ZMP
cspg5b
Ensembl ID:
ZFIN ID:
Description:
chondroitin sulfate proteoglycan 5 (neuroglycan C) [Source:RefSeq peptide;Acc:NP_001038357]
Human Orthologue:
CSPG5
Human Description:
chondroitin sulfate proteoglycan 5 (neuroglycan C) [Source:HGNC Symbol;Acc:2467]
Mouse Orthologue:
Cspg5
Mouse Description:
chondroitin sulfate proteoglycan 5 Gene [Source:MGI Symbol;Acc:MGI:1352747]
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa11063 | Nonsense | Available for shipment | Available now |
sa16392 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa11063
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000108819 | Nonsense | 328 | 540 | 3 | 6 |
ENSDART00000140611 | Nonsense | 328 | 481 | 3 | 5 |
The following transcripts of ENSDARG00000070863 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 19 (position 18891247)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 19736482 |
GRCz11 | 19 | 19309435 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGTRTAGGTGCAACATTCAGGAGTATATCTGGAACAAGGGCTCCAGGTG[T/A]GAATCAGTCATTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGC
Long Flanking Sequence:
ATGAATATAACATAGTGTCCATGAGAGACAATAAATTTGACTATTCTAGCTGCCATTTTCAGTCTCAAATTTTTTTTTCTTTTTCTGAAAGTCTTGATATCGTTCAGCAACACTATCGATAAGCAATACTATTGTTTTATGAAGGATGTTATATACAGTCCTGTTTAAGGTGAAAAATATTGTGACCATAATAAAATGTAAATGAGTATTATTTATATATTGATATAATTCTTTTTTTTTTAAATATTCAGTTTATTCCAGTGATGACAGGAAAGTCATCAGTCAATTGATCTTTCAGAAAAAGTTCTAAAATGCAAATTTGGTGGTCAAGAAACATTTCTTATTGTTGCTGCTTAAAATGTTTGTGAAAACGCATTCTTTCTTTGTTTTATATATATTTATTTAATATAAAGTTCGAATAAAAAATTGTCTAACGTCTGTCTCTCTGGTTTGTATAGGTGCAACATTCAGGAGTATATCTGGAACAAGGGCTCCAGGTG[T/A]GAATCAGTCATTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGCCGCCATCATGTTGCTTCTCCTCTTCATGGTTATAGTGTTTTTCTCCAAGAGGCTGCATGTGCTTAAGACTGAAAACAGACGCCTTCGCAAGCACAGGTGAAACTCACACATAAACACACGACTGACGGCACATGCTGGACTTTAGTTTCACATTTGACTGTTTTAATGTTACCCGAGGTGAGCTGATACATTAGCATGCATTTAGTAGTACTTTTTGGATTACAATAAAATGTACAGTGTTAACAAAGGCTTTGAACACAGTGATATCACCCTTCTTTGCTGAAAGTAGGCCAATCTGACTGTGCAACACAAGAGAGAGAGAGAGAGAGTGACCTATATACTGTGCAGCCAAAGGCATTTAAACAGTCCAAGAGAGGGGTGAGATGGAGTGCAAAGAAGTGGAAGAGATAAAGGGAAGCGAGCATTGTGAAGAATATAAGATGACAACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa16392
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000108819 | Nonsense | 391 | 540 | 4 | 6 |
ENSDART00000140611 | Nonsense | 391 | 481 | 4 | 5 |
The following transcripts of ENSDARG00000070863 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 19 (position 18884408)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 19 | 19729643 |
GRCz11 | 19 | 19302596 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTCTTTCAGTAAGTACCGTCCAAAGTCGGAGCAGCACATTGATAACTTCT[C/A]GCTGTCCACTGTTGCAGAGGRCTCTCAGGCAAACGTAAGGAAACTGTGTG
Long Flanking Sequence:
AACAAAAGAAAGTAATAGCTACTGTACAAACAAACAACAAGCTAGAACAGGCAAGACAAAAAGCTCAGTAAAGATACAAGACAAGCACACATGGAACAAACCAGCAAATAAATGAGAAGACAGCACAATATACAGAACAAAGCACACGAAAGACAGGTAAAAACAATCAGGATAGCAAGGTCTAAATGAGAGGGCGGGATACTTGAAAACGAGGAGGAAAGACAAGAGGAACACATGGCCAACACAAATTAAGGCACAGCAATGTAAATAAGCACAGGACAACCAAGCAAACATTAAACACTGACTGGACAGACAAAACTGTCAGGTCAGGACCATGACAATAAATATAGCATACTACAGCGTTTCAAACATTCAGGCAACTCTTTCTCAAGGCAACATTAAGTTTGTCCCAATACGTTTTACTATGTAATCATATCTTGTTTTCTCTCTGTCTTTCAGTAAGTACCGTCCAAAGTCGGAGCAGCACATTGATAACTTCT[C/A]GCTGTCCACTGTTGCAGAGGGCTCTCAGGCAAACGTAAGGAAACTGTGTGACACCCCGACTAACCTCCCCCATGCTCGTGCTTTGGCTTACTATGATAACATTGTGTGTCAGGTAACTTTTCCTCTCCTTTCTTTCCCCTCTGTTTTCCACCATGCATGAGAACTGGAGGTATAAATTATTCACCCTGTCTCGATTTAGGTGGTATATTCTTCTTTTCTTGACACACTTCATGTGTGGAAGATCACACTTTTCCACTGTCATCATCATTATCATCATAATGAGAAATTCTCTTCATCCCTGTCTCTTTTCTGTGATTGTCGTCATTACCTCACATGCTCCCGAGGTCATGTGAGGTACTGCAGGCTGCATGAAGCATTGCGGAAACTGTATTATTTCATGTGGTTTCAAACATACTGATCGTATTAGTTAGTGGTTGTGAAGCGGGGTTGGGCAATCAGTGCAATGTTTTTCAAACAGCCGTACTTAAAGTGCAGTTTAA
Associated Phenotype:
Not determined