTCTCAGCGGTGAGAGACTCTCATTATTCATATGATATGAGGAGGCAGGGATACAGCCGCCTAGGTCGCCTCTATGGACGCGCCGGCCCTGACTGTTGTTGGAGACCCTTACAACCAAAATATGACCCTATTTCATGTATAATATGGGCTCTTTAAAACTATTTGTTTAAAATGGTAAAAGCAAATTTTGCTGCTGTGTGTTTGTTATGTCTGTGTTTATTCTGTGGTGTGTGTTTATTCTAATATGTGCTGTTGTGTGTGTGTGTGTGCGCAGGGGTGATCACTCATCAGCGTGGTCAGTCTTCTGATGCTCCTCTTTATGATATTCACTTGTGTTTTGGAGAGGAGTGGCCCGACGGTCGACCCCGAGAGCGCAAACTCATCATGGTGCAGGTAGGCCCACACA
Associated Phenotype:
Not determined