ZMP
zgc:56116
Ensembl ID:
ZFIN IDs:
Description:
PDZ and LIM domain 5 isoform 2 [Source:RefSeq peptide;Acc:NP_956490]
Human Orthologue:
PDLIM5
Human Description:
PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:17468]
Mouse Orthologue:
Pdlim5
Mouse Description:
PDZ and LIM domain 5 Gene [Source:MGI Symbol;Acc:MGI:1927489]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa11364 | Essential Splice Site | Available for shipment | Available now |
| sa34802 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11364
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000036090 | Essential Splice Site | 521 | 628 | 10 | 12 |
| ENSDART00000098750 | None | None | 197 | None | 7 |
Genomic Location (Zv9):
Chromosome 10 (position 1201734)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 1196456 |
| GRCz11 | 10 | 1191145 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGTTGGTCCACANGAAGAGTTGWTGCTAATCTTCAGCTTTATCTGCTAAC[A/T]GGAAGTCATCAATGCCCTGAAGCAAACCTGGCATGTGAACTGCTTCCTGT
Long Flanking Sequence:
ACACACCATTGCACCCTCAAACACACCCTCACATCCTCAATCACACCCTCAATCATGCCATCACACCCTCAAACACACAATCACACCGTCAAACACACTCTTGCACCCTCAATCACACCCTCACACCCTCAATCACACCCTCGCACCCTCAATCACACCCTCAATCACACAATTACAACCTCAATTAAATCATCATACTCTCAATCACACCATCACATCCTCAAATACACCATCACACCCTCAAACAAGGTGATAATGACATTTATATAGTCATAATATATGAAGATATATATTTAATAGTGTGATATTCACACACAATAAAATATTTTAGACTTTAAGACATAATTATACTTTTTAGGAGACACAAGGATAAAACCACACAACAATAAAAACAAATGTGTGTCCACGTTTAGTGTTTCTAGCCTGAGCAGCAGTGAGTAAAGATGCCAGTTGTTGGTCCACAGAAGAGTTGTTGCTAATCTTCAGCTTTATCTGCTAAC[A/T]GGAAGTCATCAATGCCCTGAAGCAAACCTGGCATGTGAACTGCTTCCTGTGTGCGTCCTGCAAACAACCCATCGGCAACAACACCTTCCACCTGGAGGACGGACAGCCGTACTGCGAGAAAGGTCCAGAAACGCACACAATACTCAAATATAATGATTTAGCTTCTACACAATTCATAAAAAATACTGTTCATTATGATTTCACACTAAATGAATCATTTGACACACTTTCCTCAACATTCTACACACAATCCCCCATAATGACATTGTGAAAAAAAGTTTTTCAAATTGTTACTAATTTATTAAAATAAAAAAGCTGAAAAGTCAGATCTACATTTCTACTAATAATAGTTATATCAGTAGGTACAATACTATGATAGGTACATTAGTTGGTACATTAGTTTTGTGCCTGAAGTCAGCTACTCGTGTTGTTTTACTGCAGTAAAATGATAATTAAGTGATGTTTCTGATGATATCTGTGCTGTGCTTGAAGTGTGAGCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa34802
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000036090 | Essential Splice Site | 561 | 628 | 10 | 12 |
| ENSDART00000098750 | None | None | 197 | None | 7 |
Genomic Location (Zv9):
Chromosome 10 (position 1201610)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 10 | 1196332 |
| GRCz11 | 10 | 1191021 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGCAACAACACCTTCCACCTGGAGGACGGACAGCCGTACTGCGAGAAAGG[T/A]CCAGAAACGCACACAATACTCAAATATAATGATTTAGCTTCTACACAATT
Long Flanking Sequence:
ACCCTCAATCACACCCTCGCACCCTCAATCACACCCTCAATCACACAATTACAACCTCAATTAAATCATCATACTCTCAATCACACCATCACATCCTCAAATACACCATCACACCCTCAAACAAGGTGATAATGACATTTATATAGTCATAATATATGAAGATATATATTTAATAGTGTGATATTCACACACAATAAAATATTTTAGACTTTAAGACATAATTATACTTTTTAGGAGACACAAGGATAAAACCACACAACAATAAAAACAAATGTGTGTCCACGTTTAGTGTTTCTAGCCTGAGCAGCAGTGAGTAAAGATGCCAGTTGTTGGTCCACAGAAGAGTTGTTGCTAATCTTCAGCTTTATCTGCTAACAGGAAGTCATCAATGCCCTGAAGCAAACCTGGCATGTGAACTGCTTCCTGTGTGCGTCCTGCAAACAACCCATCGGCAACAACACCTTCCACCTGGAGGACGGACAGCCGTACTGCGAGAAAGG[T/A]CCAGAAACGCACACAATACTCAAATATAATGATTTAGCTTCTACACAATTCATAAAAAATACTGTTCATTATGATTTCACACTAAATGAATCATTTGACACACTTTCCTCAACATTCTACACACAATCCCCCATAATGACATTGTGAAAAAAAGTTTTTCAAATTGTTACTAATTTATTAAAATAAAAAAGCTGAAAAGTCAGATCTACATTTCTACTAATAATAGTTATATCAGTAGGTACAATACTATGATAGGTACATTAGTTGGTACATTAGTTTTGTGCCTGAAGTCAGCTACTCGTGTTGTTTTACTGCAGTAAAATGATAATTAAGTGATGTTTCTGATGATATCTGTGCTGTGCTTGAAGTGTGAGCTCAGTGTTGTTGATTTTGCTGTGTTGTTTGGTCTTTATTATAGATTATTACTCCCTCTTCGGCACCGGCTGTCATGGATGTGACTTTCCCATTGAAGCAGGAGACAAGTTTCTGGAGGCTCTGGG
Associated Phenotype:
Not determined