Busch Lab

ZMP

si:dkey-230p4.1

Ensembl ID:
ENSDARG00000020834
ZFIN ID:
ZDB-GENE-081104-380
Description:
Novel protein with a Viral A-type inclusion protein repeat domain [Source:UniProtKB/TrEMBL;Acc:B0V3B
Human Orthologues:
AC104809.3, CEP250, CROCC
Human Descriptions:
centrosomal protein 250kDa [Source:HGNC Symbol;Acc:1859]
ciliary rootlet coiled-coil, rootletin [Source:HGNC Symbol;Acc:21299]
Mouse Orthologues:
Cep250, Crocc
Mouse Descriptions:
centrosomal protein 250 Gene [Source:MGI Symbol;Acc:MGI:108084]
ciliary rootlet coiled-coil, rootletin Gene [Source:MGI Symbol;Acc:MGI:3529431]

Alleles

There are 16 alleles of this gene:

Allele Name Consequence Status Availability
sa12127 Nonsense Available for shipment Available now
sa21446 Nonsense Available for shipment Available now
sa31705 Nonsense Available for shipment Available now
sa11150 Nonsense Available for shipment Available now
sa15179 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa12127
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102348 Nonsense 936 2775 18 22
ENSDART00000134484 Nonsense 324 327 6 6
ENSDART00000135797 None None 193 None 2
ENSDART00000139377 None None 233 None 7

The following transcripts of ENSDARG00000020834 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 13220240)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 12972805
GRCz11 9 12944008
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTTAAAAGAAAAAGAAGAGCTTTTGGACMATTTAGAAAAAAGAAACACA[G/T]AACTAGAGAAACTACAGACTAAATCTGCARCAGAACAGAAAKCGGCCGAR
Long Flanking Sequence:
TGGACACACTCACACAGACCAAAGATGTCTTGCAAGGTTGGTCAAGCTGTTTTAATATAAAACAAACCTCTTATTTTTGCCATTACCATTACTGATTTCATATTTTGGTGTAAGTTTGTAAATTAATAAAGTACAAATGTTTCTCTTGAATTTGTTTAGGAGAGATTCAATGTCTGCAGACAGACCTGGAGAGAGAGACCGCACAGAAAGAACGAGAATTACAAGAATCAATTGAGGAAAGAAGGAAGTTTGAAAGAGAGATAGAAAACTGGAAGTCGGAATGCAAGAAGTTTCAGAGAGACGTTGAACAAGAATCAGAAAATAGCAAAATACAAGCAGAAGAGAGCAAAACGGACAGAGAACGATGGCAAAAGGAGAGAGAATCTCTGAGCGCAGAGCTCGGCCAGAAAGATGGAGAAGTGGAGATACTGAGGAACAGGATTGATGGATTGTTAAAAGAAAAAGAAGAGCTTTTGGACCATTTAGAAAAAAGAAACACA[G/T]AACTAGAGAAACTACAGACTAAATCTGCAGCAGAACAGAAAGCGGCCGAGCTAAGGCTGAGAGGAGCATGTGATGAGGTTGAGAGATGGAAGGAGAGAGAAAATAAGGTTCAGAGAGAGAAAGAAGAGTTAAATCAGAAGTTTTTAGAAAGAGTAGAAAGAGAAAGTCAGAACCTCGAGATCACACAGAGAGAGAAGGCTAAGATGTCTGATCTAATGAAAAAGAAGGAAGATGAAATACGAAGAAGAGGAGAGGATATAGAAGAGTTGAAATTGAAACTCCAGTCCAACGAGAAAACAATTGAGAGTCTGGAAATAGAGTTACAACAGAAAGAGACCTTGGAGAGTAGAGTAGAAACCCTGGAGAAACTTAACACTCAACTGAAAGAGAAAAAACTTGACAAAATAAGAGAAAACGAAAGCAGACAAAAGAAAAGAGATGAGCAAGAAAGGGAGAAAGAAGTTAGGTGGAGGAGACAACTGGAACAGAAAGATGAAGGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21446
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102348 Nonsense 1236 2775 18 22
ENSDART00000134484 None None 327 None 6
ENSDART00000135797 None None 193 None 2
ENSDART00000139377 None None 233 None 7

The following transcripts of ENSDARG00000020834 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 13221140)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 12973705
GRCz11 9 12944908
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAGAGACTGATATTGAGCAGAAGAATGAACAGCTTGAACTTCTAAATGAG[C/T]AAATCTCACAGATAAAAGAGAGAGAAATTGAGAATCAAAAAGAGTTGGAC
Long Flanking Sequence:
ACAAAATAAGAGAAAACGAAAGCAGACAAAAGAAAAGAGATGAGCAAGAAAGGGAGAAAGAAGTTAGGTGGAGGAGACAACTGGAACAGAAAGATGAAGGCCTTATAGAGCTCAAAAGCAGAATTGATGAACTAATCGGAGAAAAAGAACATATCTCTTTACTCGTGGAAGAAAGAGAAAAAGATATTGAGCAATTGCAATCTACGCTGTCGACAGAAAAGAGAGCTCTTGAGCTGAGACTGAAAGAGGCAAGAGACAATGCAGAGTGGTGGAAGAGACGAGCTGGCAACATGGAGAAAGTGAAGGAGAGCGTAAATCGTGTTGCTGAAAGAGAGAAAACAGAACTGTCAGAGCTTCTTAGAGAAAGAGAGGAAGAGGTACAAAAGAGAGAAGAGGTGATCAGTGATCTTAAAAACAGAATTCAATCATTAGAGGTAATCATAGAGAAACTAGAGACTGATATTGAGCAGAAGAATGAACAGCTTGAACTTCTAAATGAG[C/T]AAATCTCACAGATAAAAGAGAGAGAAATTGAGAATCAAAAAGAGTTGGACAGGATGCAAGAAAATCTAAAGGAACAGGAGAAACAACTGAAAAGAGAATTAGACCATCTTAATATCAAAATGGCAGGAGTCATTCAAGAAAAAGAGGAGTTATTAGAAAGGATAGAGGAGAGAGATGGTGAGTTGACAGAATTACAAGTGAAATTCACTCAAGAACAGAGGATGTTTGAACAGAAGCTTAAAGCAGAACATGCAGAGGTGAACAGGTGCAAAGCCAAGATAGCAGAGATGGAACAAGACCAGGTGAACTTGAAGGAAAGGGATGAAGAGCAAAGGAAAAGACAAAAGATGGAAGAAAGATATAGGGAGCAGAAACAGACAGAAGAACTTGTTCAGAAGGACGTAGAGGTGAGGCAGTTGAAACTGAAGATTGAAGAACTGAACCAGGAGATTGAGCAGGACAGGAGGATAAGAATGGAACAACAAGAAGACCTTGAACAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31705
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102348 Nonsense 2075 2775 18 22
ENSDART00000134484 None None 327 None 6
ENSDART00000135797 None None 193 None 2
ENSDART00000139377 None None 233 None 7

The following transcripts of ENSDARG00000020834 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 13223658)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 12976223
GRCz11 9 12947426
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGAGATGAAACTCTTCGAGAGAGACGAGAGAAGGACAGAATAAGCTCTT[T/A]ATTGAGTGATGCCAAGGAAAGAAAGGAATCACTGTCTGTCCAGGTCGATT
Long Flanking Sequence:
GACCCAACTGACAGATGAAAAAATTGACAGGGAAAGACTGAAAGCCAGGCTTGAGGATCAAGCTACAGAAGTAACAAAACTGAAGGAGAAACTAAATAAAATGGTAGAAGATGAGAGAAAGTTATCACACCTTCTGCAGAACAGCCAAGTGGAGACTCAAATGCTTGAATCCAGGACAGAGAACCTCGAAGAGGAAAAACAACAATTGAAGAGGTCATTGACTCAGATTGAAGAAGAGAAGAGATGCCTGGAGACCCAACTGACAGATGAAAAAATTGATAGGGAAAGACTAAGAGCCAGGCTTGAGGATTTTCAGAAAGATCAACAAATCCTGTTTGAGGAGAAGATGGGACGTGCGGAGAAGCTTGGGTCTCGTGTAAGAGAACTGGAGGAGCAGAGAGATCATCTCTCGGCAGAGCTTCGACGGAAAGAGCGAGAGATGGAGGTTTTGAGAGATGAAACTCTTCGAGAGAGACGAGAGAAGGACAGAATAAGCTCTT[T/A]ATTGAGTGATGCCAAGGAAAGAAAGGAATCACTGTCTGTCCAGGTCGATTCTTTGCAAGAACAACTGGTTAGTCTGTCTAGATCTAAAGAGCAAACCAAGTTAAAGATCCAGGAGCAAAAAGAGCAGAACAAGGAGATGCGAGAGGGGCTAGTTGCTGGGCTTCAGGAGATGGCAACTTTGAAGGAACTGCTAGAAGAGAGTCATCGTGAAGGAGAGAGACTAAGGTCCATGATGCAGGAAAGGAAGGATGAGCTGGTACGAAGTAGAGAAGAAGGCATTAAGGTGGCACATATTGAAGCCAAAGATCTTCAACTAAAAGTCCAGATGTTAGAGAAGCAGAAACAGGAGCTTGAAACCACTCTTCAACTACAAGTGGAGCAACTTAAGAAGAAGAATGAGGAAGGGATGCAGGAGAAGGAACAATTGCAGCAAAGACAGGAAAAGTTGGAAGGAGAATTGATGGCTATGAAAAGCGTAAAGGAGCACAGAGAGGCTGAGC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11150
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102348 Nonsense 2217 2775 18 22
ENSDART00000134484 None None 327 None 6
ENSDART00000135797 None None 193 None 2
ENSDART00000139377 None None 233 None 7

The following transcripts of ENSDARG00000020834 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 13224084)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 12976649
GRCz11 9 12947852
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GGAGCAACTTAARAAGAAGAATGAGGAAGGGATGCAGGAGAAGGAACAAT[T/A]GCAGCAAAGACAGGAAAAGTTGGAAGRAGAATTGRTGGCTATGAAAAGCS
Long Flanking Sequence:
GAAAGAGCGAGAGATGGAGGTTTTGAGAGATGAAACTCTTCGAGAGAGACGAGAGAAGGACAGAATAAGCTCTTTATTGAGTGATGCCAAGGAAAGAAAGGAATCACTGTCTGTCCAGGTCGATTCTTTGCAAGAACAACTGGTTAGTCTGTCTAGATCTAAAGAGCAAACCAAGTTAAAGATCCAGGAGCAAAAAGAGCAGAACAAGGAGATGCGAGAGGGGCTAGTTGCTGGGCTTCAGGAGATGGCAACTTTGAAGGAACTGCTAGAAGAGAGTCATCGTGAAGGAGAGAGACTAAGGTCCATGATGCAGGAAAGGAAGGATGAGCTGGTACGAAGTAGAGAAGAAGGCATTAAGGTGGCACATATTGAAGCCAAAGATCTTCAACTAAAAGTCCAGATGTTAGAGAAGCAGAAACAGGAGCTTGAAACCACTCTTCAACTACAAGTGGAGCAACTTAAGAAGAAGAATGAGGAAGGGATGCAGGAGAAGGAACAAT[T/A]GCAGCAAAGACAGGAAAAGTTGGAAGGAGAATTGATGGCTATGAAAAGCGTAAAGGAGCACAGAGAGGCTGAGCTGACCAGAGCAAAGGCTAGATTGGACATTCTGGAAGATCAGAGGACTGAACTGAGCTCTTTGGCAGCAGAGAGGACCAAAGATGCAGAGGAACTGAGCAACAGATTCAGAGATCTGAGGCTGGAAGCTGACAGGCTGAGAGAGGACAGAATAAGAGAGAAGAACAACTGGGAGGAACTCAAAAGAGAAAACAAAGAAAAACAAAATGCCTTGGAGGAATTGGAGCTCCTTAGAAAAACTCTGATGGAAAAGGAAAAGGAGATGAAATTGGTTAAAGAGAAATATGAAAATGAGAAAAGAAGAAGCGAGAGATTTCAGCAAGGGGATGAACAGAATGTAAGACAAATTGAATTAGTTTCAGAAAGACTCAGGGATAAGGAAACTGAGTTAGAGAGTATTCGAGAAAAGGCGTACAAAGAACAATCAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa15179
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000102348 Nonsense 2276 2775 18 22
ENSDART00000134484 None None 327 None 6
ENSDART00000135797 None None 193 None 2
ENSDART00000139377 None None 233 None 7

The following transcripts of ENSDARG00000020834 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 13224260)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 12976825
GRCz11 9 12948028
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGAGCTCTTTGGCAGCAGAGAGGACCAAAGATGCAGAGGAACTRAGCAAC[A/T]GATTCAGAGATCTGAGGCTGGAAGCTGACAGGCTGAGAGAGGACAGAATA
Long Flanking Sequence:
TAAAGATCCAGGAGCAAAAAGAGCAGAACAAGGAGATGCGAGAGGGGCTAGTTGCTGGGCTTCAGGAGATGGCAACTTTGAAGGAACTGCTAGAAGAGAGTCATCGTGAAGGAGAGAGACTAAGGTCCATGATGCAGGAAAGGAAGGATGAGCTGGTACGAAGTAGAGAAGAAGGCATTAAGGTGGCACATATTGAAGCCAAAGATCTTCAACTAAAAGTCCAGATGTTAGAGAAGCAGAAACAGGAGCTTGAAACCACTCTTCAACTACAAGTGGAGCAACTTAAGAAGAAGAATGAGGAAGGGATGCAGGAGAAGGAACAATTGCAGCAAAGACAGGAAAAGTTGGAAGGAGAATTGATGGCTATGAAAAGCGTAAAGGAGCACAGAGAGGCTGAGCTGACCAGAGCAAAGGCTAGATTGGACATTCTGGAAGATCAGAGGACTGAACTGAGCTCTTTGGCAGCAGAGAGGACCAAAGATGCAGAGGAACTGAGCAAC[A/T]GATTCAGAGATCTGAGGCTGGAAGCTGACAGGCTGAGAGAGGACAGAATAAGAGAGAAGAACAACTGGGAGGAACTCAAAAGAGAAAACAAAGAAAAACAAAATGCCTTGGAGGAATTGGAGCTCCTTAGAAAAACTCTGATGGAAAAGGAAAAGGAGATGAAATTGGTTAAAGAGAAATATGAAAATGAGAAAAGAAGAAGCGAGAGATTTCAGCAAGGGGATGAACAGAATGTAAGACAAATTGAATTAGTTTCAGAAAGACTCAGGGATAAGGAAACTGAGTTAGAGAGTATTCGAGAAAAGGCGTACAAAGAACAATCAGCAAGACTTAGATTGCAGGATCAATTCGAAGATGAGAAAAGAGTTACCAAGAAATTGAGGGAAAAATTAGAAACCCTAGAGAAAGTGAAACAAGAGATGAAGACCAAGATGGAAAATGATATACGCTATTTTAGAGACTCTGAAAAGAAAAACAATGGTCTAAAGATGGATAGTGGG
Associated Phenotype:
Not determined