Busch Lab

ZMP

cspg5b

Ensembl ID:
ENSDARG00000070863
ZFIN ID:
ZDB-GENE-060503-368
Description:
chondroitin sulfate proteoglycan 5 (neuroglycan C) [Source:RefSeq peptide;Acc:NP_001038357]
Human Orthologue:
CSPG5
Human Description:
chondroitin sulfate proteoglycan 5 (neuroglycan C) [Source:HGNC Symbol;Acc:2467]
Mouse Orthologue:
Cspg5
Mouse Description:
chondroitin sulfate proteoglycan 5 Gene [Source:MGI Symbol;Acc:MGI:1352747]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa8522 Nonsense Mutation detected in F1 DNA Not yet available
sa11063 Nonsense Available for shipment Available now
sa16392 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa8522
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000108819 Nonsense 265 540 2 6
ENSDART00000140611 Nonsense 265 481 2 5

The following transcripts of ENSDARG00000070863 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 18901055)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19746290
GRCz11 19 19319243
KASP Assay ID:
2261-3171.1 (used for ordering genotyping assays)
KASP Sequence:
CCTCCAACACAGGGGTTGTTGATTATAGTGGATCTGGAGAAAGTTTACCC[G/T]GAGCAGCGAATGTRCTTGGCAACTCTGGTTGTCTTCTTGGATTTGTGCGT
Long Flanking Sequence:
CTTCTGAAAGGGAGCACCTTGTTGGTCTTACAATAGGTGGCATAGCTGCCCGGCTGCCCACTCTAGCTGAATCCCAAAAACGAGCACTGTTCCAGCTAGATTTTAATGAGGAGGGAATGCAAGACAGCGCACCACATTGGAAGAGCAATAGACTACAAGCGGATGGGACTTTGTTAGATCCAGTCACAAGTCCTCCTTCTGAGTCCAGTCATTCCAAACCAGAAGAAATCATCACAGTCAATTTTCACAGTCCTTCTCCTCAACTGGAGATCGTCCATGATCCTCCTGGTTTGGCTCAGGAGCTCCAGGGAGGAGATCCAACATCCTGGACTGATTTCTATGATTATCTGTCACCTGACTATTCACCAACTGAAGTGTATCTAGAGGAGAGCCAACCAACACCACCTGACATGGAAGATGAAAATGTTCCTTTCATTGCCAGTGCGGTTCCCTCCAACACAGGGGTTGTTGATTATAGTGGATCTGGAGAAAGTTTACCC[G/T]GAGCAGCGAATGTGCTTGGCAACTCTGGTTGTCTTCTTGGATTTGTGCGTAGAAACGGCACCTGTGTGTCACCGTGCGACATCTTTACCGGATACTGCTTCAATGGGGGTCGGTGTTACGTGGTTGATGGTATTGGTGCTTTTTGCCGGTAAGATGCACACATACAGCACATGTATGATAGCTACAGATATCTCATTGGGTCAATGATGGATTTAAATTGAGGAAAAAGTTTTCCACTCAATAAACTAAATTTCATTTATTCAAGCAAATAATCTTTGGTTGAACAACCTAACTAAATCAGTGAGGGATGCTTTCATGTTGCCTCATGAAGCTTTAAAGCTACAGTACAAATCCTTTGTTTTGAATCAGCATTTTAGACCATAAATGAAACTTATGCAGCTGCCTAGGGTCGGCCCAGCTCTTCACTTTCGTCCGCGACAACCCACCCAATCCTCACTTTCATCCGTGACACCCCATCAAACACCCATTTATCTATGCTT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa11063
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000108819 Nonsense 328 540 3 6
ENSDART00000140611 Nonsense 328 481 3 5

The following transcripts of ENSDARG00000070863 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 18891247)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19736482
GRCz11 19 19309435
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGTRTAGGTGCAACATTCAGGAGTATATCTGGAACAAGGGCTCCAGGTG[T/A]GAATCAGTCATTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGC
Long Flanking Sequence:
ATGAATATAACATAGTGTCCATGAGAGACAATAAATTTGACTATTCTAGCTGCCATTTTCAGTCTCAAATTTTTTTTTCTTTTTCTGAAAGTCTTGATATCGTTCAGCAACACTATCGATAAGCAATACTATTGTTTTATGAAGGATGTTATATACAGTCCTGTTTAAGGTGAAAAATATTGTGACCATAATAAAATGTAAATGAGTATTATTTATATATTGATATAATTCTTTTTTTTTTAAATATTCAGTTTATTCCAGTGATGACAGGAAAGTCATCAGTCAATTGATCTTTCAGAAAAAGTTCTAAAATGCAAATTTGGTGGTCAAGAAACATTTCTTATTGTTGCTGCTTAAAATGTTTGTGAAAACGCATTCTTTCTTTGTTTTATATATATTTATTTAATATAAAGTTCGAATAAAAAATTGTCTAACGTCTGTCTCTCTGGTTTGTATAGGTGCAACATTCAGGAGTATATCTGGAACAAGGGCTCCAGGTG[T/A]GAATCAGTCATTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGCCGCCATCATGTTGCTTCTCCTCTTCATGGTTATAGTGTTTTTCTCCAAGAGGCTGCATGTGCTTAAGACTGAAAACAGACGCCTTCGCAAGCACAGGTGAAACTCACACATAAACACACGACTGACGGCACATGCTGGACTTTAGTTTCACATTTGACTGTTTTAATGTTACCCGAGGTGAGCTGATACATTAGCATGCATTTAGTAGTACTTTTTGGATTACAATAAAATGTACAGTGTTAACAAAGGCTTTGAACACAGTGATATCACCCTTCTTTGCTGAAAGTAGGCCAATCTGACTGTGCAACACAAGAGAGAGAGAGAGAGAGTGACCTATATACTGTGCAGCCAAAGGCATTTAAACAGTCCAAGAGAGGGGTGAGATGGAGTGCAAAGAAGTGGAAGAGATAAAGGGAAGCGAGCATTGTGAAGAATATAAGATGACAACAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16392
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000108819 Nonsense 391 540 4 6
ENSDART00000140611 Nonsense 391 481 4 5

The following transcripts of ENSDARG00000070863 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 18884408)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19729643
GRCz11 19 19302596
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTCTTTCAGTAAGTACCGTCCAAAGTCGGAGCAGCACATTGATAACTTCT[C/A]GCTGTCCACTGTTGCAGAGGRCTCTCAGGCAAACGTAAGGAAACTGTGTG
Long Flanking Sequence:
AACAAAAGAAAGTAATAGCTACTGTACAAACAAACAACAAGCTAGAACAGGCAAGACAAAAAGCTCAGTAAAGATACAAGACAAGCACACATGGAACAAACCAGCAAATAAATGAGAAGACAGCACAATATACAGAACAAAGCACACGAAAGACAGGTAAAAACAATCAGGATAGCAAGGTCTAAATGAGAGGGCGGGATACTTGAAAACGAGGAGGAAAGACAAGAGGAACACATGGCCAACACAAATTAAGGCACAGCAATGTAAATAAGCACAGGACAACCAAGCAAACATTAAACACTGACTGGACAGACAAAACTGTCAGGTCAGGACCATGACAATAAATATAGCATACTACAGCGTTTCAAACATTCAGGCAACTCTTTCTCAAGGCAACATTAAGTTTGTCCCAATACGTTTTACTATGTAATCATATCTTGTTTTCTCTCTGTCTTTCAGTAAGTACCGTCCAAAGTCGGAGCAGCACATTGATAACTTCT[C/A]GCTGTCCACTGTTGCAGAGGGCTCTCAGGCAAACGTAAGGAAACTGTGTGACACCCCGACTAACCTCCCCCATGCTCGTGCTTTGGCTTACTATGATAACATTGTGTGTCAGGTAACTTTTCCTCTCCTTTCTTTCCCCTCTGTTTTCCACCATGCATGAGAACTGGAGGTATAAATTATTCACCCTGTCTCGATTTAGGTGGTATATTCTTCTTTTCTTGACACACTTCATGTGTGGAAGATCACACTTTTCCACTGTCATCATCATTATCATCATAATGAGAAATTCTCTTCATCCCTGTCTCTTTTCTGTGATTGTCGTCATTACCTCACATGCTCCCGAGGTCATGTGAGGTACTGCAGGCTGCATGAAGCATTGCGGAAACTGTATTATTTCATGTGGTTTCAAACATACTGATCGTATTAGTTAGTGGTTGTGAAGCGGGGTTGGGCAATCAGTGCAATGTTTTTCAAACAGCCGTACTTAAAGTGCAGTTTAA
Associated Phenotype:
Not determined