Busch Lab

ZMP

cspg5b

Ensembl ID:
ENSDARG00000070863
ZFIN ID:
ZDB-GENE-060503-368
Description:
chondroitin sulfate proteoglycan 5 (neuroglycan C) [Source:RefSeq peptide;Acc:NP_001038357]
Human Orthologue:
CSPG5
Human Description:
chondroitin sulfate proteoglycan 5 (neuroglycan C) [Source:HGNC Symbol;Acc:2467]
Mouse Orthologue:
Cspg5
Mouse Description:
chondroitin sulfate proteoglycan 5 Gene [Source:MGI Symbol;Acc:MGI:1352747]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa11063 Nonsense Available for shipment Available now
sa16392 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa11063
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000108819 Nonsense 328 540 3 6
ENSDART00000140611 Nonsense 328 481 3 5

The following transcripts of ENSDARG00000070863 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 18891247)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19736482
GRCz11 19 19309435
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTGTRTAGGTGCAACATTCAGGAGTATATCTGGAACAAGGGCTCCAGGTG[T/A]GAATCAGTCATTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGC
Long Flanking Sequence:
ATGAATATAACATAGTGTCCATGAGAGACAATAAATTTGACTATTCTAGCTGCCATTTTCAGTCTCAAATTTTTTTTTCTTTTTCTGAAAGTCTTGATATCGTTCAGCAACACTATCGATAAGCAATACTATTGTTTTATGAAGGATGTTATATACAGTCCTGTTTAAGGTGAAAAATATTGTGACCATAATAAAATGTAAATGAGTATTATTTATATATTGATATAATTCTTTTTTTTTTAAATATTCAGTTTATTCCAGTGATGACAGGAAAGTCATCAGTCAATTGATCTTTCAGAAAAAGTTCTAAAATGCAAATTTGGTGGTCAAGAAACATTTCTTATTGTTGCTGCTTAAAATGTTTGTGAAAACGCATTCTTTCTTTGTTTTATATATATTTATTTAATATAAAGTTCGAATAAAAAATTGTCTAACGTCTGTCTCTCTGGTTTGTATAGGTGCAACATTCAGGAGTATATCTGGAACAAGGGCTCCAGGTG[T/A]GAATCAGTCATTTCAGATTTCCAAGTGATGTGTATAGCCGTGGGTGGAGCCGCCATCATGTTGCTTCTCCTCTTCATGGTTATAGTGTTTTTCTCCAAGAGGCTGCATGTGCTTAAGACTGAAAACAGACGCCTTCGCAAGCACAGGTGAAACTCACACATAAACACACGACTGACGGCACATGCTGGACTTTAGTTTCACATTTGACTGTTTTAATGTTACCCGAGGTGAGCTGATACATTAGCATGCATTTAGTAGTACTTTTTGGATTACAATAAAATGTACAGTGTTAACAAAGGCTTTGAACACAGTGATATCACCCTTCTTTGCTGAAAGTAGGCCAATCTGACTGTGCAACACAAGAGAGAGAGAGAGAGAGTGACCTATATACTGTGCAGCCAAAGGCATTTAAACAGTCCAAGAGAGGGGTGAGATGGAGTGCAAAGAAGTGGAAGAGATAAAGGGAAGCGAGCATTGTGAAGAATATAAGATGACAACAG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa16392
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000108819 Nonsense 391 540 4 6
ENSDART00000140611 Nonsense 391 481 4 5

The following transcripts of ENSDARG00000070863 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 19 (position 18884408)
Other Location(s):
Assembly Chromosome Position
GRCz10 19 19729643
GRCz11 19 19302596
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTCTTTCAGTAAGTACCGTCCAAAGTCGGAGCAGCACATTGATAACTTCT[C/A]GCTGTCCACTGTTGCAGAGGRCTCTCAGGCAAACGTAAGGAAACTGTGTG
Long Flanking Sequence:
AACAAAAGAAAGTAATAGCTACTGTACAAACAAACAACAAGCTAGAACAGGCAAGACAAAAAGCTCAGTAAAGATACAAGACAAGCACACATGGAACAAACCAGCAAATAAATGAGAAGACAGCACAATATACAGAACAAAGCACACGAAAGACAGGTAAAAACAATCAGGATAGCAAGGTCTAAATGAGAGGGCGGGATACTTGAAAACGAGGAGGAAAGACAAGAGGAACACATGGCCAACACAAATTAAGGCACAGCAATGTAAATAAGCACAGGACAACCAAGCAAACATTAAACACTGACTGGACAGACAAAACTGTCAGGTCAGGACCATGACAATAAATATAGCATACTACAGCGTTTCAAACATTCAGGCAACTCTTTCTCAAGGCAACATTAAGTTTGTCCCAATACGTTTTACTATGTAATCATATCTTGTTTTCTCTCTGTCTTTCAGTAAGTACCGTCCAAAGTCGGAGCAGCACATTGATAACTTCT[C/A]GCTGTCCACTGTTGCAGAGGGCTCTCAGGCAAACGTAAGGAAACTGTGTGACACCCCGACTAACCTCCCCCATGCTCGTGCTTTGGCTTACTATGATAACATTGTGTGTCAGGTAACTTTTCCTCTCCTTTCTTTCCCCTCTGTTTTCCACCATGCATGAGAACTGGAGGTATAAATTATTCACCCTGTCTCGATTTAGGTGGTATATTCTTCTTTTCTTGACACACTTCATGTGTGGAAGATCACACTTTTCCACTGTCATCATCATTATCATCATAATGAGAAATTCTCTTCATCCCTGTCTCTTTTCTGTGATTGTCGTCATTACCTCACATGCTCCCGAGGTCATGTGAGGTACTGCAGGCTGCATGAAGCATTGCGGAAACTGTATTATTTCATGTGGTTTCAAACATACTGATCGTATTAGTTAGTGGTTGTGAAGCGGGGTTGGGCAATCAGTGCAATGTTTTTCAAACAGCCGTACTTAAAGTGCAGTTTAA
Associated Phenotype:
Not determined